Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16935

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,657,087	-				-1.0
3,657,087	-				+0.0
3,657,087	-				-0.1
3,657,110	-				-2.0
3,657,127	-				+0.4
3,657,136	+				-1.5
3,657,136	+				-0.4
3,657,136	+				-3.5
3,657,151	+				-2.6
3,657,151	+				-2.6
3,657,151	+				-1.9
3,657,152	-				-2.7
3,657,152	-				-0.2
3,657,234	+		DZA65_RS16930	0.19	-2.4
3,657,235	-		DZA65_RS16930	0.19	-2.7
3,657,235	-		DZA65_RS16930	0.19	-1.0
3,657,235	-		DZA65_RS16930	0.19	-3.4
3,657,235	-		DZA65_RS16930	0.19	-2.2
3,657,235	-		DZA65_RS16930	0.19	-1.5
3,657,235	-		DZA65_RS16930	0.19	-2.0
3,657,235	-		DZA65_RS16930	0.19	-1.4
3,657,262	+		DZA65_RS16930	0.24	-0.8
3,657,262	+		DZA65_RS16930	0.24	-1.3
3,657,263	-		DZA65_RS16930	0.24	+0.2
3,657,299	-		DZA65_RS16930	0.30	-4.2
3,657,299	-		DZA65_RS16930	0.30	-2.1
3,657,299	-		DZA65_RS16930	0.30	+0.0
3,657,301	+		DZA65_RS16930	0.31	-2.1
3,657,301	+				+0.4
3,657,302	-		DZA65_RS16930	0.31	-1.8
3,657,302	-		DZA65_RS16930	0.31	-1.3
3,657,338	+		DZA65_RS16930	0.37	-1.8
3,657,338	+		DZA65_RS16930	0.37	-0.9
3,657,338	+		DZA65_RS16930	0.37	-2.1
3,657,338	+		DZA65_RS16930	0.37	-3.5
3,657,338	+		DZA65_RS16930	0.37	-2.7
3,657,338	+		DZA65_RS16930	0.37	+0.5
3,657,338	+		DZA65_RS16930	0.37	-2.8
3,657,338	+		DZA65_RS16930	0.37	-0.6
3,657,338	+		DZA65_RS16930	0.37	-2.1
3,657,339	-		DZA65_RS16930	0.37	-2.5
3,657,339	-		DZA65_RS16930	0.37	-3.9
3,657,339	-		DZA65_RS16930	0.37	-2.7
3,657,339	-		DZA65_RS16930	0.37	-1.9
3,657,339	-		DZA65_RS16930	0.37	-2.9
3,657,339	-		DZA65_RS16930	0.37	-2.4
3,657,339	-		DZA65_RS16930	0.37	-1.4
3,657,339	-		DZA65_RS16930	0.37	-1.6
3,657,339	-		DZA65_RS16930	0.37	-1.3
3,657,339	-		DZA65_RS16930	0.37	-3.1
3,657,356	+		DZA65_RS16930	0.40	-1.4
3,657,356	+		DZA65_RS16930	0.40	-2.1
3,657,356	+		DZA65_RS16930	0.40	-2.3
3,657,357	-		DZA65_RS16930	0.40	-2.0
3,657,357	-		DZA65_RS16930	0.40	-1.7
3,657,384	+		DZA65_RS16930	0.45	-3.1
3,657,407	+		DZA65_RS16930	0.49	-0.9
3,657,408	-		DZA65_RS16930	0.49	-2.3
3,657,447	+		DZA65_RS16930	0.56	-2.6
3,657,447	+		DZA65_RS16930	0.56	-1.1
3,657,447	+		DZA65_RS16930	0.56	-1.7
3,657,448	-		DZA65_RS16930	0.56	-1.8
3,657,448	-		DZA65_RS16930	0.56	-1.6
3,657,472	+		DZA65_RS16930	0.60	-3.3
3,657,489	+		DZA65_RS16930	0.63	+0.2
3,657,489	+		DZA65_RS16930	0.63	-2.6
3,657,489	+		DZA65_RS16930	0.63	-1.7
3,657,489	+		DZA65_RS16930	0.63	-2.3
3,657,490	-		DZA65_RS16930	0.63	-1.6
3,657,490	-		DZA65_RS16930	0.63	-1.6
3,657,490	-		DZA65_RS16930	0.63	-1.5
3,657,490	-		DZA65_RS16930	0.63	-2.3
3,657,529	-		DZA65_RS16930	0.70	-1.0
3,657,529	-		DZA65_RS16930	0.70	-3.0
3,657,539	-		DZA65_RS16930	0.72	-3.0
3,657,539	-		DZA65_RS16930	0.72	-2.8
3,657,539	-		DZA65_RS16930	0.72	-2.2
3,657,583	-		DZA65_RS16930	0.80	-1.1
3,657,583	-		DZA65_RS16930	0.80	-3.5
3,657,607	+		DZA65_RS16930	0.84	-1.0
3,657,607	+		DZA65_RS16930	0.84	-2.4
3,657,607	+		DZA65_RS16930	0.84	-1.6
3,657,608	-		DZA65_RS16930	0.84	-1.8
3,657,608	-		DZA65_RS16930	0.84	-1.0
3,657,608	-		DZA65_RS16930	0.84	-3.3
3,657,634	+		DZA65_RS16930	0.88	-1.8
3,657,635	-		DZA65_RS16930	0.89	-2.0
3,657,635	-		DZA65_RS16930	0.89	-2.3
3,657,635	-		DZA65_RS16930	0.89	-1.0
3,657,635	-		DZA65_RS16930	0.89	-1.8
3,657,635	-		DZA65_RS16930	0.89	-1.1
3,657,686	+				-0.8
3,657,707	+				-1.7
3,657,707	+				-1.8
3,657,707	+				-2.7
3,657,707	+				-1.8
3,657,707	+				-2.1
3,657,707	+				-1.6
3,657,707	+				-2.9
3,657,707	+				-1.6
3,657,707	+				-1.2
3,657,708	-				-1.6
3,657,708	-				-1.4
3,657,708	-				-1.8
3,657,708	-				-1.5
3,657,708	-				-1.8
3,657,738	+				-1.3
3,657,738	+				-3.3
3,657,738	+				-0.8
3,657,738	+				-0.6
3,657,739	-				+0.6
3,657,739	-				-0.6
3,657,748	-				+0.3
3,657,748	-				+0.3
3,657,748	-				+0.1
3,657,748	-				-1.3
3,657,759	+				-0.8
3,657,759	+				-1.2
3,657,759	+				-1.2
3,657,759	+				-0.8
3,657,759	+				+0.0
3,657,759	+				-0.9
3,657,759	+				-1.8
3,657,759	+				-0.5
3,657,759	+				+1.2
3,657,759	+				-0.4
3,657,759	+				-1.5
3,657,759	+				-0.1
3,657,760	-				-0.2
3,657,760	-				+1.0
3,657,760	-				+0.7
3,657,760	-				-0.6
3,657,760	-				-0.3
3,657,760	-				+0.4
3,657,760	-				+0.0
3,657,760	-				+0.0
3,657,760	-				+0.8
3,657,761	+				-0.6
3,657,761	+				+0.7
3,657,761	+				-0.3
3,657,761	+				-1.3
3,657,761	+				-0.8
3,657,761	+				+0.0
3,657,761	+				-0.1
3,657,761	+				-1.0
3,657,762	-				+0.3
3,657,762	-				+0.6
3,657,762	-				+0.1
3,657,762	-				+0.0
3,657,762	-				+0.6
3,657,762	-				-1.2
3,657,762	-				+0.0
3,657,762	-				-0.9
3,657,762	-				+1.0
3,657,762	-				-0.6
3,657,762	-				-0.6
3,657,762	-				-1.2
3,657,779	+				-1.2
3,657,788	-				+0.5
3,657,788	-				+0.0
3,657,792	+				-0.8
3,657,798	+				+0.5
3,657,805	+				-0.4
3,657,806	-				-0.2
3,657,806	-				+0.3
3,657,872	+				+0.3
3,657,872	+				-0.1
3,657,872	+				-0.4
3,657,873	-				+1.0
3,657,873	-				-0.5
3,657,873	-				-0.5
3,657,873	-				-0.3
3,657,890	+				-0.3
3,657,908	-				-1.5
3,657,908	-				+0.0
3,657,939	+				-0.7
3,657,939	+				+0.1
3,657,939	+				-0.7
3,657,939	+				+0.4
3,657,969	+				-0.3
3,657,989	+				+2.8
3,657,995	-				-0.1
3,658,047	+				-0.1
3,658,047	+				-0.6
3,658,047	+				-0.4
3,658,047	+				+0.5
3,658,047	+				-0.3
3,658,047	+				-0.3
3,658,047	+				+0.2
3,658,048	-				+0.5
3,658,048	-				+0.6
3,658,066	+				-0.2
3,658,066	+				-0.7
3,658,066	+				-1.1
3,658,067	-				-0.2
3,658,067	-				-0.4
3,658,079	+				-0.3
3,658,079	+				-0.8
3,658,079	+				-0.9
3,658,079	+				-1.3
3,658,079	+				-1.5
3,658,080	-				-0.1
3,658,080	-				-0.4
3,658,182	+				-0.3
3,658,189	+				-0.6
3,658,189	+				-0.6
3,658,189	+				-1.6
3,658,189	+				-1.7
3,658,190	-				+1.0
3,658,302	+		DZA65_RS16935	0.16	-0.2
3,658,311	+		DZA65_RS16935	0.16	-0.4
3,658,431	+		DZA65_RS16935	0.24	-0.8
3,658,432	-		DZA65_RS16935	0.24	-0.7
3,658,432	-		DZA65_RS16935	0.24	-1.1
3,658,490	+		DZA65_RS16935	0.28	-0.1
3,658,490	+		DZA65_RS16935	0.28	-0.2
3,658,490	+		DZA65_RS16935	0.28	-2.0
3,658,491	-		DZA65_RS16935	0.28	-0.7
3,658,491	-		DZA65_RS16935	0.28	-2.2
3,658,491	-				+0.0
3,658,491	-		DZA65_RS16935	0.28	+1.1
3,658,586	+		DZA65_RS16935	0.34	-1.2
3,658,594	+		DZA65_RS16935	0.34	-2.3
3,658,594	+		DZA65_RS16935	0.34	-1.7
3,658,595	-		DZA65_RS16935	0.34	-0.7
3,658,678	+		DZA65_RS16935	0.39	-1.1
3,658,679	-		DZA65_RS16935	0.39	-1.3
3,658,679	-		DZA65_RS16935	0.39	-2.6
3,658,679	-		DZA65_RS16935	0.39	-0.6
3,658,684	+		DZA65_RS16935	0.40	-0.2
3,658,684	+		DZA65_RS16935	0.40	-2.2
3,658,684	+		DZA65_RS16935	0.40	-0.2
3,658,684	+		DZA65_RS16935	0.40	-1.6
3,658,685	-		DZA65_RS16935	0.40	-1.2
3,658,685	-		DZA65_RS16935	0.40	-1.5
3,658,685	-		DZA65_RS16935	0.40	-0.6
3,658,725	+		DZA65_RS16935	0.42	-1.2
3,658,725	+		DZA65_RS16935	0.42	-0.8
3,658,725	+		DZA65_RS16935	0.42	-2.6
3,658,725	+		DZA65_RS16935	0.42	-0.1
3,658,726	-		DZA65_RS16935	0.42	-1.1
3,658,726	-		DZA65_RS16935	0.42	-1.3
3,658,726	-		DZA65_RS16935	0.42	-2.6
3,658,792	+		DZA65_RS16935	0.46	-0.7
3,658,792	+		DZA65_RS16935	0.46	+0.2
3,658,792	+		DZA65_RS16935	0.46	+0.0
3,658,792	+		DZA65_RS16935	0.46	-2.4
3,658,793	-		DZA65_RS16935	0.47	-0.8
3,658,793	-		DZA65_RS16935	0.47	+0.5
3,658,793	-		DZA65_RS16935	0.47	-0.6
3,658,809	+		DZA65_RS16935	0.48	-0.2
3,658,810	-		DZA65_RS16935	0.48	-2.5
3,658,878	+		DZA65_RS16935	0.52	-1.5
3,658,878	+		DZA65_RS16935	0.52	-1.0
3,658,879	-		DZA65_RS16935	0.52	-1.5
3,658,879	-		DZA65_RS16935	0.52	-1.3
3,658,921	-		DZA65_RS16935	0.54	-1.6
3,658,975	+		DZA65_RS16935	0.58	+0.2
3,658,975	+		DZA65_RS16935	0.58	-0.2
3,658,975	+		DZA65_RS16935	0.58	-0.6
3,658,975	+		DZA65_RS16935	0.58	+0.3
3,658,975	+		DZA65_RS16935	0.58	+0.3
3,658,975	+		DZA65_RS16935	0.58	-0.4
3,658,975	+		DZA65_RS16935	0.58	+0.7
3,658,975	+		DZA65_RS16935	0.58	-2.5
3,658,975	+		DZA65_RS16935	0.58	-1.3
3,658,976	-		DZA65_RS16935	0.58	+0.6
3,658,976	-		DZA65_RS16935	0.58	-1.0
3,658,976	-		DZA65_RS16935	0.58	+0.4
3,658,976	-		DZA65_RS16935	0.58	-0.8
3,658,976	-		DZA65_RS16935	0.58	+0.2
3,658,976	-		DZA65_RS16935	0.58	-1.8
3,658,976	-		DZA65_RS16935	0.58	-0.3
3,659,029	-		DZA65_RS16935	0.61	-0.6
3,659,029	-		DZA65_RS16935	0.61	-0.4
3,659,101	+				-1.8
3,659,102	-		DZA65_RS16935	0.66	-0.6
3,659,102	-		DZA65_RS16935	0.66	-0.5
3,659,159	-		DZA65_RS16935	0.69	-1.5
3,659,180	-		DZA65_RS16935	0.71	-1.7
3,659,180	-		DZA65_RS16935	0.71	-0.5
3,659,182	-		DZA65_RS16935	0.71	-0.5
3,659,182	-		DZA65_RS16935	0.71	+0.0
3,659,240	-		DZA65_RS16935	0.74	-0.4
3,659,240	-		DZA65_RS16935	0.74	-1.2
3,659,240	-		DZA65_RS16935	0.74	-0.4
3,659,240	-		DZA65_RS16935	0.74	-2.5
3,659,240	-		DZA65_RS16935	0.74	-2.3
3,659,375	+		DZA65_RS16935	0.83	-0.6
3,659,375	+		DZA65_RS16935	0.83	-1.6
3,659,375	+		DZA65_RS16935	0.83	+1.0
3,659,375	+		DZA65_RS16935	0.83	-0.7
3,659,375	+		DZA65_RS16935	0.83	-0.1
3,659,376	-		DZA65_RS16935	0.83	-2.7
3,659,376	-		DZA65_RS16935	0.83	-0.6
3,659,376	-		DZA65_RS16935	0.83	+0.6
3,659,376	-		DZA65_RS16935	0.83	-0.4
3,659,376	-				+0.4
3,659,376	-		DZA65_RS16935	0.83	+0.0
3,659,381	+		DZA65_RS16935	0.83	+0.2
3,659,382	-		DZA65_RS16935	0.83	-1.7
3,659,382	-		DZA65_RS16935	0.83	-1.7
3,659,395	+		DZA65_RS16935	0.84	-1.5
3,659,445	+		DZA65_RS16935	0.87	-1.2
3,659,446	-		DZA65_RS16935	0.87	-1.1
3,659,446	-		DZA65_RS16935	0.87	+0.8
3,659,476	+		DZA65_RS16935	0.89	-2.1
3,659,476	+		DZA65_RS16935	0.89	-2.2
3,659,476	+		DZA65_RS16935	0.89	-1.1
3,659,476	+		DZA65_RS16935	0.89	-0.5
3,659,477	-		DZA65_RS16935	0.89	-1.2
3,659,477	-		DZA65_RS16935	0.89	-1.9
3,659,477	-		DZA65_RS16935	0.89	-1.1
3,659,477	-		DZA65_RS16935	0.89	-2.6
3,659,477	-		DZA65_RS16935	0.89	-1.6
3,659,477	-		DZA65_RS16935	0.89	-2.0
3,659,477	-		DZA65_RS16935	0.89	-1.5
3,659,477	-		DZA65_RS16935	0.89	-0.7
3,659,479	+		DZA65_RS16935	0.89	-0.6
3,659,479	+		DZA65_RS16935	0.89	+0.4
3,659,479	+		DZA65_RS16935	0.89	-1.1
3,659,480	-		DZA65_RS16935	0.89	+0.1
3,659,480	-		DZA65_RS16935	0.89	-1.3
3,659,480	-		DZA65_RS16935	0.89	+0.0
3,659,480	-		DZA65_RS16935	0.89	-2.9
3,659,516	+				-2.0
3,659,516	+				+1.3
3,659,517	-				-1.2
3,659,520	+				-1.3
3,659,520	+				-1.3
3,659,520	+				-1.7
3,659,521	-				-1.4
3,659,590	+				-0.6
3,659,590	+				-1.0
3,659,590	+				-0.5
3,659,590	+				-1.4
3,659,591	-				-1.4
3,659,591	-				-2.7
3,659,728	+				+0.4
3,659,735	+				-0.4
3,659,736	-				+0.2
3,659,736	-				+0.1
3,659,736	-				-1.3
3,659,739	+				+0.0
3,659,740	-				-1.0
3,659,750	+				-0.6
3,659,759	-				+0.7
3,659,762	-				-0.8
3,659,769	+				-0.6
3,659,770	-				-0.3
3,659,773	+				+0.7
3,659,778	-				-0.4
3,659,813	+				+0.7
3,660,001	+		DZA65_RS16940	0.32	-0.2
3,660,001	+		DZA65_RS16940	0.32	+0.6
3,660,002	-		DZA65_RS16940	0.32	-0.5
3,660,075	+		DZA65_RS16940	0.42	+1.4
3,660,076	-		DZA65_RS16940	0.42	+0.4
3,660,076	-		DZA65_RS16940	0.42	-0.3
3,660,078	-		DZA65_RS16940	0.42	-1.5
3,660,128	+		DZA65_RS16940	0.49	-0.1
3,660,128	+		DZA65_RS16940	0.49	+0.4
3,660,129	-		DZA65_RS16940	0.49	-0.0
3,660,129	-		DZA65_RS16940	0.49	-2.7
3,660,129	-		DZA65_RS16940	0.49	+0.8
3,660,138	+		DZA65_RS16940	0.50	-0.1
3,660,163	+		DZA65_RS16940	0.54	+0.1
3,660,179	+		DZA65_RS16940	0.56	+0.5
3,660,179	+		DZA65_RS16940	0.56	+0.6
3,660,180	-		DZA65_RS16940	0.56	+0.3
3,660,189	+		DZA65_RS16940	0.57	-1.1
3,660,240	+		DZA65_RS16940	0.64	-1.5
3,660,240	+		DZA65_RS16940	0.64	-0.5
3,660,240	+		DZA65_RS16940	0.64	-0.1
3,660,240	+		DZA65_RS16940	0.64	+0.2
3,660,241	-		DZA65_RS16940	0.64	-0.6
3,660,241	-		DZA65_RS16940	0.64	+0.0
3,660,241	-		DZA65_RS16940	0.64	-2.0
3,660,463	-				+0.8
3,660,463	-				-0.6
3,660,489	+				-0.4
3,660,489	+				-1.0
3,660,489	+				+0.3
3,660,489	+				+1.3
3,660,490	-				-0.1
3,660,490	-				-0.3
3,660,490	-				-0.1
3,660,490	-				-2.3
3,660,490	-				-0.2
3,660,490	-				-0.9
3,660,520	+				+0.6
3,660,521	-				+0.1
3,660,521	-				-0.3
3,660,521	-				+0.5
3,660,521	-				-1.9
3,660,537	+				+0.3
3,660,542	+				+0.7
3,660,542	+				+1.4
3,660,542	+				-1.0
3,660,542	+				+0.1
3,660,542	+				+0.0
3,660,542	+				-1.8
3,660,542	+				+0.1
3,660,543	-				+0.5
3,660,543	-				-1.3
3,660,543	-				-0.8
3,660,543	-				-1.5
3,660,543	-				+0.9
3,660,543	-				+0.4
3,660,543	-				-0.4
3,660,612	+				-0.4
3,660,612	+				-0.6
3,660,613	-				-0.6
3,660,613	-				-0.2
3,660,613	-				+0.8
3,660,613	-				-0.2
3,660,614	+				+1.3
3,660,615	-				+1.7
3,660,615	-				-1.8
3,660,615	-				-0.6
3,660,636	+				-2.0
3,660,636	+				-0.1
3,660,636	+				-1.8
3,660,637	-				+0.2
3,660,637	-				+0.1
3,660,637	-				+0.6
3,660,637	-				+1.9
3,660,637	-				-1.8
3,660,637	-				+1.0
3,660,637	-				-0.4
3,660,637	-				+1.1