Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05170

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,063,103	+		DZA65_RS05155	0.39	+1.6
1,063,104	-		DZA65_RS05155	0.39	-0.1
1,063,118	+		DZA65_RS05155	0.41	-1.1
1,063,119	-		DZA65_RS05155	0.42	+0.0
1,063,156	-		DZA65_RS05155	0.47	-1.1
1,063,168	-		DZA65_RS05155	0.49	-0.5
1,063,168	-		DZA65_RS05155	0.49	-0.6
1,063,170	+		DZA65_RS05155	0.49	-0.7
1,063,170	+		DZA65_RS05155	0.49	+0.5
1,063,171	-		DZA65_RS05155	0.49	-0.2
1,063,171	-		DZA65_RS05155	0.49	-0.1
1,063,171	-		DZA65_RS05155	0.49	-0.5
1,063,184	-		DZA65_RS05155	0.51	+1.0
1,063,217	-		DZA65_RS05155	0.56	+0.1
1,063,226	+		DZA65_RS05155	0.57	-0.9
1,063,227	-		DZA65_RS05155	0.57	-1.5
1,063,227	-		DZA65_RS05155	0.57	+0.3
1,063,255	+		DZA65_RS05155	0.61	+1.1
1,063,255	+		DZA65_RS05155	0.61	-0.9
1,063,255	+		DZA65_RS05155	0.61	-2.3
1,063,255	+		DZA65_RS05155	0.61	-0.6
1,063,256	-		DZA65_RS05155	0.61	+0.3
1,063,256	-		DZA65_RS05155	0.61	+0.0
1,063,258	+		DZA65_RS05155	0.62	+0.1
1,063,259	-		DZA65_RS05155	0.62	-0.2
1,063,309	+		DZA65_RS05155	0.69	-0.4
1,063,309	+		DZA65_RS05155	0.69	+0.8
1,063,309	+		DZA65_RS05155	0.69	+0.3
1,063,309	+		DZA65_RS05155	0.69	-0.3
1,063,309	+		DZA65_RS05155	0.69	-0.1
1,063,309	+		DZA65_RS05155	0.69	-0.1
1,063,309	+		DZA65_RS05155	0.69	-0.8
1,063,309	+		DZA65_RS05155	0.69	-0.3
1,063,309	+		DZA65_RS05155	0.69	+0.4
1,063,309	+		DZA65_RS05155	0.69	+2.4
1,063,309	+		DZA65_RS05155	0.69	+0.1
1,063,309	+		DZA65_RS05155	0.69	-0.2
1,063,310	-		DZA65_RS05155	0.69	-1.6
1,063,310	-		DZA65_RS05155	0.69	+0.5
1,063,310	-		DZA65_RS05155	0.69	-0.8
1,063,310	-		DZA65_RS05155	0.69	+0.2
1,063,310	-		DZA65_RS05155	0.69	-0.7
1,063,310	-		DZA65_RS05155	0.69	-0.6
1,063,310	-		DZA65_RS05155	0.69	+0.1
1,063,310	-		DZA65_RS05155	0.69	+0.2
1,063,310	-				+1.8
1,063,310	-		DZA65_RS05155	0.69	-0.2
1,063,310	-		DZA65_RS05155	0.69	-0.7
1,063,310	-		DZA65_RS05155	0.69	-0.6
1,063,310	-		DZA65_RS05155	0.69	+0.3
1,063,310	-		DZA65_RS05155	0.69	-1.3
1,063,310	-		DZA65_RS05155	0.69	-0.9
1,063,311	+		DZA65_RS05155	0.69	+0.4
1,063,311	+		DZA65_RS05155	0.69	+1.0
1,063,404	-		DZA65_RS05155	0.83	-0.5
1,063,460	+				+0.1
1,063,461	-				+0.0
1,063,616	-				-0.4
1,063,702	-				-1.6
1,063,846	+		DZA65_RS05165	0.29	+0.6
1,063,861	+		DZA65_RS05165	0.34	+0.2
1,063,955	-		DZA65_RS05165	0.62	+0.5
1,064,149	+				-1.6
1,064,230	+		DZA65_RS05170	0.19	+0.5
1,064,230	+		DZA65_RS05170	0.19	-0.9
1,064,230	+		DZA65_RS05170	0.19	+0.0
1,064,231	-		DZA65_RS05170	0.19	+0.1
1,064,231	-		DZA65_RS05170	0.19	-0.9
1,064,231	-		DZA65_RS05170	0.19	-0.4
1,064,249	+		DZA65_RS05170	0.21	+0.6
1,064,294	-		DZA65_RS05170	0.27	-0.8
1,064,294	-		DZA65_RS05170	0.27	-1.4
1,064,305	-		DZA65_RS05170	0.29	-0.2
1,064,305	-		DZA65_RS05170	0.29	-0.3
1,064,344	-		DZA65_RS05170	0.34	-1.4
1,064,382	+		DZA65_RS05170	0.39	-0.6
1,064,467	+		DZA65_RS05170	0.50	-0.7
1,064,467	+		DZA65_RS05170	0.50	-0.6
1,064,467	+		DZA65_RS05170	0.50	-1.5
1,064,468	-		DZA65_RS05170	0.50	-0.3
1,064,468	-		DZA65_RS05170	0.50	+0.0
1,064,468	-		DZA65_RS05170	0.50	-0.8
1,064,526	+		DZA65_RS05170	0.58	+1.2
1,064,527	-		DZA65_RS05170	0.58	+0.9
1,064,554	+		DZA65_RS05170	0.61	-1.1
1,064,554	+		DZA65_RS05170	0.61	-0.7
1,064,554	+		DZA65_RS05170	0.61	+0.0
1,064,554	+		DZA65_RS05170	0.61	+0.1
1,064,554	+		DZA65_RS05170	0.61	+0.2
1,064,555	-		DZA65_RS05170	0.61	-0.0
1,064,555	-		DZA65_RS05170	0.61	+0.5
1,064,555	-		DZA65_RS05170	0.61	+0.0
1,064,555	-		DZA65_RS05170	0.61	+0.0
1,064,568	-		DZA65_RS05170	0.63	-0.1
1,064,615	+				+3.0
1,064,673	-		DZA65_RS05170	0.77	+0.1
1,064,834	+				-0.2
1,064,839	-				+0.6
1,064,867	+				+0.1
1,064,868	-				-0.9
1,065,089	+		DZA65_RS05175	0.41	+0.0
1,065,097	-		DZA65_RS05175	0.43	+0.2
1,065,105	-		DZA65_RS05175	0.44	-0.9
1,065,135	-		DZA65_RS05175	0.51	+0.0
1,065,151	+		DZA65_RS05175	0.55	-1.4
1,065,167	+		DZA65_RS05175	0.58	-1.4
1,065,168	-		DZA65_RS05175	0.58	-1.6
1,065,204	+				+1.6
1,065,310	+		DZA65_RS05175	0.90	-0.2
1,065,310	+		DZA65_RS05175	0.90	+0.3
1,065,310	+		DZA65_RS05175	0.90	-0.4
1,065,311	-				-2.1
1,065,324	-				-1.4
1,065,324	-				-0.0
1,065,338	+				-2.0
1,065,339	-				+0.5
1,065,362	-				+0.2
1,065,362	-				+0.6
1,065,401	-				+0.0
1,065,404	+				-2.3
1,065,404	+				+0.0
1,065,404	+				-0.1
1,065,404	+				-1.1
1,065,404	+				+0.8
1,065,409	+				-1.6
1,065,413	+				+1.2
1,065,414	-				+0.0
1,065,414	-				-1.7
1,065,417	+				+1.2
1,065,426	+				+0.3
1,065,426	+				-1.2
1,065,426	+				-0.6
1,065,426	+				-0.8
1,065,426	+				+0.8
1,065,426	+				+2.0
1,065,427	-				-0.6
1,065,427	-				-2.3
1,065,427	-				+0.3
1,065,427	-				-1.1
1,065,428	+				+0.3
1,065,428	+				-2.1
1,065,428	+				-0.2
1,065,429	-				+0.9
1,065,429	-				+1.5
1,065,433	+				+0.3
1,065,433	+				+0.4
1,065,434	-				-0.4
1,065,521	+		DZA65_RS05180	0.24	+2.0
1,065,522	-		DZA65_RS05180	0.24	-0.6
1,065,555	+		DZA65_RS05180	0.36	-0.1
1,065,556	-		DZA65_RS05180	0.36	-0.5
1,065,556	-		DZA65_RS05180	0.36	-0.9
1,065,575	+		DZA65_RS05180	0.43	+0.2
1,065,588	-		DZA65_RS05180	0.48	-1.1
1,065,588	-		DZA65_RS05180	0.48	-0.4
1,065,632	-				-0.6
1,065,632	-		DZA65_RS05180	0.64	-1.6
1,065,632	-		DZA65_RS05180	0.64	-0.6
1,065,671	+		DZA65_RS05180	0.78	+0.7
1,065,671	+		DZA65_RS05180	0.78	-0.5
1,065,671	+		DZA65_RS05180	0.78	-0.6
1,065,671	+		DZA65_RS05180	0.78	-0.0
1,065,671	+		DZA65_RS05180	0.78	+1.0
1,065,671	+		DZA65_RS05180	0.78	+0.8
1,065,672	-		DZA65_RS05180	0.78	-0.6
1,065,672	-		DZA65_RS05180	0.78	-1.0
1,065,672	-		DZA65_RS05180	0.78	+0.2
1,065,672	-		DZA65_RS05180	0.78	-0.2
1,065,672	-		DZA65_RS05180	0.78	-0.2
1,065,697	+		DZA65_RS05180	0.87	-0.9
1,065,698	-		DZA65_RS05180	0.88	+1.5
1,065,700	+		DZA65_RS05180	0.88	-0.5
1,065,700	+		DZA65_RS05180	0.88	-0.7
1,065,701	-		DZA65_RS05180	0.89	-1.5
1,065,701	-		DZA65_RS05180	0.89	-0.5
1,065,701	-		DZA65_RS05180	0.89	-1.1
1,065,742	-				+0.7
1,065,742	-				-0.7
1,065,801	+		DZA65_RS05185	0.30	-1.7
1,065,801	+		DZA65_RS05185	0.30	+1.2
1,065,801	+		DZA65_RS05185	0.30	-2.0
1,065,801	+		DZA65_RS05185	0.30	-0.1
1,065,801	+		DZA65_RS05185	0.30	-0.1
1,065,801	+		DZA65_RS05185	0.30	+0.2
1,065,801	+		DZA65_RS05185	0.30	-0.1
1,065,802	-		DZA65_RS05185	0.31	-0.2
1,065,802	-		DZA65_RS05185	0.31	+0.0
1,065,825	+		DZA65_RS05185	0.43	-0.6
1,065,825	+		DZA65_RS05185	0.43	-1.3
1,065,825	+		DZA65_RS05185	0.43	-0.5
1,065,825	+		DZA65_RS05185	0.43	+1.5
1,065,826	-		DZA65_RS05185	0.44	-0.2