Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22185

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,797,106	+				-1.5
4,797,166	+				+0.7
4,797,166	+				-0.5
4,797,166	+				+1.1
4,797,166	+				+0.7
4,797,166	+				-0.5
4,797,166	+				-0.3
4,797,166	+				-0.3
4,797,166	+				+0.1
4,797,166	+				-0.9
4,797,166	+				-0.8
4,797,166	+				+0.7
4,797,166	+				-2.2
4,797,166	+				+0.1
4,797,167	-				-0.6
4,797,167	-				-0.2
4,797,167	-				+0.2
4,797,167	-				-0.1
4,797,167	-				+0.4
4,797,167	-				-0.0
4,797,167	-				-0.1
4,797,167	-				-1.1
4,797,170	+				-0.2
4,797,170	+				-1.1
4,797,170	+				+0.3
4,797,170	+				-0.7
4,797,170	+				+1.6
4,797,170	+				-0.2
4,797,170	+				-1.8
4,797,171	-				-0.6
4,797,171	-				+0.4
4,797,171	-				-0.4
4,797,171	-				-0.2
4,797,171	-				-1.2
4,797,171	-				+0.5
4,797,171	-				-1.6
4,797,171	-				+0.0
4,797,171	-				-0.7
4,797,195	-				-0.2
4,797,347	+		DZA65_RS22180	0.26	+1.8
4,797,347	+		DZA65_RS22180	0.26	-0.5
4,797,347	+				+0.8
4,797,347	+		DZA65_RS22180	0.26	-0.0
4,797,390	-		DZA65_RS22180	0.30	-1.4
4,797,390	-		DZA65_RS22180	0.30	-1.5
4,797,390	-		DZA65_RS22180	0.30	-1.3
4,797,390	-		DZA65_RS22180	0.30	-0.2
4,797,390	-		DZA65_RS22180	0.30	+0.4
4,797,443	+		DZA65_RS22180	0.36	-0.2
4,797,443	+		DZA65_RS22180	0.36	+0.5
4,797,443	+		DZA65_RS22180	0.36	-0.8
4,797,444	-		DZA65_RS22180	0.36	-0.7
4,797,444	-		DZA65_RS22180	0.36	-0.9
4,797,444	-		DZA65_RS22180	0.36	-0.6
4,797,444	-		DZA65_RS22180	0.36	-0.9
4,797,444	-		DZA65_RS22180	0.36	+0.5
4,797,483	-		DZA65_RS22180	0.40	-0.6
4,797,502	+		DZA65_RS22180	0.42	-1.6
4,797,502	+		DZA65_RS22180	0.42	+0.4
4,797,503	-		DZA65_RS22180	0.42	-1.6
4,797,503	-		DZA65_RS22180	0.42	-0.8
4,797,503	-		DZA65_RS22180	0.42	-1.7
4,797,503	-		DZA65_RS22180	0.42	-0.4
4,797,512	+		DZA65_RS22180	0.43	-0.3
4,797,533	+		DZA65_RS22180	0.45	-0.0
4,797,533	+		DZA65_RS22180	0.45	-1.5
4,797,534	-		DZA65_RS22180	0.46	-0.4
4,797,550	+		DZA65_RS22180	0.47	-0.4
4,797,551	-		DZA65_RS22180	0.47	-1.5
4,797,551	-		DZA65_RS22180	0.47	+0.5
4,797,551	-		DZA65_RS22180	0.47	-0.9
4,797,620	+		DZA65_RS22180	0.55	-1.2
4,797,620	+		DZA65_RS22180	0.55	+1.3
4,797,621	-		DZA65_RS22180	0.55	-0.9
4,797,621	-		DZA65_RS22180	0.55	-0.8
4,797,621	-		DZA65_RS22180	0.55	-0.1
4,797,783	+		DZA65_RS22180	0.72	+1.1
4,797,783	+		DZA65_RS22180	0.72	-1.1
4,797,807	+		DZA65_RS22180	0.75	+0.3
4,797,807	+		DZA65_RS22180	0.75	-1.1
4,797,807	+				+0.4
4,797,807	+		DZA65_RS22180	0.75	+0.8
4,797,807	+		DZA65_RS22180	0.75	+0.4
4,797,807	+		DZA65_RS22180	0.75	+0.4
4,797,807	+		DZA65_RS22180	0.75	-0.4
4,797,808	-		DZA65_RS22180	0.75	-1.0
4,797,808	-		DZA65_RS22180	0.75	-1.8
4,797,808	-		DZA65_RS22180	0.75	-0.3
4,797,808	-		DZA65_RS22180	0.75	-1.1
4,797,834	+		DZA65_RS22180	0.77	-0.8
4,797,835	-		DZA65_RS22180	0.77	-0.3
4,797,835	-		DZA65_RS22180	0.77	-0.7
4,797,931	+		DZA65_RS22180	0.88	-2.4
4,797,931	+		DZA65_RS22180	0.88	-0.4
4,797,931	+		DZA65_RS22180	0.88	-1.6
4,797,931	+		DZA65_RS22180	0.88	-0.0
4,797,931	+		DZA65_RS22180	0.88	-0.5
4,797,932	-		DZA65_RS22180	0.88	-0.2
4,797,932	-		DZA65_RS22180	0.88	-1.3
4,797,932	-		DZA65_RS22180	0.88	-0.2
4,797,932	-		DZA65_RS22180	0.88	-0.1
4,797,932	-		DZA65_RS22180	0.88	+0.4
4,797,952	-				-2.2
4,797,972	-				+0.1
4,797,997	+				+1.2
4,798,000	+				-0.1
4,798,000	+				-0.0
4,798,000	+				+0.6
4,798,000	+				-0.9
4,798,000	+				+0.8
4,798,000	+				+0.8
4,798,001	-				+1.0
4,798,001	-				-0.0
4,798,001	-				-0.2
4,798,001	-				+0.2
4,798,001	-				-0.1
4,798,001	-				+0.1
4,798,039	+				-1.6
4,798,039	+				-0.1
4,798,040	-				+0.8
4,798,042	+				-1.1
4,798,042	+				-1.4
4,798,042	+				+0.3
4,798,042	+				-0.4
4,798,042	+				-0.5
4,798,042	+				-0.6
4,798,042	+				+0.7
4,798,042	+				+0.4
4,798,043	-				+1.4
4,798,043	-				-0.5
4,798,043	-				+0.9
4,798,043	-				-0.7
4,798,043	-				-0.9
4,798,043	-				-1.8
4,798,043	-				-1.3
4,798,046	+				-0.9
4,798,046	+				-0.5
4,798,047	-				+1.4
4,798,047	-				+0.4
4,798,066	+				+0.5
4,798,066	+				+0.3
4,798,066	+				-1.6
4,798,066	+				-0.4
4,798,066	+				-0.6
4,798,066	+				-2.2
4,798,066	+				+0.4
4,798,067	-				+0.6
4,798,067	-				+0.6
4,798,067	-				-0.2
4,798,070	+				-0.7
4,798,070	+				-0.5
4,798,070	+				+0.2
4,798,070	+				-0.4
4,798,070	+				-0.3
4,798,070	+				+0.4
4,798,070	+				+0.6
4,798,070	+				-0.2
4,798,070	+				+1.8
4,798,070	+				-1.4
4,798,070	+				-0.6
4,798,071	-				-0.4
4,798,071	-				-0.9
4,798,071	-				+0.5
4,798,071	-				+0.2
4,798,071	-				+0.3
4,798,071	-				-0.5
4,798,071	-				+1.0
4,798,071	-				+0.0
4,798,071	-				-0.7
4,798,071	-				-1.6
4,798,071	-				-0.6
4,798,071	-				-0.4
4,798,071	-				+0.7
4,798,071	-				+1.9
4,798,071	-				+0.7
4,798,081	+				-0.5
4,798,081	+				-0.6
4,798,081	+				-0.7
4,798,081	+				-0.0
4,798,081	+				+1.6
4,798,081	+				-0.2
4,798,081	+				+0.0
4,798,081	+				-0.9
4,798,082	-				-2.1
4,798,082	-				+0.2
4,798,082	-				+0.2
4,798,082	-				-0.0
4,798,082	-				+1.1
4,798,082	-				-0.5
4,798,082	-				-0.4
4,798,082	-				+0.4
4,798,098	+				-1.3
4,798,098	+				+0.3
4,798,098	+				+1.7
4,798,099	-				+1.9
4,798,099	-				+0.2
4,798,100	+				-0.9
4,798,101	-				-0.3
4,798,101	-				+0.3
4,798,133	+				-0.2
4,798,134	-				+0.3
4,798,142	+				+1.4
4,798,142	+		DZA65_RS22185	0.10	-2.1
4,798,142	+		DZA65_RS22185	0.10	+0.9
4,798,142	+		DZA65_RS22185	0.10	-0.9
4,798,142	+		DZA65_RS22185	0.10	+0.9
4,798,142	+		DZA65_RS22185	0.10	+0.7
4,798,142	+		DZA65_RS22185	0.10	-0.3
4,798,143	-		DZA65_RS22185	0.11	-0.0
4,798,143	-		DZA65_RS22185	0.11	-0.2
4,798,143	-		DZA65_RS22185	0.11	+0.6
4,798,143	-		DZA65_RS22185	0.11	+1.2
4,798,143	-		DZA65_RS22185	0.11	+3.2
4,798,212	+		DZA65_RS22185	0.26	-2.4
4,798,212	+		DZA65_RS22185	0.26	-0.9
4,798,212	+		DZA65_RS22185	0.26	-2.5
4,798,212	+		DZA65_RS22185	0.26	-0.8
4,798,213	-		DZA65_RS22185	0.26	-1.3
4,798,213	-		DZA65_RS22185	0.26	+0.3
4,798,213	-		DZA65_RS22185	0.26	+0.5
4,798,218	+		DZA65_RS22185	0.28	+0.5
4,798,218	+		DZA65_RS22185	0.28	-0.7
4,798,218	+		DZA65_RS22185	0.28	-0.6
4,798,218	+		DZA65_RS22185	0.28	+0.4
4,798,218	+		DZA65_RS22185	0.28	-0.6
4,798,218	+		DZA65_RS22185	0.28	+1.4
4,798,219	-		DZA65_RS22185	0.28	+0.3
4,798,219	-		DZA65_RS22185	0.28	-0.6
4,798,219	-		DZA65_RS22185	0.28	+2.7
4,798,219	-		DZA65_RS22185	0.28	+0.7
4,798,297	+		DZA65_RS22185	0.46	-0.0
4,798,297	+		DZA65_RS22185	0.46	+1.0
4,798,297	+		DZA65_RS22185	0.46	-0.9
4,798,297	+		DZA65_RS22185	0.46	+0.6
4,798,298	-		DZA65_RS22185	0.46	-0.2
4,798,298	-		DZA65_RS22185	0.46	+0.7
4,798,298	-		DZA65_RS22185	0.46	+0.4
4,798,436	+		DZA65_RS22185	0.77	+0.7
4,798,437	-		DZA65_RS22185	0.78	+1.2
4,798,437	-		DZA65_RS22185	0.78	+0.8
4,798,437	-		DZA65_RS22185	0.78	+0.6
4,798,437	-		DZA65_RS22185	0.78	+0.0
4,798,523	+				+0.9
4,798,523	+				-1.3
4,798,523	+				-0.1
4,798,524	-				+0.8
4,798,534	+				-0.7
4,798,535	-				-2.1
4,798,543	+				-1.6
4,798,543	+				-0.8
4,798,543	+				+0.3
4,798,544	-				+1.7
4,798,544	-				-0.2
4,798,544	-				+0.0
4,798,556	+				-0.2
4,798,556	+				-1.0
4,798,557	-				+0.8
4,798,557	-				-0.5
4,798,626	+		DZA65_RS22190	0.14	-0.2
4,798,626	+		DZA65_RS22190	0.14	+0.1
4,798,626	+		DZA65_RS22190	0.14	-0.3
4,798,626	+		DZA65_RS22190	0.14	+1.0
4,798,626	+		DZA65_RS22190	0.14	-0.3
4,798,626	+		DZA65_RS22190	0.14	+1.4
4,798,627	-		DZA65_RS22190	0.14	+2.2
4,798,627	-		DZA65_RS22190	0.14	-0.5
4,798,627	-		DZA65_RS22190	0.14	+0.2
4,798,627	-		DZA65_RS22190	0.14	-0.4
4,798,627	-		DZA65_RS22190	0.14	-1.2
4,798,627	-		DZA65_RS22190	0.14	-0.2
4,798,627	-		DZA65_RS22190	0.14	+1.1
4,798,627	-		DZA65_RS22190	0.14	+1.1
4,798,655	+		DZA65_RS22190	0.18	+0.1
4,798,655	+		DZA65_RS22190	0.18	+1.0
4,798,759	+		DZA65_RS22190	0.35	-0.6
4,798,759	+		DZA65_RS22190	0.35	+0.6
4,798,760	-		DZA65_RS22190	0.36	+0.6
4,798,792	+		DZA65_RS22190	0.41	-0.2
4,798,829	+		DZA65_RS22190	0.47	+0.5
4,798,829	+		DZA65_RS22190	0.47	-0.2
4,798,830	-		DZA65_RS22190	0.47	+1.1
4,798,839	+		DZA65_RS22190	0.49	-0.7
4,798,839	+		DZA65_RS22190	0.49	+0.1
4,798,839	+		DZA65_RS22190	0.49	-0.2
4,798,839	+		DZA65_RS22190	0.49	-0.3
4,798,839	+		DZA65_RS22190	0.49	+0.1
4,798,840	-		DZA65_RS22190	0.49	+1.2
4,798,840	-		DZA65_RS22190	0.49	+0.0
4,798,840	-		DZA65_RS22190	0.49	+0.5
4,798,840	-		DZA65_RS22190	0.49	-1.2
4,798,840	-		DZA65_RS22190	0.49	+1.0
4,798,840	-		DZA65_RS22190	0.49	+0.0
4,798,840	-		DZA65_RS22190	0.49	+0.8
4,798,840	-		DZA65_RS22190	0.49	-0.9
4,798,842	+		DZA65_RS22190	0.49	-1.1
4,798,843	-		DZA65_RS22190	0.49	+0.6
4,798,843	-		DZA65_RS22190	0.49	-0.1
4,798,899	+		DZA65_RS22190	0.58	-2.3
4,798,899	+		DZA65_RS22190	0.58	+0.2
4,798,900	-		DZA65_RS22190	0.58	-0.0
4,798,900	-		DZA65_RS22190	0.58	+0.3
4,799,129	+				+0.2
4,799,130	-				+1.6
4,799,133	+				-2.5
4,799,133	+				+0.2
4,799,144	+				+1.4
4,799,144	+				-0.2
4,799,145	-				-0.6
4,799,146	+				+1.8
4,799,146	+				+0.2
4,799,146	+				+1.0
4,799,146	+				-0.7
4,799,146	+				-0.8
4,799,147	-				-0.2
4,799,147	-				-1.3
4,799,147	-				+1.0
4,799,147	-				+1.0
4,799,147	-				+0.3
4,799,147	-				+0.6
4,799,147	-				+0.8
4,799,147	-				+0.0
4,799,147	-				-0.8
4,799,189	-				+0.3
4,799,189	-				-0.7
4,799,221	-				+0.4
4,799,232	+				+0.6
4,799,232	+				+0.6
4,799,232	+				+0.2
4,799,232	+				-0.5
4,799,232	+				-0.6
4,799,233	-				+0.2
4,799,233	-				-0.3
4,799,233	-				-0.0
4,799,235	+				-2.1
4,799,235	+				+0.8
4,799,235	+				-0.0
4,799,235	+				-0.9
4,799,236	-				+0.6
4,799,236	-				-0.8
4,799,236	-				+0.7
4,799,236	-				+0.7
4,799,236	-				-1.2
4,799,293	+				-0.2
4,799,338	+				-0.2
4,799,343	+				+0.1
4,799,344	-				-0.1
4,799,357	+				-0.5
4,799,378	-				-2.1
4,799,378	-				-0.3
4,799,378	-				-0.1
4,799,460	+				-0.8