Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20930

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,522,457	+		DZA65_RS20925	0.56	-1.0
4,522,458	-		DZA65_RS20925	0.56	+0.5
4,522,481	+		DZA65_RS20925	0.57	-2.0
4,522,481	+		DZA65_RS20925	0.57	+0.1
4,522,482	-		DZA65_RS20925	0.57	-0.1
4,522,482	-		DZA65_RS20925	0.57	-0.4
4,522,484	+		DZA65_RS20925	0.57	-2.1
4,522,484	+		DZA65_RS20925	0.57	-0.7
4,522,484	+		DZA65_RS20925	0.57	-0.5
4,522,485	-		DZA65_RS20925	0.57	-0.4
4,522,485	-		DZA65_RS20925	0.57	+2.2
4,522,677	+		DZA65_RS20925	0.67	-0.7
4,522,677	+		DZA65_RS20925	0.67	-2.1
4,522,678	-		DZA65_RS20925	0.67	+0.3
4,522,679	+				+2.1
4,522,679	+		DZA65_RS20925	0.67	-2.3
4,522,680	-		DZA65_RS20925	0.67	+0.5
4,522,688	+		DZA65_RS20925	0.67	-1.2
4,522,688	+		DZA65_RS20925	0.67	+0.3
4,522,689	-		DZA65_RS20925	0.67	-0.3
4,522,711	+		DZA65_RS20925	0.68	-0.8
4,522,711	+		DZA65_RS20925	0.68	-1.5
4,522,711	+		DZA65_RS20925	0.68	-0.5
4,522,711	+		DZA65_RS20925	0.68	+0.5
4,522,711	+		DZA65_RS20925	0.68	-0.9
4,522,712	-		DZA65_RS20925	0.68	-0.4
4,522,712	-		DZA65_RS20925	0.68	-1.3
4,522,712	-		DZA65_RS20925	0.68	-1.0
4,522,781	+		DZA65_RS20925	0.72	-0.1
4,522,781	+		DZA65_RS20925	0.72	-1.7
4,522,782	-		DZA65_RS20925	0.72	-0.8
4,522,782	-		DZA65_RS20925	0.72	-0.6
4,522,782	-		DZA65_RS20925	0.72	-1.0
4,522,814	+		DZA65_RS20925	0.74	-0.4
4,522,814	+				+1.0
4,522,814	+		DZA65_RS20925	0.74	-1.9
4,522,814	+		DZA65_RS20925	0.74	-0.4
4,522,815	-		DZA65_RS20925	0.74	+0.1
4,522,880	+		DZA65_RS20925	0.77	-1.3
4,522,880	+		DZA65_RS20925	0.77	-0.5
4,522,880	+		DZA65_RS20925	0.77	-0.5
4,522,881	-		DZA65_RS20925	0.77	-0.1
4,522,934	+		DZA65_RS20925	0.80	-0.8
4,522,934	+		DZA65_RS20925	0.80	-0.1
4,522,935	-		DZA65_RS20925	0.80	+0.7
4,522,935	-		DZA65_RS20925	0.80	-0.2
4,522,935	-		DZA65_RS20925	0.80	+0.8
4,522,966	+		DZA65_RS20925	0.81	-0.6
4,522,966	+		DZA65_RS20925	0.81	+0.5
4,522,967	-		DZA65_RS20925	0.81	+0.2
4,522,967	-		DZA65_RS20925	0.81	-0.7
4,522,967	-		DZA65_RS20925	0.81	-0.9
4,523,073	+		DZA65_RS20925	0.87	-2.5
4,523,073	+		DZA65_RS20925	0.87	-1.8
4,523,073	+		DZA65_RS20925	0.87	-1.4
4,523,073	+		DZA65_RS20925	0.87	+0.9
4,523,073	+		DZA65_RS20925	0.87	-0.7
4,523,074	-		DZA65_RS20925	0.87	-1.5
4,523,132	+		DZA65_RS20925	0.90	-0.5
4,523,175	+				+0.0
4,523,175	+				-2.1
4,523,176	-				-2.4
4,523,230	-				-1.7
4,523,356	+				-0.1
4,523,356	+				+0.2
4,523,356	+				+1.3
4,523,357	-				-0.3
4,523,357	-				-1.5
4,523,357	-				-1.8
4,523,357	-				-2.3
4,523,357	-				-1.3
4,523,357	-				-1.3
4,523,428	+				+0.3
4,523,428	+				-0.5
4,523,428	+				-0.5
4,523,428	+				+0.3
4,523,428	+				-1.5
4,523,428	+				-1.6
4,523,429	-				-2.5
4,523,429	-				-0.5
4,523,429	-				+0.7
4,523,429	-				-0.8
4,523,429	-				-1.6
4,523,429	-				-0.3
4,523,429	-				-0.3
4,523,429	-				-2.4
4,523,429	-				-2.4
4,523,429	-				-0.3
4,523,442	-				-0.3
4,523,464	+				-0.8
4,523,481	-				-1.5
4,523,550	-				+1.1
4,523,561	+		DZA65_RS20930	0.10	-1.0
4,523,562	-		DZA65_RS20930	0.10	-0.8
4,523,562	-		DZA65_RS20930	0.10	-1.8
4,523,562	-		DZA65_RS20930	0.10	+0.3
4,523,659	+		DZA65_RS20930	0.15	-1.7
4,523,659	+		DZA65_RS20930	0.15	-0.6
4,523,671	+		DZA65_RS20930	0.15	-0.7
4,523,671	+		DZA65_RS20930	0.15	-2.1
4,523,672	-		DZA65_RS20930	0.15	-2.1
4,523,672	-		DZA65_RS20930	0.15	-0.6
4,523,672	-		DZA65_RS20930	0.15	-2.4
4,523,724	+		DZA65_RS20930	0.18	-1.0
4,523,843	-		DZA65_RS20930	0.23	-1.3
4,523,861	-		DZA65_RS20930	0.24	-0.1
4,523,863	+		DZA65_RS20930	0.24	-0.9
4,523,863	+		DZA65_RS20930	0.24	+0.3
4,523,863	+		DZA65_RS20930	0.24	+0.9
4,523,863	+		DZA65_RS20930	0.24	-1.3
4,523,863	+		DZA65_RS20930	0.24	+0.0
4,523,863	+		DZA65_RS20930	0.24	-1.3
4,523,864	-				+0.9
4,523,864	-		DZA65_RS20930	0.24	-1.4
4,523,864	-		DZA65_RS20930	0.24	-1.8
4,523,864	-		DZA65_RS20930	0.24	-1.4
4,523,864	-		DZA65_RS20930	0.24	-1.5
4,523,864	-		DZA65_RS20930	0.24	-1.4
4,523,864	-		DZA65_RS20930	0.24	-1.8
4,523,909	+		DZA65_RS20930	0.26	+0.8
4,523,909	+		DZA65_RS20930	0.26	+0.9
4,523,910	-		DZA65_RS20930	0.26	-1.0
4,523,910	-		DZA65_RS20930	0.26	-1.0
4,523,910	-		DZA65_RS20930	0.26	-0.5
4,523,910	-		DZA65_RS20930	0.26	-1.5
4,523,977	+				+1.3
4,523,977	+		DZA65_RS20930	0.29	-0.3
4,523,977	+		DZA65_RS20930	0.29	-0.6
4,523,977	+		DZA65_RS20930	0.29	-1.1
4,523,978	-		DZA65_RS20930	0.29	-0.5
4,523,978	-		DZA65_RS20930	0.29	-0.7
4,523,978	-		DZA65_RS20930	0.29	-1.1
4,523,983	+		DZA65_RS20930	0.30	-0.4
4,523,983	+		DZA65_RS20930	0.30	-2.4
4,523,983	+		DZA65_RS20930	0.30	-1.4
4,523,983	+		DZA65_RS20930	0.30	-0.8
4,523,983	+		DZA65_RS20930	0.30	+0.2
4,523,983	+		DZA65_RS20930	0.30	-0.6
4,523,983	+		DZA65_RS20930	0.30	-1.3
4,523,984	-		DZA65_RS20930	0.30	-2.8
4,523,984	-		DZA65_RS20930	0.30	-0.8
4,523,984	-		DZA65_RS20930	0.30	-2.0
4,523,984	-		DZA65_RS20930	0.30	-0.5
4,523,984	-		DZA65_RS20930	0.30	+0.1
4,523,984	-		DZA65_RS20930	0.30	-0.4
4,523,984	-		DZA65_RS20930	0.30	-1.3
4,523,984	-		DZA65_RS20930	0.30	-2.8
4,523,984	-		DZA65_RS20930	0.30	-0.3
4,523,984	-		DZA65_RS20930	0.30	-0.1
4,523,984	-		DZA65_RS20930	0.30	-2.0
4,523,984	-		DZA65_RS20930	0.30	-1.7
4,523,984	-		DZA65_RS20930	0.30	-1.3
4,523,984	-		DZA65_RS20930	0.30	+0.7
4,523,984	-		DZA65_RS20930	0.30	+0.3
4,523,984	-		DZA65_RS20930	0.30	-0.4
4,524,016	+		DZA65_RS20930	0.31	+0.2
4,524,017	-		DZA65_RS20930	0.31	-0.3
4,524,020	+		DZA65_RS20930	0.31	+1.0
4,524,020	+		DZA65_RS20930	0.31	-0.9
4,524,020	+		DZA65_RS20930	0.31	-0.1
4,524,020	+		DZA65_RS20930	0.31	+1.3
4,524,020	+		DZA65_RS20930	0.31	-0.2
4,524,020	+		DZA65_RS20930	0.31	-1.1
4,524,020	+		DZA65_RS20930	0.31	+1.3
4,524,020	+		DZA65_RS20930	0.31	-0.3
4,524,020	+		DZA65_RS20930	0.31	+0.5
4,524,020	+		DZA65_RS20930	0.31	-0.3
4,524,021	-		DZA65_RS20930	0.31	-0.7
4,524,021	-		DZA65_RS20930	0.31	-1.4
4,524,021	-		DZA65_RS20930	0.31	+1.1
4,524,021	-		DZA65_RS20930	0.31	-1.0
4,524,021	-		DZA65_RS20930	0.31	+0.3
4,524,021	-		DZA65_RS20930	0.31	-2.6
4,524,021	-		DZA65_RS20930	0.31	-1.3
4,524,044	+		DZA65_RS20930	0.32	-0.9
4,524,044	+		DZA65_RS20930	0.32	-0.3
4,524,045	-		DZA65_RS20930	0.32	-3.4
4,524,045	-		DZA65_RS20930	0.32	-1.3
4,524,045	-		DZA65_RS20930	0.32	-0.8
4,524,045	-		DZA65_RS20930	0.32	-0.6
4,524,046	+		DZA65_RS20930	0.32	+0.6
4,524,046	+		DZA65_RS20930	0.32	+0.2
4,524,046	+		DZA65_RS20930	0.32	-2.4
4,524,046	+		DZA65_RS20930	0.32	-0.6
4,524,046	+		DZA65_RS20930	0.32	+0.7
4,524,046	+		DZA65_RS20930	0.32	+0.2
4,524,046	+		DZA65_RS20930	0.32	+0.1
4,524,046	+		DZA65_RS20930	0.32	-0.4
4,524,046	+		DZA65_RS20930	0.32	+0.5
4,524,046	+		DZA65_RS20930	0.32	-1.0
4,524,046	+		DZA65_RS20930	0.32	-0.1
4,524,046	+		DZA65_RS20930	0.32	-0.3
4,524,047	-		DZA65_RS20930	0.33	-1.8
4,524,047	-		DZA65_RS20930	0.33	-0.8
4,524,047	-		DZA65_RS20930	0.33	-0.7
4,524,047	-		DZA65_RS20930	0.33	-0.8
4,524,047	-		DZA65_RS20930	0.33	+1.1
4,524,047	-		DZA65_RS20930	0.33	-0.1
4,524,047	-		DZA65_RS20930	0.33	+0.2
4,524,047	-		DZA65_RS20930	0.33	-0.8
4,524,047	-		DZA65_RS20930	0.33	-0.9
4,524,047	-		DZA65_RS20930	0.33	-1.6
4,524,047	-		DZA65_RS20930	0.33	-0.7
4,524,047	-		DZA65_RS20930	0.33	-1.7
4,524,047	-		DZA65_RS20930	0.33	-1.7
4,524,074	+		DZA65_RS20930	0.34	-0.6
4,524,085	+		DZA65_RS20930	0.34	-1.0
4,524,085	+		DZA65_RS20930	0.34	+0.8
4,524,085	+		DZA65_RS20930	0.34	+0.2
4,524,085	+		DZA65_RS20930	0.34	-0.7
4,524,086	-				-0.1
4,524,086	-		DZA65_RS20930	0.34	-0.8
4,524,086	-		DZA65_RS20930	0.34	-1.0
4,524,086	-		DZA65_RS20930	0.34	-2.5
4,524,086	-		DZA65_RS20930	0.34	-1.0
4,524,086	-		DZA65_RS20930	0.34	-1.2
4,524,086	-		DZA65_RS20930	0.34	-0.8
4,524,199	+		DZA65_RS20930	0.39	-0.3
4,524,200	-		DZA65_RS20930	0.40	+0.5
4,524,241	+		DZA65_RS20930	0.41	-1.1
4,524,241	+		DZA65_RS20930	0.41	+0.0
4,524,242	-		DZA65_RS20930	0.41	-3.0
4,524,242	-		DZA65_RS20930	0.41	-1.6
4,524,242	-		DZA65_RS20930	0.41	-0.7
4,524,242	-		DZA65_RS20930	0.41	-0.3
4,524,244	+		DZA65_RS20930	0.42	+0.6
4,524,244	+		DZA65_RS20930	0.42	+0.5
4,524,244	+		DZA65_RS20930	0.42	-0.3
4,524,244	+		DZA65_RS20930	0.42	-0.8
4,524,244	+		DZA65_RS20930	0.42	-1.3
4,524,245	-		DZA65_RS20930	0.42	+0.5
4,524,245	-		DZA65_RS20930	0.42	-0.4
4,524,245	-		DZA65_RS20930	0.42	-2.3
4,524,245	-		DZA65_RS20930	0.42	-1.7
4,524,245	-		DZA65_RS20930	0.42	-1.6
4,524,245	-		DZA65_RS20930	0.42	-0.6
4,524,245	-		DZA65_RS20930	0.42	-0.5
4,524,278	-		DZA65_RS20930	0.43	-0.5
4,524,286	+		DZA65_RS20930	0.43	-2.0
4,524,346	+		DZA65_RS20930	0.46	+0.5
4,524,346	+		DZA65_RS20930	0.46	+0.6
4,524,347	-		DZA65_RS20930	0.46	+0.6
4,524,347	-		DZA65_RS20930	0.46	+0.8
4,524,367	+		DZA65_RS20930	0.47	-0.5
4,524,367	+		DZA65_RS20930	0.47	-0.1
4,524,367	+		DZA65_RS20930	0.47	-0.1
4,524,367	+		DZA65_RS20930	0.47	+0.0
4,524,367	+		DZA65_RS20930	0.47	-1.6
4,524,367	+		DZA65_RS20930	0.47	-1.1
4,524,367	+		DZA65_RS20930	0.47	-1.9
4,524,368	-		DZA65_RS20930	0.47	-1.4
4,524,368	-		DZA65_RS20930	0.47	-1.0
4,524,368	-		DZA65_RS20930	0.47	-1.3
4,524,368	-		DZA65_RS20930	0.47	-0.8
4,524,368	-		DZA65_RS20930	0.47	-0.8
4,524,368	-		DZA65_RS20930	0.47	-2.7
4,524,368	-		DZA65_RS20930	0.47	+1.3
4,524,397	+		DZA65_RS20930	0.49	-0.7
4,524,398	-		DZA65_RS20930	0.49	+0.9
4,524,452	-		DZA65_RS20930	0.51	-1.6
4,524,563	-		DZA65_RS20930	0.56	-1.8
4,524,604	+		DZA65_RS20930	0.58	-1.8
4,524,605	-		DZA65_RS20930	0.58	-1.0
4,524,605	-		DZA65_RS20930	0.58	-0.7
4,524,605	-		DZA65_RS20930	0.58	-1.5
4,524,606	+		DZA65_RS20930	0.58	+0.3
4,524,606	+		DZA65_RS20930	0.58	-0.5
4,524,607	-		DZA65_RS20930	0.58	+0.2
4,524,607	-				+0.5
4,524,622	+		DZA65_RS20930	0.59	-0.5
4,524,678	-		DZA65_RS20930	0.61	-0.9
4,524,697	+		DZA65_RS20930	0.62	+0.2
4,524,698	-		DZA65_RS20930	0.62	-0.8
4,524,698	-		DZA65_RS20930	0.62	-1.4
4,524,777	+		DZA65_RS20930	0.66	-0.5
4,524,777	+		DZA65_RS20930	0.66	-0.3
4,524,777	+		DZA65_RS20930	0.66	+0.1
4,524,777	+		DZA65_RS20930	0.66	-0.8
4,524,777	+		DZA65_RS20930	0.66	-0.9
4,524,777	+		DZA65_RS20930	0.66	+0.3
4,524,778	-		DZA65_RS20930	0.66	-0.7
4,524,778	-				+2.1
4,524,778	-		DZA65_RS20930	0.66	-0.5
4,524,778	-		DZA65_RS20930	0.66	+0.0
4,524,778	-		DZA65_RS20930	0.66	-1.1
4,524,778	-		DZA65_RS20930	0.66	+0.3
4,524,778	-		DZA65_RS20930	0.66	-1.5
4,524,778	-		DZA65_RS20930	0.66	-1.6
4,524,784	+		DZA65_RS20930	0.66	-0.7
4,524,784	+		DZA65_RS20930	0.66	-1.3
4,524,784	+		DZA65_RS20930	0.66	-1.5
4,524,785	-		DZA65_RS20930	0.66	-1.3
4,524,785	-		DZA65_RS20930	0.66	-1.5
4,524,785	-		DZA65_RS20930	0.66	-1.1
4,524,785	-		DZA65_RS20930	0.66	-0.5
4,524,804	+		DZA65_RS20930	0.67	+0.4
4,524,804	+		DZA65_RS20930	0.67	+0.2
4,524,804	+		DZA65_RS20930	0.67	-0.9
4,524,804	+		DZA65_RS20930	0.67	-1.5
4,524,804	+		DZA65_RS20930	0.67	+0.6
4,524,805	-		DZA65_RS20930	0.67	+0.7
4,524,805	-		DZA65_RS20930	0.67	-1.1
4,524,904	+		DZA65_RS20930	0.72	+1.0
4,524,905	-		DZA65_RS20930	0.72	+0.3
4,524,905	-		DZA65_RS20930	0.72	-0.1
4,524,958	+		DZA65_RS20930	0.74	-0.7
4,524,958	+		DZA65_RS20930	0.74	-0.4
4,524,958	+		DZA65_RS20930	0.74	-1.8
4,524,958	+		DZA65_RS20930	0.74	-1.4
4,524,958	+		DZA65_RS20930	0.74	-1.3
4,524,958	+		DZA65_RS20930	0.74	-1.0
4,524,959	-		DZA65_RS20930	0.74	-1.6
4,524,959	-		DZA65_RS20930	0.74	-0.8
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