Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18765

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,045,857	-		DZA65_RS18755	0.78	-1.2
4,046,002	-				-1.2
4,046,076	-				-0.3
4,046,175	-				+1.4
4,046,229	+				+0.3
4,046,230	-				+0.2
4,046,267	-				-0.3
4,046,291	-				+0.5
4,046,330	+		DZA65_RS18760	0.14	+0.3
4,046,331	-		DZA65_RS18760	0.15	+0.2
4,046,393	+		DZA65_RS18760	0.25	-0.1
4,046,406	+		DZA65_RS18760	0.27	-2.4
4,046,483	+		DZA65_RS18760	0.40	-0.9
4,046,485	+		DZA65_RS18760	0.41	-0.6
4,046,485	+		DZA65_RS18760	0.41	+0.0
4,046,486	-		DZA65_RS18760	0.41	+0.4
4,046,486	-		DZA65_RS18760	0.41	+0.5
4,046,486	-		DZA65_RS18760	0.41	-1.1
4,046,486	-		DZA65_RS18760	0.41	+0.4
4,046,486	-		DZA65_RS18760	0.41	+0.2
4,046,486	-		DZA65_RS18760	0.41	-0.7
4,046,499	+		DZA65_RS18760	0.43	+0.5
4,046,499	+		DZA65_RS18760	0.43	+1.5
4,046,500	-		DZA65_RS18760	0.43	+0.5
4,046,533	+		DZA65_RS18760	0.49	+0.5
4,046,534	-		DZA65_RS18760	0.49	+1.4
4,046,534	-		DZA65_RS18760	0.49	+1.2
4,046,547	-		DZA65_RS18760	0.51	-0.7
4,046,581	-		DZA65_RS18760	0.57	+0.5
4,046,604	+		DZA65_RS18760	0.61	-1.1
4,046,639	+		DZA65_RS18760	0.67	+0.3
4,046,639	+		DZA65_RS18760	0.67	+0.3
4,046,646	-		DZA65_RS18760	0.68	-0.1
4,046,683	-		DZA65_RS18760	0.74	+0.3
4,046,683	-		DZA65_RS18760	0.74	+1.5
4,046,707	+		DZA65_RS18760	0.79	+0.9
4,046,723	+		DZA65_RS18760	0.81	-0.5
4,046,723	+		DZA65_RS18760	0.81	+0.2
4,046,724	-		DZA65_RS18760	0.81	+0.2
4,046,724	-		DZA65_RS18760	0.81	-0.7
4,046,724	-		DZA65_RS18760	0.81	-0.2
4,046,725	+		DZA65_RS18760	0.82	-0.1
4,046,796	+				+0.0
4,046,796	+				-0.4
4,046,797	-				-0.2
4,046,797	-				+0.9
4,046,797	-				-0.5
4,046,797	-				-0.1
4,046,797	-				+0.9
4,046,815	+				-0.9
4,046,815	+				-0.3
4,046,816	-				+0.0
4,046,816	-				+0.5
4,046,816	-				-0.3
4,046,849	-				+0.2
4,046,871	+				+1.0
4,046,914	+				-0.4
4,046,914	+				+0.8
4,046,914	+				+0.8
4,046,915	-				+0.3
4,046,915	-				+1.0
4,046,970	+		DZA65_RS18765	0.15	-0.6
4,046,971	-		DZA65_RS18765	0.16	-1.9
4,046,971	-		DZA65_RS18765	0.16	-0.2
4,046,993	+		DZA65_RS18765	0.18	+0.1
4,046,993	+		DZA65_RS18765	0.18	+0.4
4,046,994	-		DZA65_RS18765	0.18	-1.4
4,047,126	+		DZA65_RS18765	0.34	-2.3
4,047,163	+		DZA65_RS18765	0.38	-1.0
4,047,172	+		DZA65_RS18765	0.39	-0.0
4,047,205	+		DZA65_RS18765	0.43	+0.3
4,047,205	+		DZA65_RS18765	0.43	+0.1
4,047,205	+		DZA65_RS18765	0.43	+1.9
4,047,205	+		DZA65_RS18765	0.43	-1.1
4,047,205	+		DZA65_RS18765	0.43	-2.0
4,047,205	+		DZA65_RS18765	0.43	-0.6
4,047,205	+		DZA65_RS18765	0.43	+0.2
4,047,205	+				+1.4
4,047,205	+		DZA65_RS18765	0.43	-1.0
4,047,206	-		DZA65_RS18765	0.43	-0.6
4,047,206	-		DZA65_RS18765	0.43	+0.2
4,047,206	-		DZA65_RS18765	0.43	-0.9
4,047,206	-		DZA65_RS18765	0.43	-1.4
4,047,206	-		DZA65_RS18765	0.43	-0.6
4,047,206	-		DZA65_RS18765	0.43	+0.2
4,047,258	+		DZA65_RS18765	0.50	-1.0
4,047,259	-		DZA65_RS18765	0.50	-0.9
4,047,259	-		DZA65_RS18765	0.50	+0.8
4,047,309	+		DZA65_RS18765	0.56	-1.1
4,047,310	-		DZA65_RS18765	0.56	+0.2
4,047,359	+		DZA65_RS18765	0.61	-0.2
4,047,359	+		DZA65_RS18765	0.61	+1.2
4,047,359	+		DZA65_RS18765	0.61	-0.1
4,047,359	+		DZA65_RS18765	0.61	-0.1
4,047,360	-		DZA65_RS18765	0.62	-0.4
4,047,360	-		DZA65_RS18765	0.62	+1.3
4,047,398	-		DZA65_RS18765	0.66	+0.6
4,047,398	-		DZA65_RS18765	0.66	+1.4
4,047,415	+		DZA65_RS18765	0.68	-0.0
4,047,416	-		DZA65_RS18765	0.68	-0.5
4,047,416	-		DZA65_RS18765	0.68	+0.0
4,047,457	-		DZA65_RS18765	0.73	-0.1
4,047,486	-		DZA65_RS18765	0.76	-1.2
4,047,591	-		DZA65_RS18765	0.89	-0.4
4,047,621	+				-0.1
4,047,733	+				+0.1
4,047,733	+				-0.2
4,047,734	-				+1.4
4,047,737	-				+0.3
4,047,741	+				-0.4
4,047,799	-				+0.9
4,047,853	-				+1.2
4,047,854	+				+0.1
4,047,918	-				-1.6
4,047,927	-				+0.6
4,047,981	-		DZA65_RS18770	0.10	+0.2
4,047,986	+		DZA65_RS18770	0.10	+0.2
4,047,986	+		DZA65_RS18770	0.10	+0.8
4,047,986	+		DZA65_RS18770	0.10	+0.2
4,047,986	+		DZA65_RS18770	0.10	+0.2
4,047,986	+		DZA65_RS18770	0.10	-1.6
4,047,987	-		DZA65_RS18770	0.10	+0.0
4,047,987	-		DZA65_RS18770	0.10	-1.1
4,047,987	-		DZA65_RS18770	0.10	-1.3
4,047,987	-		DZA65_RS18770	0.10	+0.2
4,047,987	-		DZA65_RS18770	0.10	-0.2
4,047,987	-		DZA65_RS18770	0.10	-0.7
4,047,987	-		DZA65_RS18770	0.10	-2.0
4,048,006	-		DZA65_RS18770	0.12	-1.7
4,048,028	+		DZA65_RS18770	0.13	-1.2
4,048,028	+		DZA65_RS18770	0.13	+0.3
4,048,029	-		DZA65_RS18770	0.13	+0.2
4,048,029	-		DZA65_RS18770	0.13	-0.5
4,048,098	+		DZA65_RS18770	0.18	+0.1
4,048,098	+		DZA65_RS18770	0.18	-1.3
4,048,098	+		DZA65_RS18770	0.18	+0.2
4,048,098	+		DZA65_RS18770	0.18	-0.4
4,048,099	-		DZA65_RS18770	0.18	+0.9
4,048,099	-		DZA65_RS18770	0.18	-0.1
4,048,134	+		DZA65_RS18770	0.20	+0.6
4,048,134	+		DZA65_RS18770	0.20	+0.0
4,048,135	-		DZA65_RS18770	0.20	+0.1
4,048,135	-		DZA65_RS18770	0.20	+0.5
4,048,135	-		DZA65_RS18770	0.20	-0.2
4,048,135	-		DZA65_RS18770	0.20	-0.6
4,048,135	-		DZA65_RS18770	0.20	-0.2
4,048,137	+		DZA65_RS18770	0.20	-0.1
4,048,137	+		DZA65_RS18770	0.20	-0.6
4,048,137	+		DZA65_RS18770	0.20	-0.9
4,048,137	+		DZA65_RS18770	0.20	-0.7
4,048,137	+		DZA65_RS18770	0.20	+0.9
4,048,137	+		DZA65_RS18770	0.20	+0.9
4,048,137	+		DZA65_RS18770	0.20	+1.0
4,048,138	-		DZA65_RS18770	0.20	+0.0
4,048,138	-		DZA65_RS18770	0.20	+0.4
4,048,179	+		DZA65_RS18770	0.23	-0.0
4,048,179	+		DZA65_RS18770	0.23	-0.1
4,048,179	+		DZA65_RS18770	0.23	+0.9
4,048,179	+		DZA65_RS18770	0.23	-0.1
4,048,179	+		DZA65_RS18770	0.23	+0.5
4,048,179	+		DZA65_RS18770	0.23	-0.7
4,048,179	+		DZA65_RS18770	0.23	+0.4
4,048,179	+		DZA65_RS18770	0.23	-1.8
4,048,179	+		DZA65_RS18770	0.23	-0.0
4,048,179	+		DZA65_RS18770	0.23	-0.4
4,048,179	+		DZA65_RS18770	0.23	-0.7
4,048,179	+		DZA65_RS18770	0.23	+0.2
4,048,179	+		DZA65_RS18770	0.23	-0.2
4,048,179	+		DZA65_RS18770	0.23	-1.1
4,048,179	+		DZA65_RS18770	0.23	-1.0
4,048,180	-		DZA65_RS18770	0.23	-0.2
4,048,180	-		DZA65_RS18770	0.23	-1.4
4,048,180	-		DZA65_RS18770	0.23	+0.1
4,048,180	-		DZA65_RS18770	0.23	-0.3
4,048,398	+		DZA65_RS18770	0.37	-0.9
4,048,398	+		DZA65_RS18770	0.37	-2.0
4,048,398	+		DZA65_RS18770	0.37	-1.6
4,048,399	-		DZA65_RS18770	0.37	+0.1
4,048,399	-		DZA65_RS18770	0.37	-0.0
4,048,399	-		DZA65_RS18770	0.37	+0.6
4,048,399	-		DZA65_RS18770	0.37	+3.0
4,048,400	+		DZA65_RS18770	0.37	-0.6
4,048,401	-		DZA65_RS18770	0.37	+0.5
4,048,401	-		DZA65_RS18770	0.37	+0.2
4,048,401	-		DZA65_RS18770	0.37	-1.4
4,048,464	+		DZA65_RS18770	0.41	+0.3
4,048,465	-		DZA65_RS18770	0.41	-0.9
4,048,465	-		DZA65_RS18770	0.41	+0.5
4,048,465	-		DZA65_RS18770	0.41	-0.6
4,048,465	-		DZA65_RS18770	0.41	+1.1
4,048,465	-		DZA65_RS18770	0.41	-0.3
4,048,473	+		DZA65_RS18770	0.42	-0.4
4,048,485	+		DZA65_RS18770	0.42	+0.4
4,048,486	-		DZA65_RS18770	0.43	-0.2
4,048,489	-		DZA65_RS18770	0.43	-1.3
4,048,541	+		DZA65_RS18770	0.46	-1.0
4,048,541	+		DZA65_RS18770	0.46	+0.8
4,048,542	-		DZA65_RS18770	0.46	+0.5