Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15585

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,385,154	+		DZA65_RS15580	0.49	+0.6
3,385,155	-		DZA65_RS15580	0.49	-1.1
3,385,155	-		DZA65_RS15580	0.49	-0.8
3,385,203	+		DZA65_RS15580	0.53	-2.0
3,385,203	+		DZA65_RS15580	0.53	-0.7
3,385,253	+		DZA65_RS15580	0.57	-0.7
3,385,253	+		DZA65_RS15580	0.57	-1.4
3,385,254	-		DZA65_RS15580	0.57	-2.3
3,385,503	+		DZA65_RS15580	0.76	-1.7
3,385,503	+		DZA65_RS15580	0.76	-0.5
3,385,503	+		DZA65_RS15580	0.76	+1.2
3,385,503	+		DZA65_RS15580	0.76	+0.5
3,385,503	+		DZA65_RS15580	0.76	-1.5
3,385,503	+		DZA65_RS15580	0.76	-1.1
3,385,504	-		DZA65_RS15580	0.76	-1.4
3,385,504	-		DZA65_RS15580	0.76	-1.7
3,385,615	+		DZA65_RS15580	0.84	-0.7
3,385,615	+		DZA65_RS15580	0.84	-0.4
3,385,623	+		DZA65_RS15580	0.85	+0.0
3,385,623	+		DZA65_RS15580	0.85	-2.2
3,385,623	+		DZA65_RS15580	0.85	-1.9
3,385,623	+		DZA65_RS15580	0.85	-0.7
3,385,624	-		DZA65_RS15580	0.85	-1.9
3,385,624	-		DZA65_RS15580	0.85	-2.7
3,385,624	-		DZA65_RS15580	0.85	-1.1
3,385,884	-				+0.1
3,385,896	+				+0.3
3,385,897	-				+0.1
3,385,897	-				-2.0
3,385,897	-				-0.9
3,385,915	+				-0.2
3,386,081	+				-1.0
3,386,083	+				-1.1
3,386,084	-				-1.4
3,386,084	-				-2.2
3,386,084	-				-1.7
3,386,097	+				-0.7
3,386,097	+				-0.4
3,386,097	+				-1.1
3,386,099	+				-0.7
3,386,100	-				-0.9
3,386,107	-				-3.0
3,386,107	-				-0.4
3,386,139	+				-0.6
3,386,139	+				-2.5
3,386,151	+				-1.3
3,386,151	+				-0.7
3,386,188	-				-0.7
3,386,190	+				-0.2
3,386,400	-		DZA65_RS15585	0.12	-1.9
3,386,456	-		DZA65_RS15585	0.15	-1.7
3,386,456	-		DZA65_RS15585	0.15	-1.7
3,386,479	+		DZA65_RS15585	0.16	-4.6
3,386,560	+		DZA65_RS15585	0.19	-1.6
3,386,561	-		DZA65_RS15585	0.19	-1.1
3,386,561	-		DZA65_RS15585	0.19	-3.3
3,386,663	+		DZA65_RS15585	0.24	-2.1
3,386,663	+		DZA65_RS15585	0.24	-1.2
3,386,663	+		DZA65_RS15585	0.24	-1.6
3,386,664	-		DZA65_RS15585	0.24	-1.6
3,386,664	-		DZA65_RS15585	0.24	-1.4
3,386,664	-		DZA65_RS15585	0.24	-2.7
3,386,715	+		DZA65_RS15585	0.26	-1.8
3,386,715	+		DZA65_RS15585	0.26	-1.4
3,386,716	-		DZA65_RS15585	0.26	-0.9
3,386,726	+		DZA65_RS15585	0.27	-0.9
3,386,726	+		DZA65_RS15585	0.27	-0.8
3,386,726	+		DZA65_RS15585	0.27	-3.3
3,386,726	+		DZA65_RS15585	0.27	-1.1
3,386,727	-		DZA65_RS15585	0.27	-1.5
3,386,727	-		DZA65_RS15585	0.27	-2.1
3,386,727	-		DZA65_RS15585	0.27	-1.7
3,386,727	-		DZA65_RS15585	0.27	-2.4
3,386,727	-		DZA65_RS15585	0.27	+0.1
3,386,810	-		DZA65_RS15585	0.31	-1.5
3,386,923	-		DZA65_RS15585	0.36	-1.5
3,386,923	-		DZA65_RS15585	0.36	-1.4
3,387,013	+		DZA65_RS15585	0.40	-2.8
3,387,014	-		DZA65_RS15585	0.40	-1.5
3,387,014	-		DZA65_RS15585	0.40	-1.5
3,387,045	+		DZA65_RS15585	0.41	-0.7
3,387,045	+		DZA65_RS15585	0.41	-0.5
3,387,046	-		DZA65_RS15585	0.41	-2.4
3,387,046	-		DZA65_RS15585	0.41	-1.9
3,387,049	+		DZA65_RS15585	0.41	-0.1
3,387,049	+		DZA65_RS15585	0.41	-1.8
3,387,049	+		DZA65_RS15585	0.41	-0.3
3,387,049	+		DZA65_RS15585	0.41	-1.5
3,387,049	+		DZA65_RS15585	0.41	-2.1
3,387,049	+		DZA65_RS15585	0.41	-0.7
3,387,049	+		DZA65_RS15585	0.41	-1.4
3,387,049	+		DZA65_RS15585	0.41	-0.5
3,387,050	-		DZA65_RS15585	0.41	-1.7
3,387,050	-		DZA65_RS15585	0.41	-2.8
3,387,050	-		DZA65_RS15585	0.41	-1.4
3,387,050	-		DZA65_RS15585	0.41	-1.1
3,387,050	-		DZA65_RS15585	0.41	-1.4
3,387,050	-		DZA65_RS15585	0.41	-2.5
3,387,086	-		DZA65_RS15585	0.43	-2.7
3,387,086	-		DZA65_RS15585	0.43	-0.7
3,387,087	+		DZA65_RS15585	0.43	-1.7
3,387,087	+		DZA65_RS15585	0.43	-2.8
3,387,088	-		DZA65_RS15585	0.43	-0.8
3,387,088	-		DZA65_RS15585	0.43	-0.9
3,387,150	-		DZA65_RS15585	0.46	+1.5
3,387,160	+		DZA65_RS15585	0.46	-1.1
3,387,160	+		DZA65_RS15585	0.46	-3.1
3,387,161	-		DZA65_RS15585	0.47	-2.1
3,387,161	-		DZA65_RS15585	0.47	+0.9
3,387,161	-		DZA65_RS15585	0.47	-0.5
3,387,161	-		DZA65_RS15585	0.47	-2.8
3,387,161	-		DZA65_RS15585	0.47	-2.4
3,387,161	-		DZA65_RS15585	0.47	-3.0
3,387,166	+		DZA65_RS15585	0.47	-1.1
3,387,166	+		DZA65_RS15585	0.47	-2.2
3,387,167	-		DZA65_RS15585	0.47	-1.7
3,387,167	-		DZA65_RS15585	0.47	-0.5
3,387,167	-		DZA65_RS15585	0.47	-1.0
3,387,175	+		DZA65_RS15585	0.47	-2.1
3,387,175	+		DZA65_RS15585	0.47	-0.7
3,387,175	+		DZA65_RS15585	0.47	-1.9
3,387,175	+		DZA65_RS15585	0.47	-1.2
3,387,176	-		DZA65_RS15585	0.47	-0.9
3,387,177	+		DZA65_RS15585	0.47	-2.3
3,387,177	+		DZA65_RS15585	0.47	-1.9
3,387,178	-		DZA65_RS15585	0.47	-1.3
3,387,205	-		DZA65_RS15585	0.49	-1.5
3,387,298	-		DZA65_RS15585	0.53	-3.2
3,387,298	-		DZA65_RS15585	0.53	-1.7
3,387,306	+		DZA65_RS15585	0.53	-1.9
3,387,306	+		DZA65_RS15585	0.53	-2.8
3,387,306	+		DZA65_RS15585	0.53	-0.1
3,387,306	+		DZA65_RS15585	0.53	-0.7
3,387,306	+		DZA65_RS15585	0.53	-3.4
3,387,306	+		DZA65_RS15585	0.53	-1.1
3,387,306	+		DZA65_RS15585	0.53	-0.1
3,387,306	+		DZA65_RS15585	0.53	-3.7
3,387,307	-		DZA65_RS15585	0.53	-2.1
3,387,307	-		DZA65_RS15585	0.53	-2.1
3,387,307	-		DZA65_RS15585	0.53	-0.4
3,387,307	-		DZA65_RS15585	0.53	-2.5
3,387,307	-		DZA65_RS15585	0.53	-2.3
3,387,307	-		DZA65_RS15585	0.53	-2.3
3,387,307	-		DZA65_RS15585	0.53	-3.3
3,387,307	-		DZA65_RS15585	0.53	-2.5
3,387,307	-		DZA65_RS15585	0.53	-1.7
3,387,307	-		DZA65_RS15585	0.53	-0.1
3,387,307	-		DZA65_RS15585	0.53	-2.3
3,387,307	-		DZA65_RS15585	0.53	-3.2
3,387,307	-		DZA65_RS15585	0.53	-1.1
3,387,328	+		DZA65_RS15585	0.54	-0.8
3,387,329	-		DZA65_RS15585	0.54	-1.9
3,387,349	+		DZA65_RS15585	0.55	-1.9
3,387,349	+		DZA65_RS15585	0.55	-1.5
3,387,350	-		DZA65_RS15585	0.55	-1.3
3,387,350	-		DZA65_RS15585	0.55	-1.5
3,387,355	+		DZA65_RS15585	0.55	-2.4
3,387,355	+		DZA65_RS15585	0.55	-2.0
3,387,355	+		DZA65_RS15585	0.55	-3.0
3,387,356	-		DZA65_RS15585	0.55	-1.7
3,387,356	-		DZA65_RS15585	0.55	-0.5
3,387,356	-		DZA65_RS15585	0.55	-1.1
3,387,379	+		DZA65_RS15585	0.56	-0.4
3,387,379	+		DZA65_RS15585	0.56	-0.6
3,387,380	-		DZA65_RS15585	0.56	-0.7
3,387,406	+		DZA65_RS15585	0.58	+0.3
3,387,406	+		DZA65_RS15585	0.58	-1.0
3,387,418	+		DZA65_RS15585	0.58	-2.1
3,387,419	-		DZA65_RS15585	0.58	-0.7
3,387,419	-		DZA65_RS15585	0.58	-1.1
3,387,419	-		DZA65_RS15585	0.58	-1.4
3,387,419	-		DZA65_RS15585	0.58	-2.0
3,387,419	-				-0.7
3,387,419	-		DZA65_RS15585	0.58	-1.7
3,387,419	-		DZA65_RS15585	0.58	-2.1
3,387,457	+		DZA65_RS15585	0.60	-0.7
3,387,458	-		DZA65_RS15585	0.60	-0.3
3,387,458	-		DZA65_RS15585	0.60	-1.3
3,387,458	-		DZA65_RS15585	0.60	-0.7
3,387,487	+		DZA65_RS15585	0.61	-1.4
3,387,488	-		DZA65_RS15585	0.61	-0.1
3,387,488	-		DZA65_RS15585	0.61	-1.9
3,387,488	-		DZA65_RS15585	0.61	-2.7
3,387,488	-		DZA65_RS15585	0.61	-2.7
3,387,488	-		DZA65_RS15585	0.61	-1.9
3,387,558	-		DZA65_RS15585	0.64	-0.7
3,387,558	-		DZA65_RS15585	0.64	+0.9
3,387,634	+		DZA65_RS15585	0.68	-1.8
3,387,661	+		DZA65_RS15585	0.69	-1.5
3,387,661	+		DZA65_RS15585	0.69	-1.4
3,387,662	-		DZA65_RS15585	0.69	-2.4
3,387,670	+		DZA65_RS15585	0.70	+0.1
3,387,670	+		DZA65_RS15585	0.70	-2.7
3,387,670	+		DZA65_RS15585	0.70	-1.7
3,387,670	+		DZA65_RS15585	0.70	-2.3
3,387,671	-		DZA65_RS15585	0.70	-2.6
3,387,671	-		DZA65_RS15585	0.70	-1.7
3,387,675	+		DZA65_RS15585	0.70	+0.3
3,387,675	+		DZA65_RS15585	0.70	-0.8
3,387,675	+		DZA65_RS15585	0.70	-2.3
3,387,675	+		DZA65_RS15585	0.70	-0.3
3,387,675	+		DZA65_RS15585	0.70	-2.1
3,387,675	+		DZA65_RS15585	0.70	-2.0
3,387,676	-		DZA65_RS15585	0.70	-1.1
3,387,676	-		DZA65_RS15585	0.70	-1.1
3,387,676	-		DZA65_RS15585	0.70	+0.3
3,387,786	+		DZA65_RS15585	0.75	-2.5
3,387,786	+		DZA65_RS15585	0.75	-1.5
3,387,786	+		DZA65_RS15585	0.75	-3.1
3,387,786	+		DZA65_RS15585	0.75	+0.7
3,387,786	+		DZA65_RS15585	0.75	-1.7
3,387,787	-		DZA65_RS15585	0.75	-1.1
3,387,787	-		DZA65_RS15585	0.75	-0.3
3,387,838	+		DZA65_RS15585	0.77	-0.3
3,387,838	+		DZA65_RS15585	0.77	-0.7
3,387,838	+		DZA65_RS15585	0.77	+0.9
3,387,838	+		DZA65_RS15585	0.77	+0.1
3,387,838	+		DZA65_RS15585	0.77	-1.1
3,387,839	-		DZA65_RS15585	0.77	-0.8
3,387,839	-		DZA65_RS15585	0.77	-1.9
3,387,839	-		DZA65_RS15585	0.77	-1.8
3,387,839	-		DZA65_RS15585	0.77	-1.7
3,387,840	+		DZA65_RS15585	0.77	-0.4
3,387,840	+		DZA65_RS15585	0.77	-3.3
3,387,856	+		DZA65_RS15585	0.78	-2.5
3,387,856	+		DZA65_RS15585	0.78	-1.0
3,387,856	+		DZA65_RS15585	0.78	-1.3
3,387,856	+		DZA65_RS15585	0.78	-1.2
3,387,856	+		DZA65_RS15585	0.78	+0.7
3,387,856	+		DZA65_RS15585	0.78	-1.4
3,387,857	-				-0.1
3,387,857	-		DZA65_RS15585	0.78	-2.8
3,387,905	+		DZA65_RS15585	0.80	-0.3
3,387,905	+		DZA65_RS15585	0.80	-1.3
3,387,906	-		DZA65_RS15585	0.80	-1.9
3,387,906	-		DZA65_RS15585	0.80	-1.2
3,387,906	-		DZA65_RS15585	0.80	-2.5
3,387,906	-		DZA65_RS15585	0.80	-0.9
3,387,946	+		DZA65_RS15585	0.82	-2.1
3,387,946	+		DZA65_RS15585	0.82	-0.1
3,387,947	-		DZA65_RS15585	0.82	-1.1
3,387,947	-		DZA65_RS15585	0.82	-0.7
3,387,947	-		DZA65_RS15585	0.82	-2.0
3,387,947	-		DZA65_RS15585	0.82	-2.6
3,387,947	-		DZA65_RS15585	0.82	-2.9
3,387,947	-		DZA65_RS15585	0.82	-1.5
3,387,952	+		DZA65_RS15585	0.82	-1.0
3,387,952	+		DZA65_RS15585	0.82	-1.3
3,387,952	+		DZA65_RS15585	0.82	-0.0
3,387,952	+		DZA65_RS15585	0.82	-2.1
3,387,952	+		DZA65_RS15585	0.82	+0.3
3,387,953	-		DZA65_RS15585	0.82	-1.4
3,387,953	-		DZA65_RS15585	0.82	-0.3
3,387,953	-		DZA65_RS15585	0.82	-1.3
3,387,955	-		DZA65_RS15585	0.82	+0.1
3,388,048	+		DZA65_RS15585	0.87	-1.9
3,388,048	+		DZA65_RS15585	0.87	-1.9
3,388,048	+		DZA65_RS15585	0.87	-1.7
3,388,048	+		DZA65_RS15585	0.87	-1.5
3,388,048	+		DZA65_RS15585	0.87	-2.4
3,388,049	-		DZA65_RS15585	0.87	+0.4
3,388,049	-		DZA65_RS15585	0.87	-2.1
3,388,049	-		DZA65_RS15585	0.87	-1.7
3,388,049	-		DZA65_RS15585	0.87	-1.1
3,388,049	-		DZA65_RS15585	0.87	-1.4
3,388,102	+		DZA65_RS15585	0.89	-1.7
3,388,102	+		DZA65_RS15585	0.89	-0.7
3,388,102	+		DZA65_RS15585	0.89	-0.8
3,388,102	+		DZA65_RS15585	0.89	-0.2
3,388,103	-		DZA65_RS15585	0.89	-1.1
3,388,103	-		DZA65_RS15585	0.89	-1.7
3,388,103	-		DZA65_RS15585	0.89	-3.3
3,388,118	-		DZA65_RS15585	0.90	-2.5
3,388,153	+				-1.7
3,388,153	+				-1.9
3,388,153	+				-1.6
3,388,154	-				-1.8
3,388,162	+				-0.8
3,388,162	+				-1.4
3,388,162	+				-0.8
3,388,162	+				-2.3
3,388,223	+				-1.1
3,388,224	-				-1.0
3,388,224	-				-0.4
3,388,224	-				-1.1
3,388,224	-				-1.1
3,388,240	-				-0.4
3,388,258	+				-0.4
3,388,258	+				-1.6
3,388,258	+				-1.9
3,388,259	-				-0.5
3,388,259	-				-2.4
3,388,259	-				+0.4
3,388,259	-				-2.3
3,388,294	+				-1.6
3,388,294	+				-1.8
3,388,294	+				-2.2
3,388,295	-				-1.0
3,388,295	-				-0.8
3,388,295	-				-2.3
3,388,295	-				-0.7
3,388,339	+				-0.3
3,388,339	+				-1.2
3,388,339	+				-0.7
3,388,339	+				-2.6
3,388,340	-				-2.7
3,388,340	-				-1.2
3,388,447	+				+0.5
3,388,447	+				-0.7
3,388,447	+				-1.7
3,388,448	-				+0.7
3,388,448	-				-1.6
3,388,448	-				-0.3
3,388,448	-				-0.2
3,388,448	-				+0.5
3,388,453	+				+0.5
3,388,454	-				+0.5
3,388,454	-				+1.5
3,388,567	-				-0.7
3,388,678	+		DZA65_RS15590	0.18	+1.1
3,388,730	-		DZA65_RS15590	0.23	-0.9
3,388,777	+		DZA65_RS15590	0.27	+0.2
3,388,777	+		DZA65_RS15590	0.27	+1.2
3,388,778	-		DZA65_RS15590	0.27	-0.3
3,388,801	+		DZA65_RS15590	0.29	+0.0
3,388,802	-		DZA65_RS15590	0.29	+0.3
3,388,832	+		DZA65_RS15590	0.31	+0.6
3,388,832	+		DZA65_RS15590	0.31	-1.2
3,388,832	+		DZA65_RS15590	0.31	+0.1
3,388,832	+		DZA65_RS15590	0.31	-0.0
3,388,833	-		DZA65_RS15590	0.31	-0.4
3,388,833	-		DZA65_RS15590	0.31	+1.1
3,388,964	+		DZA65_RS15590	0.42	-0.4
3,388,964	+		DZA65_RS15590	0.42	+0.1
3,388,965	-		DZA65_RS15590	0.42	-0.1
3,388,965	-		DZA65_RS15590	0.42	-1.0
3,388,965	-		DZA65_RS15590	0.42	+1.4
3,388,965	-		DZA65_RS15590	0.42	+0.1
3,388,965	-		DZA65_RS15590	0.42	-0.6
3,388,986	+		DZA65_RS15590	0.44	+0.4
3,388,986	+		DZA65_RS15590	0.44	-0.7
3,388,986	+		DZA65_RS15590	0.44	+0.0
3,388,986	+		DZA65_RS15590	0.44	+0.1
3,388,986	+		DZA65_RS15590	0.44	-0.7
3,388,987	-		DZA65_RS15590	0.44	-0.2
3,389,052	-		DZA65_RS15590	0.50	+0.1
3,389,052	-		DZA65_RS15590	0.50	+0.4
3,389,052	-		DZA65_RS15590	0.50	-0.8
3,389,052	-		DZA65_RS15590	0.50	+0.1