Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06225

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,288,061	+				+0.2
1,288,061	+				-0.6
1,288,061	+				-0.4
1,288,061	+				-1.1
1,288,062	-				-2.6
1,288,062	-				-0.9
1,288,062	-				-1.7
1,288,062	-				-0.0
1,288,062	-				-1.9
1,288,062	-				-1.9
1,288,062	-				+0.6
1,288,065	+		DZA65_RS06220	0.10	-2.2
1,288,065	+		DZA65_RS06220	0.10	+0.7
1,288,065	+		DZA65_RS06220	0.10	-2.9
1,288,065	+		DZA65_RS06220	0.10	-2.6
1,288,065	+		DZA65_RS06220	0.10	-1.1
1,288,065	+		DZA65_RS06220	0.10	-1.2
1,288,066	-		DZA65_RS06220	0.10	+2.0
1,288,066	-		DZA65_RS06220	0.10	-0.8
1,288,066	-		DZA65_RS06220	0.10	-2.9
1,288,066	-		DZA65_RS06220	0.10	-0.3
1,288,066	-		DZA65_RS06220	0.10	-1.2
1,288,066	-		DZA65_RS06220	0.10	-3.2
1,288,066	-				+1.0
1,288,066	-		DZA65_RS06220	0.10	-1.3
1,288,066	-		DZA65_RS06220	0.10	-1.9
1,288,066	-		DZA65_RS06220	0.10	-1.5
1,288,066	-		DZA65_RS06220	0.10	-2.3
1,288,153	+		DZA65_RS06220	0.21	-1.6
1,288,154	-		DZA65_RS06220	0.21	-1.7
1,288,154	-		DZA65_RS06220	0.21	-1.7
1,288,214	+		DZA65_RS06220	0.28	-0.9
1,288,231	+		DZA65_RS06220	0.31	-3.5
1,288,231	+		DZA65_RS06220	0.31	+0.4
1,288,231	+		DZA65_RS06220	0.31	-1.0
1,288,232	-		DZA65_RS06220	0.31	-2.6
1,288,232	-		DZA65_RS06220	0.31	+0.1
1,288,232	-		DZA65_RS06220	0.31	-0.8
1,288,294	+		DZA65_RS06220	0.38	-2.5
1,288,294	+		DZA65_RS06220	0.38	-3.1
1,288,294	+		DZA65_RS06220	0.38	-1.2
1,288,294	+		DZA65_RS06220	0.38	+1.0
1,288,294	+		DZA65_RS06220	0.38	-1.1
1,288,294	+		DZA65_RS06220	0.38	-2.6
1,288,294	+		DZA65_RS06220	0.38	-1.3
1,288,294	+		DZA65_RS06220	0.38	-0.6
1,288,294	+		DZA65_RS06220	0.38	-0.0
1,288,295	-		DZA65_RS06220	0.38	-3.1
1,288,295	-		DZA65_RS06220	0.38	-1.3
1,288,295	-		DZA65_RS06220	0.38	-1.8
1,288,295	-		DZA65_RS06220	0.38	-0.9
1,288,295	-		DZA65_RS06220	0.38	-2.2
1,288,295	-		DZA65_RS06220	0.38	-1.6
1,288,295	-		DZA65_RS06220	0.38	-0.0
1,288,295	-		DZA65_RS06220	0.38	-0.5
1,288,295	-		DZA65_RS06220	0.38	-1.6
1,288,298	+		DZA65_RS06220	0.39	-2.0
1,288,298	+		DZA65_RS06220	0.39	-2.9
1,288,298	+		DZA65_RS06220	0.39	-2.9
1,288,298	+		DZA65_RS06220	0.39	-1.1
1,288,298	+		DZA65_RS06220	0.39	-1.0
1,288,298	+		DZA65_RS06220	0.39	-2.5
1,288,298	+		DZA65_RS06220	0.39	-1.5
1,288,298	+		DZA65_RS06220	0.39	-2.7
1,288,298	+		DZA65_RS06220	0.39	-0.8
1,288,298	+		DZA65_RS06220	0.39	-1.6
1,288,298	+		DZA65_RS06220	0.39	-1.7
1,288,299	-		DZA65_RS06220	0.39	-1.3
1,288,299	-		DZA65_RS06220	0.39	-1.0
1,288,299	-		DZA65_RS06220	0.39	-1.4
1,288,299	-		DZA65_RS06220	0.39	-1.0
1,288,299	-		DZA65_RS06220	0.39	-2.0
1,288,299	-		DZA65_RS06220	0.39	-2.8
1,288,299	-		DZA65_RS06220	0.39	-2.0
1,288,299	-		DZA65_RS06220	0.39	-0.6
1,288,299	-		DZA65_RS06220	0.39	-1.2
1,288,368	+		DZA65_RS06220	0.47	-0.2
1,288,421	+		DZA65_RS06220	0.54	-1.3
1,288,422	-		DZA65_RS06220	0.54	-2.2
1,288,422	-		DZA65_RS06220	0.54	+1.0
1,288,467	+		DZA65_RS06220	0.60	-2.0
1,288,467	+		DZA65_RS06220	0.60	-1.7
1,288,468	-		DZA65_RS06220	0.60	+0.9
1,288,490	+		DZA65_RS06220	0.62	-0.7
1,288,654	+		DZA65_RS06220	0.83	-1.1
1,288,654	+		DZA65_RS06220	0.83	-2.6
1,288,654	+		DZA65_RS06220	0.83	-2.2
1,288,654	+		DZA65_RS06220	0.83	-2.0
1,288,654	+		DZA65_RS06220	0.83	-1.1
1,288,654	+		DZA65_RS06220	0.83	-0.6
1,288,664	-		DZA65_RS06220	0.84	-1.0
1,288,670	-		DZA65_RS06220	0.85	-2.5
1,288,670	-		DZA65_RS06220	0.85	-1.5
1,288,675	+		DZA65_RS06220	0.85	-0.7
1,288,675	+		DZA65_RS06220	0.85	-1.5
1,288,675	+		DZA65_RS06220	0.85	-1.3
1,288,675	+		DZA65_RS06220	0.85	-2.1
1,288,676	-		DZA65_RS06220	0.85	-1.8
1,288,781	+				-2.9
1,288,821	+				+0.8
1,288,821	+				+0.3
1,288,822	-				-0.9
1,288,822	-				+0.8
1,288,888	+				-1.1
1,288,888	+				-0.3
1,288,888	+				+0.1
1,288,888	+				-0.4
1,288,889	-				+0.2
1,288,893	+				-0.6
1,288,893	+				-1.6
1,288,894	-				-0.7
1,288,916	+				-0.3
1,288,916	+				-0.6
1,288,917	-				+1.0
1,288,917	-				-0.2
1,288,922	+				+0.6
1,289,171	+				+0.4
1,289,193	+				+0.1
1,289,232	+				+0.3
1,289,232	+				+0.5
1,289,233	-				+1.0
1,289,233	-				+1.2
1,289,233	-				+1.6
1,289,584	-		DZA65_RS06225	0.19	-1.8
1,289,682	-		DZA65_RS06225	0.22	+1.2
1,289,682	-		DZA65_RS06225	0.22	+0.5
1,289,682	-		DZA65_RS06225	0.22	-1.3
1,289,682	-		DZA65_RS06225	0.22	-0.3
1,289,870	+		DZA65_RS06225	0.29	-0.8
1,289,871	-		DZA65_RS06225	0.29	+0.2
1,289,871	-		DZA65_RS06225	0.29	-0.8
1,290,121	+		DZA65_RS06225	0.38	-2.0
1,290,174	-		DZA65_RS06225	0.40	-1.3
1,290,198	+		DZA65_RS06225	0.40	+1.6
1,290,199	-		DZA65_RS06225	0.40	-1.1
1,290,228	+		DZA65_RS06225	0.41	+0.4
1,290,228	+		DZA65_RS06225	0.41	+0.1
1,290,228	+		DZA65_RS06225	0.41	-0.9
1,290,228	+		DZA65_RS06225	0.41	+0.2
1,290,229	-		DZA65_RS06225	0.41	-1.0
1,290,431	+		DZA65_RS06225	0.49	+0.4
1,290,431	+		DZA65_RS06225	0.49	+0.4
1,290,431	+		DZA65_RS06225	0.49	+0.5
1,290,432	-		DZA65_RS06225	0.49	-0.3
1,290,432	-		DZA65_RS06225	0.49	-0.4
1,290,432	-		DZA65_RS06225	0.49	+0.2
1,290,432	-		DZA65_RS06225	0.49	+0.6
1,290,432	-		DZA65_RS06225	0.49	+1.4
1,290,432	-		DZA65_RS06225	0.49	-0.1
1,290,525	-		DZA65_RS06225	0.52	+1.4
1,290,563	-		DZA65_RS06225	0.53	-1.2
1,290,738	+		DZA65_RS06225	0.60	+0.4
1,290,738	+		DZA65_RS06225	0.60	-0.5
1,290,739	-		DZA65_RS06225	0.60	-1.1
1,290,741	+		DZA65_RS06225	0.60	+0.1
1,290,741	+		DZA65_RS06225	0.60	+1.0
1,290,742	-		DZA65_RS06225	0.60	-2.0
1,290,799	-		DZA65_RS06225	0.62	+0.2
1,290,799	-		DZA65_RS06225	0.62	+0.8
1,290,799	-		DZA65_RS06225	0.62	+0.2
1,290,841	+		DZA65_RS06225	0.63	+0.6
1,290,841	+		DZA65_RS06225	0.63	-1.0
1,290,842	-		DZA65_RS06225	0.63	-0.1
1,290,882	+				+1.6
1,291,286	+		DZA65_RS06225	0.79	-0.4
1,291,286	+		DZA65_RS06225	0.79	-1.2
1,291,287	-		DZA65_RS06225	0.79	+0.1
1,291,287	-		DZA65_RS06225	0.79	-0.2
1,291,287	-		DZA65_RS06225	0.79	-1.3
1,291,287	-		DZA65_RS06225	0.79	+0.1
1,291,287	-		DZA65_RS06225	0.79	-0.9
1,291,330	+		DZA65_RS06225	0.81	-1.0
1,291,330	+		DZA65_RS06225	0.81	+1.0
1,291,330	+		DZA65_RS06225	0.81	+2.2
1,291,330	+		DZA65_RS06225	0.81	-0.4
1,291,330	+		DZA65_RS06225	0.81	-0.9
1,291,330	+		DZA65_RS06225	0.81	+0.1
1,291,331	-		DZA65_RS06225	0.81	+0.4
1,291,331	-		DZA65_RS06225	0.81	-1.6
1,291,331	-		DZA65_RS06225	0.81	+0.1
1,291,331	-		DZA65_RS06225	0.81	-2.3
1,291,331	-		DZA65_RS06225	0.81	-2.6
1,291,331	-		DZA65_RS06225	0.81	+0.1
1,291,331	-		DZA65_RS06225	0.81	-1.9
1,291,548	+				+2.6
1,291,549	-		DZA65_RS06225	0.88	-1.6
1,291,549	-		DZA65_RS06225	0.88	-1.2
1,291,571	-		DZA65_RS06225	0.89	-0.8
1,291,678	+				+0.4
1,291,758	+				+0.2
1,291,862	+				-0.5
1,291,863	-				+0.2
1,291,863	-				-1.6
1,291,863	-				-0.9
1,291,876	+				-0.0
1,291,876	+				+0.2
1,291,876	+				+0.5
1,291,876	+				-1.3
1,291,876	+				-0.0
1,291,876	+				+0.2
1,291,876	+				+0.2
1,291,876	+				+1.0
1,291,877	-				-0.5
1,291,877	-				-0.5
1,291,877	-				+0.2
1,291,877	-				-0.2
1,291,877	-				-1.6
1,291,879	+				-0.4
1,291,879	+				+0.5
1,291,879	+				+1.4
1,291,879	+				-0.4
1,291,879	+				+0.5
1,291,879	+				-0.1
1,291,879	+				+2.2
1,291,880	-				-0.2
1,291,880	-				-0.2
1,291,880	-				+1.6
1,291,883	-				+0.5
1,291,883	-				-0.4
1,291,883	-				-0.0
1,291,883	-				+0.2
1,291,940	+				+0.1
1,291,946	+				+0.2
1,291,946	+				+1.0
1,291,946	+				-0.1
1,291,946	+				+0.4
1,291,946	+				+1.0
1,291,946	+				+0.2
1,291,946	+				+1.0
1,291,947	-				+0.6
1,291,947	-				+2.0
1,291,947	-				-0.0
1,291,947	-				-0.1
1,291,953	+				-0.2
1,292,005	+				-0.6
1,292,006	-				-1.6
1,292,057	+		DZA65_RS06230	0.13	-0.9
1,292,057	+		DZA65_RS06230	0.13	+1.2
1,292,058	-		DZA65_RS06230	0.14	-0.6
1,292,058	-		DZA65_RS06230	0.14	+1.0
1,292,058	-		DZA65_RS06230	0.14	-0.0
1,292,114	+		DZA65_RS06230	0.27	-0.5
1,292,115	-		DZA65_RS06230	0.27	-0.5
1,292,115	-		DZA65_RS06230	0.27	-0.4
1,292,115	-		DZA65_RS06230	0.27	-0.0
1,292,128	+		DZA65_RS06230	0.30	-0.3
1,292,128	+		DZA65_RS06230	0.30	-0.4
1,292,128	+		DZA65_RS06230	0.30	-0.2
1,292,128	+				+1.3
1,292,129	-		DZA65_RS06230	0.30	+0.4
1,292,129	-		DZA65_RS06230	0.30	+0.6
1,292,129	-		DZA65_RS06230	0.30	-0.3
1,292,293	+		DZA65_RS06230	0.69	+1.0
1,292,293	+		DZA65_RS06230	0.69	-0.0
1,292,294	-		DZA65_RS06230	0.70	-1.9
1,292,294	-		DZA65_RS06230	0.70	+0.6
1,292,294	-		DZA65_RS06230	0.70	-1.2
1,292,294	-		DZA65_RS06230	0.70	+0.0
1,292,446	+				+1.5
1,292,446	+				+1.7
1,292,446	+				-0.5
1,292,446	+				-1.1
1,292,446	+				-1.0
1,292,465	+				-1.4
1,292,465	+				+0.2
1,292,465	+				+0.3
1,292,466	-				-2.2
1,292,466	-				-0.2
1,292,466	-				+0.2
1,292,466	-				+1.3
1,292,494	+				+0.4
1,292,494	+				-0.6
1,292,494	+				+1.6
1,292,494	+				-1.8
1,292,494	+				-0.0
1,292,494	+				+1.1
1,292,495	-				+1.5
1,292,495	-				-0.5
1,292,495	-				+1.0
1,292,495	-				+1.3
1,292,547	+				+1.2
1,292,547	+				-0.6
1,292,547	+				+1.0
1,292,547	+				+0.8
1,292,673	+		DZA65_RS06235	0.34	+0.6
1,292,673	+		DZA65_RS06235	0.34	-0.5
1,292,673	+		DZA65_RS06235	0.34	-0.6
1,292,673	+		DZA65_RS06235	0.34	+0.6
1,292,673	+		DZA65_RS06235	0.34	-0.3
1,292,673	+		DZA65_RS06235	0.34	-0.6
1,292,674	-		DZA65_RS06235	0.34	+0.4
1,292,674	-		DZA65_RS06235	0.34	+0.1
1,292,674	-		DZA65_RS06235	0.34	+1.1
1,292,674	-		DZA65_RS06235	0.34	+1.0
1,292,674	-		DZA65_RS06235	0.34	-0.3
1,292,674	-		DZA65_RS06235	0.34	-0.6
1,292,674	-		DZA65_RS06235	0.34	-0.4
1,292,676	+		DZA65_RS06235	0.34	+0.2
1,292,676	+				+2.0
1,292,676	+		DZA65_RS06235	0.34	-0.1
1,292,676	+		DZA65_RS06235	0.34	+1.0
1,292,676	+		DZA65_RS06235	0.34	-0.3
1,292,676	+		DZA65_RS06235	0.34	+0.4
1,292,676	+		DZA65_RS06235	0.34	-1.0
1,292,677	-		DZA65_RS06235	0.34	-0.2
1,292,677	-		DZA65_RS06235	0.34	-0.2
1,292,677	-		DZA65_RS06235	0.34	-0.4
1,292,677	-		DZA65_RS06235	0.34	-1.2
1,292,677	-		DZA65_RS06235	0.34	+1.4
1,292,677	-		DZA65_RS06235	0.34	-0.8
1,292,677	-		DZA65_RS06235	0.34	-1.2
1,292,677	-		DZA65_RS06235	0.34	+0.3
1,292,677	-		DZA65_RS06235	0.34	+1.1
1,292,677	-		DZA65_RS06235	0.34	-0.4