Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02650 and DZA65_RS02655 are separated by 549 nucleotides DZA65_RS02655 and DZA65_RS02660 are separated by 12 nucleotides
DZA65_RS02650: DZA65_RS02650 - extracellular solute-binding protein, at 567,848 to 569,176
_RS02650
DZA65_RS02655: DZA65_RS02655 - GNAT family N-acetyltransferase, at 569,726 to 570,328
_RS02655
DZA65_RS02660: DZA65_RS02660 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 570,341 to 571,426
_RS02660
Position (kb) 569
570
571 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.731 kb on + strand, within DZA65_RS02650 at 568.732 kb on - strand, within DZA65_RS02650 at 568.732 kb on - strand, within DZA65_RS02650 at 568.732 kb on - strand, within DZA65_RS02650 at 568.734 kb on - strand, within DZA65_RS02650 at 568.815 kb on + strand, within DZA65_RS02650 at 568.816 kb on - strand, within DZA65_RS02650 at 568.828 kb on - strand, within DZA65_RS02650 at 568.938 kb on - strand, within DZA65_RS02650 at 568.944 kb on - strand, within DZA65_RS02650 at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.055 kb on + strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.056 kb on - strand at 569.177 kb on - strand at 569.185 kb on + strand at 569.186 kb on - strand at 569.186 kb on - strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.191 kb on + strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.192 kb on - strand at 569.212 kb on + strand at 569.212 kb on + strand at 569.212 kb on + strand at 569.212 kb on + strand at 569.213 kb on - strand at 569.213 kb on - strand at 569.213 kb on - strand at 569.213 kb on - strand at 569.267 kb on + strand at 569.267 kb on + strand at 569.267 kb on + strand at 569.268 kb on - strand at 569.297 kb on + strand at 569.317 kb on + strand at 569.427 kb on + strand at 569.427 kb on + strand at 569.428 kb on - strand at 569.428 kb on - strand at 569.431 kb on - strand at 569.431 kb on - strand at 569.431 kb on - strand at 569.435 kb on + strand at 569.435 kb on + strand at 569.437 kb on + strand at 569.488 kb on + strand at 569.488 kb on + strand at 569.508 kb on + strand at 569.508 kb on + strand at 569.580 kb on + strand at 569.702 kb on + strand at 569.703 kb on - strand at 569.725 kb on + strand at 569.725 kb on + strand at 569.725 kb on + strand at 569.726 kb on - strand at 569.726 kb on - strand at 569.726 kb on - strand at 569.726 kb on - strand at 569.726 kb on - strand at 569.726 kb on - strand at 569.783 kb on + strand at 569.834 kb on + strand, within DZA65_RS02655 at 569.835 kb on - strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.876 kb on + strand, within DZA65_RS02655 at 569.877 kb on - strand, within DZA65_RS02655 at 569.877 kb on - strand, within DZA65_RS02655 at 569.877 kb on - strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.882 kb on + strand, within DZA65_RS02655 at 569.883 kb on - strand, within DZA65_RS02655 at 570.124 kb on + strand, within DZA65_RS02655 at 570.124 kb on + strand, within DZA65_RS02655 at 570.124 kb on + strand, within DZA65_RS02655 at 570.124 kb on + strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.125 kb on - strand, within DZA65_RS02655 at 570.127 kb on + strand, within DZA65_RS02655 at 570.128 kb on - strand, within DZA65_RS02655 at 570.219 kb on + strand, within DZA65_RS02655 at 570.220 kb on - strand, within DZA65_RS02655 at 570.220 kb on - strand, within DZA65_RS02655 at 570.263 kb on + strand, within DZA65_RS02655 at 570.308 kb on + strand at 570.308 kb on + strand at 570.308 kb on + strand at 570.308 kb on + strand at 570.308 kb on + strand at 570.308 kb on + strand at 570.308 kb on + strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.309 kb on - strand at 570.340 kb on + strand at 570.341 kb on - strand at 570.377 kb on + strand at 570.389 kb on - strand at 570.389 kb on - strand at 570.538 kb on + strand, within DZA65_RS02660 at 570.538 kb on + strand, within DZA65_RS02660 at 570.539 kb on - strand, within DZA65_RS02660 at 570.575 kb on - strand, within DZA65_RS02660 at 570.607 kb on + strand, within DZA65_RS02660 at 570.607 kb on + strand, within DZA65_RS02660 at 570.607 kb on + strand, within DZA65_RS02660 at 570.608 kb on - strand, within DZA65_RS02660 at 570.608 kb on - strand, within DZA65_RS02660 at 570.727 kb on + strand, within DZA65_RS02660 at 570.727 kb on + strand, within DZA65_RS02660 at 570.727 kb on + strand, within DZA65_RS02660 at 570.728 kb on - strand, within DZA65_RS02660 at 570.728 kb on - strand, within DZA65_RS02660 at 570.765 kb on + strand, within DZA65_RS02660 at 570.784 kb on + strand, within DZA65_RS02660 at 570.784 kb on + strand, within DZA65_RS02660 at 570.786 kb on + strand, within DZA65_RS02660 at 570.786 kb on + strand, within DZA65_RS02660 at 570.786 kb on + strand, within DZA65_RS02660 at 570.786 kb on + strand, within DZA65_RS02660 at 570.786 kb on + strand, within DZA65_RS02660 at 570.787 kb on - strand, within DZA65_RS02660 at 570.859 kb on + strand, within DZA65_RS02660 at 570.868 kb on - strand, within DZA65_RS02660 at 570.868 kb on - strand at 570.896 kb on - strand, within DZA65_RS02660 at 570.896 kb on - strand, within DZA65_RS02660 at 570.905 kb on + strand, within DZA65_RS02660 at 570.905 kb on + strand, within DZA65_RS02660 at 570.906 kb on - strand, within DZA65_RS02660 at 570.906 kb on - strand, within DZA65_RS02660 at 570.931 kb on + strand, within DZA65_RS02660 at 570.932 kb on - strand, within DZA65_RS02660 at 570.932 kb on - strand, within DZA65_RS02660 at 570.932 kb on - strand, within DZA65_RS02660 at 570.932 kb on - strand, within DZA65_RS02660 at 571.002 kb on + strand, within DZA65_RS02660 at 571.002 kb on + strand, within DZA65_RS02660 at 571.002 kb on + strand, within DZA65_RS02660 at 571.004 kb on + strand, within DZA65_RS02660 at 571.004 kb on + strand, within DZA65_RS02660 at 571.004 kb on + strand, within DZA65_RS02660 at 571.004 kb on + strand, within DZA65_RS02660 at 571.004 kb on + strand, within DZA65_RS02660 at 571.005 kb on - strand, within DZA65_RS02660 at 571.005 kb on - strand, within DZA65_RS02660 at 571.005 kb on - strand, within DZA65_RS02660 at 571.005 kb on - strand, within DZA65_RS02660 at 571.039 kb on + strand, within DZA65_RS02660 at 571.057 kb on + strand, within DZA65_RS02660 at 571.057 kb on + strand, within DZA65_RS02660 at 571.058 kb on - strand, within DZA65_RS02660 at 571.179 kb on + strand, within DZA65_RS02660 at 571.179 kb on + strand, within DZA65_RS02660 at 571.179 kb on + strand, within DZA65_RS02660 at 571.179 kb on + strand, within DZA65_RS02660 at 571.180 kb on - strand, within DZA65_RS02660 at 571.180 kb on - strand, within DZA65_RS02660 at 571.180 kb on - strand, within DZA65_RS02660 at 571.180 kb on - strand, within DZA65_RS02660 at 571.180 kb on - strand, within DZA65_RS02660 at 571.210 kb on + strand, within DZA65_RS02660 at 571.273 kb on + strand, within DZA65_RS02660 at 571.273 kb on + strand, within DZA65_RS02660 at 571.274 kb on - strand, within DZA65_RS02660 at 571.274 kb on - strand, within DZA65_RS02660 at 571.280 kb on + strand, within DZA65_RS02660 at 571.281 kb on - strand, within DZA65_RS02660 at 571.281 kb on - strand, within DZA65_RS02660 at 571.281 kb on - strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.284 kb on + strand, within DZA65_RS02660 at 571.285 kb on - strand, within DZA65_RS02660 at 571.285 kb on - strand, within DZA65_RS02660 at 571.285 kb on - strand, within DZA65_RS02660 at 571.285 kb on - strand, within DZA65_RS02660 at 571.285 kb on - strand, within DZA65_RS02660
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 568,731 + DZA65_RS02650 0.66 +0.2 568,731 + DZA65_RS02650 0.66 -0.2 568,731 + DZA65_RS02650 0.66 -1.8 568,731 + DZA65_RS02650 0.66 -0.3 568,731 + DZA65_RS02650 0.66 -0.4 568,731 + DZA65_RS02650 0.66 +0.5 568,731 + DZA65_RS02650 0.66 +0.1 568,732 - DZA65_RS02650 0.67 -0.5 568,732 - DZA65_RS02650 0.67 +0.6 568,732 - DZA65_RS02650 0.67 +0.2 568,734 - DZA65_RS02650 0.67 -0.1 568,815 + DZA65_RS02650 0.73 -0.1 568,816 - DZA65_RS02650 0.73 -1.4 568,828 - DZA65_RS02650 0.74 -0.4 568,938 - DZA65_RS02650 0.82 -1.8 568,944 - DZA65_RS02650 0.82 -1.1 569,055 + -0.0 569,055 + +0.3 569,055 + +0.3 569,055 + -1.0 569,055 + -0.6 569,055 + -0.8 569,055 + +0.2 569,055 + +1.2 569,055 + -1.1 569,055 + -0.2 569,055 + +0.2 569,055 + +0.2 569,055 + -0.5 569,056 - +0.2 569,056 - +1.2 569,056 - -1.6 569,056 - -0.2 569,056 - -2.4 569,056 - +0.7 569,056 - -0.2 569,056 - -0.0 569,056 - +0.2 569,056 - +1.9 569,056 - +0.3 569,056 - -0.3 569,056 - -2.4 569,056 - -0.8 569,177 - -1.5 569,185 + -1.3 569,186 - +0.3 569,186 - -0.6 569,191 + -0.1 569,191 + +0.6 569,191 + +0.5 569,191 + +0.5 569,191 + +0.6 569,191 + +1.3 569,191 + +0.4 569,191 + +0.4 569,191 + -0.0 569,191 + +0.2 569,191 + +0.1 569,191 + +0.1 569,191 + +0.2 569,191 + -0.7 569,191 + -0.4 569,191 + -0.1 569,192 - -0.1 569,192 - +0.2 569,192 - -0.4 569,192 - -0.0 569,192 - +0.1 569,192 - -0.3 569,192 - -0.9 569,192 - -0.5 569,192 - +0.1 569,192 - -0.0 569,192 - +1.2 569,192 - -0.4 569,192 - -0.1 569,192 - +0.8 569,192 - +0.7 569,192 - +0.5 569,192 - -0.9 569,192 - +0.3 569,212 + +0.8 569,212 + +1.2 569,212 + +0.6 569,212 + -0.5 569,213 - +1.5 569,213 - +0.1 569,213 - +0.9 569,213 - +0.2 569,267 + +0.3 569,267 + -0.0 569,267 + -0.7 569,268 - -2.0 569,297 + -0.2 569,317 + +2.0 569,427 + -1.8 569,427 + +0.6 569,428 - -0.1 569,428 - +0.1 569,431 - +0.6 569,431 - +0.8 569,431 - +0.2 569,435 + +0.5 569,435 + -1.1 569,437 + +0.8 569,488 + +0.1 569,488 + +0.3 569,508 + +0.8 569,508 + +0.3 569,580 + +1.7 569,702 + +0.4 569,703 - +0.3 569,725 + +0.3 569,725 + +0.9 569,725 + -0.4 569,726 - -0.4 569,726 - -1.0 569,726 - +0.5 569,726 - -0.5 569,726 - -0.6 569,726 - +1.1 569,783 + +0.1 569,834 + DZA65_RS02655 0.18 +1.0 569,835 - DZA65_RS02655 0.18 -1.2 569,876 + DZA65_RS02655 0.25 +0.0 569,876 + DZA65_RS02655 0.25 +0.1 569,876 + DZA65_RS02655 0.25 -0.4 569,876 + DZA65_RS02655 0.25 +0.4 569,876 + DZA65_RS02655 0.25 +0.2 569,876 + DZA65_RS02655 0.25 +1.0 569,877 - DZA65_RS02655 0.25 -0.0 569,877 - DZA65_RS02655 0.25 -0.9 569,877 - DZA65_RS02655 0.25 +0.7 569,882 + DZA65_RS02655 0.26 +0.1 569,882 + DZA65_RS02655 0.26 +0.6 569,882 + DZA65_RS02655 0.26 -0.7 569,882 + DZA65_RS02655 0.26 +0.1 569,882 + DZA65_RS02655 0.26 +0.3 569,882 + DZA65_RS02655 0.26 -0.4 569,882 + DZA65_RS02655 0.26 +0.4 569,883 - DZA65_RS02655 0.26 -0.1 570,124 + DZA65_RS02655 0.66 -0.7 570,124 + DZA65_RS02655 0.66 -0.9 570,124 + DZA65_RS02655 0.66 +0.2 570,124 + DZA65_RS02655 0.66 +1.8 570,125 - DZA65_RS02655 0.66 -0.6 570,125 - DZA65_RS02655 0.66 -0.3 570,125 - DZA65_RS02655 0.66 +0.3 570,125 - DZA65_RS02655 0.66 -1.4 570,125 - DZA65_RS02655 0.66 +0.5 570,125 - DZA65_RS02655 0.66 +0.2 570,125 - DZA65_RS02655 0.66 -0.4 570,125 - DZA65_RS02655 0.66 +0.8 570,127 + DZA65_RS02655 0.67 -0.3 570,128 - DZA65_RS02655 0.67 -0.5 570,219 + DZA65_RS02655 0.82 +0.0 570,220 - DZA65_RS02655 0.82 -0.2 570,220 - DZA65_RS02655 0.82 +0.0 570,263 + DZA65_RS02655 0.89 +0.6 570,308 + -0.5 570,308 + -1.2 570,308 + -1.1 570,308 + +0.3 570,308 + +0.5 570,308 + +0.7 570,308 + +0.8 570,309 - -0.2 570,309 - +0.7 570,309 - -0.3 570,309 - +0.7 570,309 - -2.5 570,309 - -0.2 570,309 - +0.2 570,309 - -0.1 570,309 - +0.2 570,340 + -1.8 570,341 - -1.4 570,377 + -2.3 570,389 - -0.1 570,389 - -0.4 570,538 + DZA65_RS02660 0.18 +0.3 570,538 + DZA65_RS02660 0.18 -0.4 570,539 - DZA65_RS02660 0.18 -0.3 570,575 - DZA65_RS02660 0.22 +1.3 570,607 + DZA65_RS02660 0.24 -0.4 570,607 + DZA65_RS02660 0.24 +1.2 570,607 + DZA65_RS02660 0.24 +0.1 570,608 - DZA65_RS02660 0.25 -1.4 570,608 - DZA65_RS02660 0.25 +0.7 570,727 + DZA65_RS02660 0.36 -0.1 570,727 + DZA65_RS02660 0.36 -0.5 570,727 + DZA65_RS02660 0.36 -0.4 570,728 - DZA65_RS02660 0.36 +1.0 570,728 - DZA65_RS02660 0.36 +1.0 570,765 + DZA65_RS02660 0.39 -1.4 570,784 + DZA65_RS02660 0.41 +0.5 570,784 + DZA65_RS02660 0.41 +0.4 570,786 + DZA65_RS02660 0.41 -0.0 570,786 + DZA65_RS02660 0.41 -0.2 570,786 + DZA65_RS02660 0.41 -0.6 570,786 + DZA65_RS02660 0.41 -0.9 570,786 + DZA65_RS02660 0.41 +0.5 570,787 - DZA65_RS02660 0.41 +0.7 570,859 + DZA65_RS02660 0.48 +0.0 570,868 - DZA65_RS02660 0.49 -1.3 570,868 - -0.4 570,896 - DZA65_RS02660 0.51 -1.0 570,896 - DZA65_RS02660 0.51 -0.9 570,905 + DZA65_RS02660 0.52 -2.1 570,905 + DZA65_RS02660 0.52 -0.8 570,906 - DZA65_RS02660 0.52 +0.1 570,906 - DZA65_RS02660 0.52 -0.4 570,931 + DZA65_RS02660 0.54 +0.6 570,932 - DZA65_RS02660 0.54 -0.4 570,932 - DZA65_RS02660 0.54 -0.5 570,932 - DZA65_RS02660 0.54 -0.2 570,932 - DZA65_RS02660 0.54 -0.2 571,002 + DZA65_RS02660 0.61 +0.2 571,002 + DZA65_RS02660 0.61 -0.5 571,002 + DZA65_RS02660 0.61 +1.8 571,004 + DZA65_RS02660 0.61 -0.8 571,004 + DZA65_RS02660 0.61 +0.2 571,004 + DZA65_RS02660 0.61 +4.2 571,004 + DZA65_RS02660 0.61 +0.9 571,004 + DZA65_RS02660 0.61 +1.5 571,005 - DZA65_RS02660 0.61 -0.8 571,005 - DZA65_RS02660 0.61 -0.7 571,005 - DZA65_RS02660 0.61 -0.8 571,005 - DZA65_RS02660 0.61 -0.7 571,039 + DZA65_RS02660 0.64 +0.2 571,057 + DZA65_RS02660 0.66 -0.1 571,057 + DZA65_RS02660 0.66 -1.3 571,058 - DZA65_RS02660 0.66 +0.5 571,179 + DZA65_RS02660 0.77 -1.7 571,179 + DZA65_RS02660 0.77 +0.8 571,179 + DZA65_RS02660 0.77 -0.3 571,179 + DZA65_RS02660 0.77 -0.0 571,180 - DZA65_RS02660 0.77 -1.7 571,180 - DZA65_RS02660 0.77 +0.6 571,180 - DZA65_RS02660 0.77 -1.3 571,180 - DZA65_RS02660 0.77 +0.8 571,180 - DZA65_RS02660 0.77 -0.4 571,210 + DZA65_RS02660 0.80 -2.6 571,273 + DZA65_RS02660 0.86 -0.6 571,273 + DZA65_RS02660 0.86 -1.5 571,274 - DZA65_RS02660 0.86 -1.4 571,274 - DZA65_RS02660 0.86 -0.2 571,280 + DZA65_RS02660 0.86 +0.7 571,281 - DZA65_RS02660 0.87 -0.4 571,281 - DZA65_RS02660 0.87 -0.5 571,281 - DZA65_RS02660 0.87 -1.3 571,284 + DZA65_RS02660 0.87 -1.6 571,284 + DZA65_RS02660 0.87 +1.0 571,284 + DZA65_RS02660 0.87 -0.6 571,284 + DZA65_RS02660 0.87 +1.2 571,284 + DZA65_RS02660 0.87 -0.5 571,284 + DZA65_RS02660 0.87 +0.7 571,284 + DZA65_RS02660 0.87 +0.4 571,284 + DZA65_RS02660 0.87 -0.3 571,285 - DZA65_RS02660 0.87 +1.9 571,285 - DZA65_RS02660 0.87 -1.6 571,285 - DZA65_RS02660 0.87 +0.1 571,285 - DZA65_RS02660 0.87 +0.0 571,285 - DZA65_RS02660 0.87 -1.1
Or see this region's nucleotide sequence