Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17695

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,809,000	-		DZA65_RS17690	0.22	+0.2
3,809,000	-		DZA65_RS17690	0.22	-0.9
3,809,000	-		DZA65_RS17690	0.22	-2.7
3,809,050	-		DZA65_RS17690	0.26	-1.5
3,809,050	-		DZA65_RS17690	0.26	-0.5
3,809,102	+		DZA65_RS17690	0.30	-1.2
3,809,147	-		DZA65_RS17690	0.34	-2.1
3,809,292	+		DZA65_RS17690	0.46	-0.4
3,809,292	+		DZA65_RS17690	0.46	-1.1
3,809,292	+		DZA65_RS17690	0.46	-0.2
3,809,292	+				-1.7
3,809,292	+		DZA65_RS17690	0.46	+0.3
3,809,292	+		DZA65_RS17690	0.46	-1.0
3,809,292	+		DZA65_RS17690	0.46	-0.5
3,809,292	+		DZA65_RS17690	0.46	-3.4
3,809,292	+		DZA65_RS17690	0.46	-0.7
3,809,292	+		DZA65_RS17690	0.46	-0.1
3,809,292	+		DZA65_RS17690	0.46	-1.9
3,809,292	+		DZA65_RS17690	0.46	-1.2
3,809,292	+		DZA65_RS17690	0.46	-1.7
3,809,292	+		DZA65_RS17690	0.46	-1.4
3,809,292	+		DZA65_RS17690	0.46	-2.2
3,809,292	+		DZA65_RS17690	0.46	+0.5
3,809,293	-		DZA65_RS17690	0.46	-0.9
3,809,293	-		DZA65_RS17690	0.46	-0.9
3,809,293	-		DZA65_RS17690	0.46	-0.8
3,809,293	-		DZA65_RS17690	0.46	-0.9
3,809,293	-		DZA65_RS17690	0.46	-1.7
3,809,293	-		DZA65_RS17690	0.46	-0.8
3,809,293	-		DZA65_RS17690	0.46	-2.1
3,809,293	-		DZA65_RS17690	0.46	-1.7
3,809,293	-		DZA65_RS17690	0.46	-1.5
3,809,293	-		DZA65_RS17690	0.46	-1.9
3,809,293	-		DZA65_RS17690	0.46	-2.4
3,809,293	-		DZA65_RS17690	0.46	+0.1
3,809,293	-		DZA65_RS17690	0.46	-1.8
3,809,293	-		DZA65_RS17690	0.46	-1.4
3,809,293	-		DZA65_RS17690	0.46	-1.6
3,809,293	-		DZA65_RS17690	0.46	-2.1
3,809,296	+		DZA65_RS17690	0.46	-2.4
3,809,296	+		DZA65_RS17690	0.46	-1.5
3,809,297	-		DZA65_RS17690	0.46	-2.6
3,809,297	-		DZA65_RS17690	0.46	-0.9
3,809,297	-		DZA65_RS17690	0.46	-2.1
3,809,297	-		DZA65_RS17690	0.46	-1.3
3,809,297	-		DZA65_RS17690	0.46	-1.7
3,809,297	-		DZA65_RS17690	0.46	-1.2
3,809,297	-		DZA65_RS17690	0.46	-1.2
3,809,297	-		DZA65_RS17690	0.46	-1.3
3,809,397	+		DZA65_RS17690	0.54	-2.9
3,809,397	+		DZA65_RS17690	0.54	-1.0
3,809,404	+		DZA65_RS17690	0.54	+0.0
3,809,404	+		DZA65_RS17690	0.54	-2.0
3,809,529	+		DZA65_RS17690	0.64	+1.5
3,809,530	-		DZA65_RS17690	0.65	-2.1
3,809,530	-		DZA65_RS17690	0.65	-2.2
3,809,539	+		DZA65_RS17690	0.65	-1.3
3,809,619	+		DZA65_RS17690	0.72	-1.4
3,809,619	+		DZA65_RS17690	0.72	-0.9
3,809,619	+		DZA65_RS17690	0.72	-1.7
3,809,619	+		DZA65_RS17690	0.72	-1.9
3,809,619	+		DZA65_RS17690	0.72	-0.4
3,809,620	-		DZA65_RS17690	0.72	+0.1
3,809,620	-		DZA65_RS17690	0.72	-3.0
3,809,620	-		DZA65_RS17690	0.72	-1.3
3,809,620	-		DZA65_RS17690	0.72	-2.3
3,809,935	-				-2.6
3,809,935	-				-0.9
3,809,935	-				-2.0
3,809,935	-				-1.0
3,809,935	-				-1.4
3,809,935	-				-2.8
3,809,956	+				-1.3
3,809,956	+				+0.5
3,809,956	+				+0.1
3,809,986	+				-0.7
3,809,986	+				-1.2
3,809,986	+				-1.8
3,809,987	-				-1.3
3,809,987	-				-1.4
3,809,987	-				+0.4
3,809,987	-				+1.9
3,809,987	-				+0.3
3,809,987	-				+0.8
3,809,987	-				+0.2
3,809,990	+				-0.7
3,809,990	+				-0.2
3,809,991	-				+0.9
3,809,991	-				-1.7
3,809,991	-				+0.2
3,809,991	-				-1.1
3,809,991	-				-1.0
3,810,098	+		DZA65_RS17695	0.10	+0.3
3,810,098	+		DZA65_RS17695	0.10	-1.7
3,810,101	-		DZA65_RS17695	0.11	-0.4
3,810,101	-		DZA65_RS17695	0.11	-2.6
3,810,174	-		DZA65_RS17695	0.17	-1.4
3,810,293	+		DZA65_RS17695	0.28	-1.7
3,810,351	-		DZA65_RS17695	0.33	-1.4
3,810,435	+		DZA65_RS17695	0.41	-1.7
3,810,436	-		DZA65_RS17695	0.41	-0.4
3,810,436	-		DZA65_RS17695	0.41	+0.8
3,810,689	+		DZA65_RS17695	0.64	+0.1
3,810,704	+		DZA65_RS17695	0.65	-1.6
3,810,705	-		DZA65_RS17695	0.65	-1.9
3,810,717	+		DZA65_RS17695	0.66	-0.9
3,810,718	-		DZA65_RS17695	0.66	-0.7
3,810,718	-		DZA65_RS17695	0.66	-1.5
3,810,718	-		DZA65_RS17695	0.66	-1.3
3,810,808	+		DZA65_RS17695	0.75	-2.2
3,810,809	-		DZA65_RS17695	0.75	+0.8
3,810,809	-		DZA65_RS17695	0.75	+0.1
3,811,008	-				-0.2
3,811,008	-				-2.4
3,811,019	+				-1.2
3,811,062	+				-1.2
3,811,113	+				-2.6
3,811,113	+				-2.6
3,811,113	+				-1.9
3,811,113	+				-2.1
3,811,114	-				+0.2
3,811,114	-				+0.5
3,811,114	-				+0.3
3,811,115	+				-0.5
3,811,115	+				-1.2
3,811,115	+				-0.5
3,811,116	-				+0.9
3,811,116	-				+0.1
3,811,116	-				+0.6
3,811,116	-				-1.2
3,811,116	-				-0.1
3,811,119	+				-0.9
3,811,119	+				-1.1
3,811,119	+				-1.2
3,811,119	+				+1.7
3,811,119	+				-1.3
3,811,120	-				+1.7
3,811,120	-				+0.4
3,811,120	-				+0.3
3,811,123	+				+0.6
3,811,123	+				-0.8
3,811,123	+				-1.7
3,811,124	-				-0.5
3,811,124	-				+0.5
3,811,124	-				-0.2
3,811,124	-				+0.0
3,811,129	+				+0.5
3,811,141	+				-0.5
3,811,141	+				-2.2
3,811,142	-				+0.9
3,811,142	-				-1.4
3,811,158	+				-1.0
3,811,159	-				+0.3
3,811,211	+				-0.1
3,811,211	+				+0.5
3,811,211	+				+0.7
3,811,212	-				+0.7
3,811,212	-				+0.1
3,811,255	+		DZA65_RS17700	0.11	-0.5
3,811,255	+		DZA65_RS17700	0.11	+2.7
3,811,255	+		DZA65_RS17700	0.11	-0.6
3,811,256	-		DZA65_RS17700	0.11	+0.2
3,811,256	-		DZA65_RS17700	0.11	+1.7
3,811,256	-		DZA65_RS17700	0.11	-0.1
3,811,256	-		DZA65_RS17700	0.11	+1.3
3,811,312	+		DZA65_RS17700	0.25	+1.7
3,811,312	+		DZA65_RS17700	0.25	-0.5
3,811,312	+		DZA65_RS17700	0.25	-0.5
3,811,312	+		DZA65_RS17700	0.25	+1.2
3,811,312	+		DZA65_RS17700	0.25	+0.8
3,811,312	+		DZA65_RS17700	0.25	-0.1
3,811,312	+		DZA65_RS17700	0.25	+0.9
3,811,312	+		DZA65_RS17700	0.25	+0.4
3,811,312	+		DZA65_RS17700	0.25	+0.4
3,811,312	+		DZA65_RS17700	0.25	+0.7
3,811,313	-		DZA65_RS17700	0.25	-0.1
3,811,313	-		DZA65_RS17700	0.25	+0.2
3,811,313	-		DZA65_RS17700	0.25	+0.4
3,811,313	-		DZA65_RS17700	0.25	+2.5
3,811,313	-		DZA65_RS17700	0.25	+0.8
3,811,321	-		DZA65_RS17700	0.27	+0.1
3,811,376	+		DZA65_RS17700	0.41	+0.3
3,811,376	+		DZA65_RS17700	0.41	+0.3
3,811,376	+		DZA65_RS17700	0.41	+1.8
3,811,377	-		DZA65_RS17700	0.41	+1.6
3,811,377	-		DZA65_RS17700	0.41	+0.1
3,811,377	-		DZA65_RS17700	0.41	+0.3
3,811,377	-		DZA65_RS17700	0.41	+1.9
3,811,382	+		DZA65_RS17700	0.42	+0.1
3,811,382	+		DZA65_RS17700	0.42	+1.9
3,811,382	+		DZA65_RS17700	0.42	+0.2
3,811,382	+		DZA65_RS17700	0.42	+0.1
3,811,382	+		DZA65_RS17700	0.42	-0.0
3,811,382	+		DZA65_RS17700	0.42	-0.5
3,811,382	+		DZA65_RS17700	0.42	+0.3
3,811,383	-		DZA65_RS17700	0.43	-0.1
3,811,383	-		DZA65_RS17700	0.43	+1.8
3,811,383	-		DZA65_RS17700	0.43	+0.9
3,811,383	-		DZA65_RS17700	0.43	+0.5
3,811,383	-		DZA65_RS17700	0.43	-0.2
3,811,383	-		DZA65_RS17700	0.43	-0.1
3,811,456	+				+0.5
3,811,456	+		DZA65_RS17700	0.61	-0.0
3,811,457	-		DZA65_RS17700	0.61	-0.2
3,811,457	-		DZA65_RS17700	0.61	+0.3
3,811,523	+		DZA65_RS17700	0.78	-0.4
3,811,523	+		DZA65_RS17700	0.78	+1.2
3,811,523	+		DZA65_RS17700	0.78	+1.2
3,811,523	+		DZA65_RS17700	0.78	+0.7
3,811,524	-		DZA65_RS17700	0.78	-0.4
3,811,524	-		DZA65_RS17700	0.78	+0.8
3,811,524	-		DZA65_RS17700	0.78	+0.4
3,811,524	-		DZA65_RS17700	0.78	-0.9
3,811,524	-		DZA65_RS17700	0.78	-0.4
3,811,585	+				+0.4
3,811,586	-				-0.3
3,811,612	-				-0.8
3,811,713	+				+0.6
3,811,713	+				-0.2
3,811,713	+				-1.0
3,811,713	+				+0.6
3,811,713	+				-0.1
3,811,713	+				+0.6
3,811,713	+				+0.6
3,811,714	-				+0.1
3,811,714	-				+0.1
3,811,714	-				+0.4
3,811,714	-				-0.3
3,811,714	-				-0.7
3,811,714	-				+0.7
3,811,714	-				+0.2
3,811,714	-				-0.3
3,811,714	-				+0.1
3,811,714	-				-1.3
3,811,714	-				+0.1
3,811,714	-				-0.5
3,811,714	-				+0.2
3,811,714	-				+0.3
3,811,722	-				-0.0
3,811,731	+				-0.2
3,811,761	+				+0.8
3,811,761	+				+0.2
3,811,761	+				+0.5
3,811,762	-				-0.4
3,811,812	+				-2.2
3,811,812	+				-0.4
3,811,812	+				+0.2
3,811,812	+				-0.5
3,811,812	+				-0.2
3,811,812	+				-0.1
3,811,813	-				+0.3
3,811,813	-				+0.1
3,811,813	-				+0.8
3,811,813	-				-2.2
3,811,813	-				-1.2
3,811,813	-				-0.3
3,811,955	+		DZA65_RS17705	0.18	-0.9
3,811,955	+		DZA65_RS17705	0.18	+0.4
3,811,956	-		DZA65_RS17705	0.18	-0.9
3,811,956	-		DZA65_RS17705	0.18	+0.4
3,811,956	-		DZA65_RS17705	0.18	+0.1