Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20920

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,519,156	+		DZA65_RS20915	0.40	-2.9
4,519,156	+		DZA65_RS20915	0.40	-0.7
4,519,157	-		DZA65_RS20915	0.40	-2.3
4,519,157	-		DZA65_RS20915	0.40	-1.0
4,519,221	+		DZA65_RS20915	0.45	-2.5
4,519,221	+		DZA65_RS20915	0.45	-2.0
4,519,221	+		DZA65_RS20915	0.45	-0.8
4,519,221	+		DZA65_RS20915	0.45	+0.5
4,519,221	+		DZA65_RS20915	0.45	+0.1
4,519,221	+		DZA65_RS20915	0.45	-0.4
4,519,222	-		DZA65_RS20915	0.45	-2.9
4,519,222	-		DZA65_RS20915	0.45	-0.7
4,519,222	-		DZA65_RS20915	0.45	-1.4
4,519,222	-		DZA65_RS20915	0.45	-1.7
4,519,222	-		DZA65_RS20915	0.45	-1.2
4,519,338	+		DZA65_RS20915	0.53	-1.3
4,519,344	+		DZA65_RS20915	0.53	-1.5
4,519,344	+		DZA65_RS20915	0.53	-0.8
4,519,345	-		DZA65_RS20915	0.53	-2.0
4,519,345	-		DZA65_RS20915	0.53	-1.8
4,519,358	+		DZA65_RS20915	0.54	-1.3
4,519,358	+		DZA65_RS20915	0.54	-2.3
4,519,371	+		DZA65_RS20915	0.55	-1.3
4,519,371	+		DZA65_RS20915	0.55	-1.6
4,519,371	+		DZA65_RS20915	0.55	-0.6
4,519,371	+		DZA65_RS20915	0.55	-1.6
4,519,371	+		DZA65_RS20915	0.55	-0.8
4,519,371	+		DZA65_RS20915	0.55	+0.1
4,519,371	+		DZA65_RS20915	0.55	-2.1
4,519,371	+				-0.3
4,519,371	+		DZA65_RS20915	0.55	-2.0
4,519,372	-		DZA65_RS20915	0.55	-1.0
4,519,372	-		DZA65_RS20915	0.55	-0.8
4,519,372	-		DZA65_RS20915	0.55	-2.7
4,519,372	-		DZA65_RS20915	0.55	-2.5
4,519,372	-		DZA65_RS20915	0.55	+1.1
4,519,393	+		DZA65_RS20915	0.57	-1.3
4,519,393	+		DZA65_RS20915	0.57	+0.6
4,519,393	+		DZA65_RS20915	0.57	-0.4
4,519,394	-		DZA65_RS20915	0.57	-3.1
4,519,394	-		DZA65_RS20915	0.57	-1.7
4,519,394	-		DZA65_RS20915	0.57	-1.1
4,519,394	-		DZA65_RS20915	0.57	+0.1
4,519,394	-		DZA65_RS20915	0.57	-1.1
4,519,394	-		DZA65_RS20915	0.57	-0.1
4,519,404	+		DZA65_RS20915	0.57	-1.5
4,519,404	+		DZA65_RS20915	0.57	-1.9
4,519,405	-		DZA65_RS20915	0.57	-1.8
4,519,405	-		DZA65_RS20915	0.57	-1.6
4,519,407	+		DZA65_RS20915	0.58	-1.5
4,519,408	-		DZA65_RS20915	0.58	-2.8
4,519,408	-		DZA65_RS20915	0.58	-1.3
4,519,408	-		DZA65_RS20915	0.58	-1.0
4,519,408	-		DZA65_RS20915	0.58	-0.5
4,519,440	+		DZA65_RS20915	0.60	-0.3
4,519,440	+		DZA65_RS20915	0.60	-1.6
4,519,441	-		DZA65_RS20915	0.60	-2.5
4,519,441	-		DZA65_RS20915	0.60	-2.4
4,519,441	-		DZA65_RS20915	0.60	-0.6
4,519,455	+		DZA65_RS20915	0.61	+0.3
4,519,455	+		DZA65_RS20915	0.61	+0.1
4,519,455	+		DZA65_RS20915	0.61	-2.4
4,519,455	+		DZA65_RS20915	0.61	-0.7
4,519,456	-		DZA65_RS20915	0.61	-1.6
4,519,456	-		DZA65_RS20915	0.61	-1.1
4,519,456	-		DZA65_RS20915	0.61	-1.5
4,519,456	-		DZA65_RS20915	0.61	-0.3
4,519,467	+		DZA65_RS20915	0.62	-2.0
4,519,511	+		DZA65_RS20915	0.65	-0.8
4,519,511	+		DZA65_RS20915	0.65	-1.8
4,519,511	+		DZA65_RS20915	0.65	-2.4
4,519,521	+		DZA65_RS20915	0.66	-2.5
4,519,522	-		DZA65_RS20915	0.66	-1.4
4,519,522	-		DZA65_RS20915	0.66	-2.4
4,519,531	+		DZA65_RS20915	0.66	-1.6
4,519,531	+		DZA65_RS20915	0.66	-0.9
4,519,531	+		DZA65_RS20915	0.66	-3.5
4,519,532	-		DZA65_RS20915	0.66	-2.7
4,519,532	-		DZA65_RS20915	0.66	-1.4
4,519,532	-		DZA65_RS20915	0.66	-2.5
4,519,540	+		DZA65_RS20915	0.67	-1.4
4,519,540	+		DZA65_RS20915	0.67	-1.9
4,519,540	+		DZA65_RS20915	0.67	-1.0
4,519,540	+		DZA65_RS20915	0.67	-0.1
4,519,541	-		DZA65_RS20915	0.67	-0.5
4,519,541	-		DZA65_RS20915	0.67	-0.7
4,519,541	-		DZA65_RS20915	0.67	-1.2
4,519,541	-		DZA65_RS20915	0.67	-0.7
4,519,541	-		DZA65_RS20915	0.67	-0.7
4,519,545	-		DZA65_RS20915	0.67	-2.1
4,519,579	-		DZA65_RS20915	0.70	+0.2
4,519,708	-		DZA65_RS20915	0.79	+0.7
4,519,708	-		DZA65_RS20915	0.79	+0.6
4,519,708	-		DZA65_RS20915	0.79	-0.7
4,519,708	-		DZA65_RS20915	0.79	-1.5
4,519,752	+		DZA65_RS20915	0.82	-1.2
4,519,752	+		DZA65_RS20915	0.82	-1.2
4,519,752	+		DZA65_RS20915	0.82	-1.0
4,519,752	+		DZA65_RS20915	0.82	-0.4
4,519,752	+		DZA65_RS20915	0.82	-1.7
4,519,752	+		DZA65_RS20915	0.82	-0.3
4,519,753	-		DZA65_RS20915	0.82	-1.7
4,519,753	-		DZA65_RS20915	0.82	+0.9
4,519,764	-		DZA65_RS20915	0.82	-1.6
4,519,772	-		DZA65_RS20915	0.83	-2.5
4,519,776	+		DZA65_RS20915	0.83	+0.7
4,519,776	+		DZA65_RS20915	0.83	-0.8
4,519,776	+		DZA65_RS20915	0.83	+0.2
4,519,776	+		DZA65_RS20915	0.83	-3.6
4,519,776	+		DZA65_RS20915	0.83	+0.0
4,519,776	+		DZA65_RS20915	0.83	-2.1
4,519,776	+		DZA65_RS20915	0.83	-1.5
4,519,776	+		DZA65_RS20915	0.83	+0.1
4,519,776	+		DZA65_RS20915	0.83	-0.3
4,519,776	+		DZA65_RS20915	0.83	-1.9
4,519,776	+		DZA65_RS20915	0.83	+0.1
4,519,777	-		DZA65_RS20915	0.83	-2.6
4,519,777	-		DZA65_RS20915	0.83	-1.1
4,519,777	-		DZA65_RS20915	0.83	-0.2
4,519,777	-		DZA65_RS20915	0.83	+0.3
4,519,777	-		DZA65_RS20915	0.83	-0.9
4,519,777	-		DZA65_RS20915	0.83	-1.2
4,519,777	-		DZA65_RS20915	0.83	+1.3
4,519,777	-		DZA65_RS20915	0.83	-0.5
4,519,777	-		DZA65_RS20915	0.83	-1.8
4,519,777	-		DZA65_RS20915	0.83	-2.8
4,519,777	-				+0.3
4,519,777	-		DZA65_RS20915	0.83	-1.0
4,519,777	-		DZA65_RS20915	0.83	-1.7
4,519,777	-		DZA65_RS20915	0.83	-0.1
4,519,777	-		DZA65_RS20915	0.83	-1.7
4,519,777	-		DZA65_RS20915	0.83	-0.3
4,519,777	-		DZA65_RS20915	0.83	+0.1
4,519,777	-		DZA65_RS20915	0.83	-0.5
4,519,794	+		DZA65_RS20915	0.85	-2.3
4,519,794	+		DZA65_RS20915	0.85	-0.7
4,519,794	+		DZA65_RS20915	0.85	-2.4
4,519,794	+		DZA65_RS20915	0.85	-2.5
4,519,794	+		DZA65_RS20915	0.85	-1.3
4,519,794	+		DZA65_RS20915	0.85	-0.0
4,519,794	+		DZA65_RS20915	0.85	-1.5
4,519,794	+		DZA65_RS20915	0.85	+0.7
4,519,795	-		DZA65_RS20915	0.85	-0.1
4,519,795	-		DZA65_RS20915	0.85	-1.5
4,519,795	-		DZA65_RS20915	0.85	-0.5
4,519,795	-		DZA65_RS20915	0.85	-1.1
4,519,795	-		DZA65_RS20915	0.85	-1.1
4,519,795	-		DZA65_RS20915	0.85	-3.1
4,519,795	-		DZA65_RS20915	0.85	-1.2
4,519,795	-		DZA65_RS20915	0.85	-0.9
4,519,795	-		DZA65_RS20915	0.85	-2.1
4,519,831	+		DZA65_RS20915	0.87	-1.5
4,519,831	+		DZA65_RS20915	0.87	-3.1
4,519,832	-		DZA65_RS20915	0.87	+0.3
4,519,832	-		DZA65_RS20915	0.87	-1.5
4,519,923	-				-1.8
4,519,949	+				-0.1
4,519,949	+				-1.7
4,519,949	+				+0.2
4,519,949	+				-0.9
4,519,949	+				-2.6
4,519,949	+				-2.6
4,519,949	+				-3.2
4,519,949	+				-0.4
4,519,949	+				+0.1
4,519,950	-				+0.3
4,519,950	-				-2.3
4,519,950	-				-0.7
4,519,950	-				-0.4
4,519,950	-				+0.3
4,519,950	-				-0.7
4,519,950	-				-0.5
4,520,003	+				-2.1
4,520,003	+				-1.3
4,520,003	+				+0.1
4,520,003	+				-2.7
4,520,003	+				-0.4
4,520,003	+				+1.9
4,520,003	+				-3.2
4,520,003	+				-1.8
4,520,003	+				-1.0
4,520,003	+				-1.5
4,520,003	+				-0.8
4,520,003	+				-1.0
4,520,003	+				+0.6
4,520,003	+				-0.7
4,520,004	-				-1.1
4,520,004	-				-1.7
4,520,004	-				-1.8
4,520,004	-				-0.3
4,520,004	-				-0.5
4,520,004	-				-2.5
4,520,004	-				+0.5
4,520,004	-				-1.3
4,520,004	-				-1.9
4,520,004	-				-1.3
4,520,004	-				-2.4
4,520,101	+				-0.9
4,520,205	+				-0.3
4,520,205	+		DZA65_RS20920	0.13	-2.2
4,520,206	-		DZA65_RS20920	0.13	+0.8
4,520,206	-		DZA65_RS20920	0.13	-1.5
4,520,243	+		DZA65_RS20920	0.16	-0.5
4,520,244	-		DZA65_RS20920	0.16	-0.1
4,520,244	-		DZA65_RS20920	0.16	-0.4
4,520,244	-		DZA65_RS20920	0.16	+0.6
4,520,244	-		DZA65_RS20920	0.16	+0.3
4,520,292	+		DZA65_RS20920	0.20	+0.0
4,520,417	+		DZA65_RS20920	0.29	-1.1
4,520,417	+		DZA65_RS20920	0.29	+0.0
4,520,418	-		DZA65_RS20920	0.29	-1.0
4,520,418	-		DZA65_RS20920	0.29	-1.0
4,520,418	-		DZA65_RS20920	0.29	-0.1
4,520,418	-		DZA65_RS20920	0.29	+0.1
4,520,418	-		DZA65_RS20920	0.29	-0.1
4,520,418	-		DZA65_RS20920	0.29	-0.8
4,520,418	-		DZA65_RS20920	0.29	-2.2
4,520,425	+		DZA65_RS20920	0.30	-0.5
4,520,425	+		DZA65_RS20920	0.30	+0.3
4,520,425	+		DZA65_RS20920	0.30	-0.3
4,520,425	+		DZA65_RS20920	0.30	-0.1
4,520,425	+		DZA65_RS20920	0.30	-0.5
4,520,425	+		DZA65_RS20920	0.30	-0.2
4,520,425	+		DZA65_RS20920	0.30	-0.9
4,520,425	+		DZA65_RS20920	0.30	-0.8
4,520,425	+		DZA65_RS20920	0.30	-0.1
4,520,425	+		DZA65_RS20920	0.30	-0.1
4,520,425	+		DZA65_RS20920	0.30	-1.7
4,520,425	+		DZA65_RS20920	0.30	-0.2
4,520,425	+		DZA65_RS20920	0.30	-1.1
4,520,425	+		DZA65_RS20920	0.30	+0.7
4,520,425	+		DZA65_RS20920	0.30	-1.4
4,520,425	+		DZA65_RS20920	0.30	-1.3
4,520,425	+		DZA65_RS20920	0.30	-0.0
4,520,425	+		DZA65_RS20920	0.30	-0.1
4,520,425	+		DZA65_RS20920	0.30	-1.4
4,520,426	-		DZA65_RS20920	0.30	-0.5
4,520,426	-		DZA65_RS20920	0.30	-0.5
4,520,426	-		DZA65_RS20920	0.30	-1.2
4,520,426	-		DZA65_RS20920	0.30	-0.7
4,520,426	-		DZA65_RS20920	0.30	-0.3
4,520,426	-		DZA65_RS20920	0.30	-0.3
4,520,426	-		DZA65_RS20920	0.30	+0.2
4,520,426	-		DZA65_RS20920	0.30	+0.1
4,520,426	-		DZA65_RS20920	0.30	+0.3
4,520,426	-		DZA65_RS20920	0.30	-0.3
4,520,426	-		DZA65_RS20920	0.30	-0.5
4,520,426	-		DZA65_RS20920	0.30	-1.3
4,520,426	-		DZA65_RS20920	0.30	-2.3
4,520,426	-		DZA65_RS20920	0.30	-0.9
4,520,426	-		DZA65_RS20920	0.30	+0.2
4,520,426	-		DZA65_RS20920	0.30	-0.7
4,520,426	-		DZA65_RS20920	0.30	+1.7
4,520,426	-		DZA65_RS20920	0.30	-1.0
4,520,477	-		DZA65_RS20920	0.34	+0.7
4,520,627	+		DZA65_RS20920	0.46	-0.1
4,520,627	+		DZA65_RS20920	0.46	-2.3
4,520,627	+		DZA65_RS20920	0.46	-1.8
4,520,627	+		DZA65_RS20920	0.46	-0.7
4,520,628	-		DZA65_RS20920	0.46	-1.7
4,520,628	-		DZA65_RS20920	0.46	+1.3
4,520,628	-		DZA65_RS20920	0.46	-0.9
4,520,628	-		DZA65_RS20920	0.46	+0.0
4,520,660	-		DZA65_RS20920	0.48	-0.8
4,520,660	-		DZA65_RS20920	0.48	-0.9
4,520,677	+		DZA65_RS20920	0.49	-1.0
4,520,677	+		DZA65_RS20920	0.49	-1.8
4,520,677	+		DZA65_RS20920	0.49	-1.1
4,520,677	+		DZA65_RS20920	0.49	-0.9
4,520,677	+		DZA65_RS20920	0.49	-1.7
4,520,677	+		DZA65_RS20920	0.49	-2.1
4,520,677	+		DZA65_RS20920	0.49	-0.7
4,520,677	+		DZA65_RS20920	0.49	-0.9
4,520,677	+		DZA65_RS20920	0.49	+0.1
4,520,677	+		DZA65_RS20920	0.49	-0.4
4,520,678	-		DZA65_RS20920	0.50	-0.9
4,520,678	-		DZA65_RS20920	0.50	-1.8
4,520,678	-		DZA65_RS20920	0.50	-0.3
4,520,678	-		DZA65_RS20920	0.50	+1.1
4,520,678	-		DZA65_RS20920	0.50	-0.5
4,520,756	+		DZA65_RS20920	0.56	-0.1
4,520,757	-		DZA65_RS20920	0.56	-3.3
4,520,878	+		DZA65_RS20920	0.65	-2.3
4,520,879	-		DZA65_RS20920	0.65	-1.0
4,520,879	-		DZA65_RS20920	0.65	+0.1
4,520,890	+		DZA65_RS20920	0.66	-1.7
4,520,890	+		DZA65_RS20920	0.66	-1.0
4,520,890	+		DZA65_RS20920	0.66	-1.7
4,520,890	+		DZA65_RS20920	0.66	-0.4
4,520,890	+		DZA65_RS20920	0.66	-0.7
4,520,890	+		DZA65_RS20920	0.66	-2.0
4,520,890	+		DZA65_RS20920	0.66	-0.7
4,520,890	+		DZA65_RS20920	0.66	-0.6
4,520,891	-		DZA65_RS20920	0.66	-2.1
4,520,891	-		DZA65_RS20920	0.66	-0.1
4,520,891	-		DZA65_RS20920	0.66	+0.5
4,520,891	-		DZA65_RS20920	0.66	-0.5
4,520,891	-		DZA65_RS20920	0.66	-1.9
4,520,891	-		DZA65_RS20920	0.66	-2.1
4,520,891	-		DZA65_RS20920	0.66	+0.5
4,520,891	-		DZA65_RS20920	0.66	-0.3
4,520,891	-		DZA65_RS20920	0.66	-1.5
4,520,891	-		DZA65_RS20920	0.66	+0.0
4,520,920	+		DZA65_RS20920	0.68	-0.6
4,520,920	+		DZA65_RS20920	0.68	-1.8
4,520,920	+		DZA65_RS20920	0.68	-2.0
4,520,920	+		DZA65_RS20920	0.68	+0.3
4,520,921	-		DZA65_RS20920	0.68	-0.0
4,520,921	-		DZA65_RS20920	0.68	-1.6
4,520,921	-		DZA65_RS20920	0.68	-1.6
4,520,943	-		DZA65_RS20920	0.70	-0.3
4,520,945	+		DZA65_RS20920	0.70	-0.9
4,520,946	-		DZA65_RS20920	0.70	-1.5
4,520,946	-		DZA65_RS20920	0.70	-0.5
4,520,946	-		DZA65_RS20920	0.70	+0.0
4,521,103	+		DZA65_RS20920	0.83	+0.8
4,521,175	+		DZA65_RS20920	0.88	-0.1
4,521,179	+		DZA65_RS20920	0.89	-0.7
4,521,180	-		DZA65_RS20920	0.89	+1.6
4,521,180	-		DZA65_RS20920	0.89	-1.0
4,521,192	+		DZA65_RS20920	0.90	-1.6
4,521,193	-		DZA65_RS20920	0.90	-0.7
4,521,338	+				-0.6
4,521,339	-				-0.3
4,521,342	-				-0.3
4,521,357	-				-0.2
4,521,377	-				-1.1
4,521,377	-				-2.8
4,521,520	+				+0.7
4,521,520	+				-0.2
4,521,520	+				-0.3
4,521,652	+		DZA65_RS20925	0.15	+0.8
4,521,653	-		DZA65_RS20925	0.15	-0.4
4,521,693	+		DZA65_RS20925	0.17	-1.4
4,521,693	+		DZA65_RS20925	0.17	-1.3
4,521,758	+		DZA65_RS20925	0.20	-0.4
4,521,759	-		DZA65_RS20925	0.20	-0.5
4,521,759	-		DZA65_RS20925	0.20	-0.3
4,522,008	+		DZA65_RS20925	0.33	-0.7
4,522,008	+		DZA65_RS20925	0.33	-0.5
4,522,009	-		DZA65_RS20925	0.33	+0.7
4,522,146	+		DZA65_RS20925	0.40	+0.1
4,522,146	+		DZA65_RS20925	0.40	-0.9
4,522,146	+		DZA65_RS20925	0.40	-0.9
4,522,146	+		DZA65_RS20925	0.40	-0.2
4,522,147	-		DZA65_RS20925	0.40	-0.3
4,522,147	-		DZA65_RS20925	0.40	+0.1
4,522,281	+		DZA65_RS20925	0.47	+0.1