Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15545

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,369,740	+		DZA65_RS15540	0.11	-1.9
3,369,741	-		DZA65_RS15540	0.11	-0.7
3,369,741	-		DZA65_RS15540	0.11	-0.3
3,369,796	-		DZA65_RS15540	0.17	-1.4
3,369,871	-		DZA65_RS15540	0.25	+0.3
3,369,871	-		DZA65_RS15540	0.25	-2.1
3,369,946	+		DZA65_RS15540	0.32	-4.2
3,369,946	+		DZA65_RS15540	0.32	-0.9
3,369,946	+		DZA65_RS15540	0.32	-2.4
3,369,946	+		DZA65_RS15540	0.32	-1.7
3,369,946	+		DZA65_RS15540	0.32	-0.9
3,369,946	+		DZA65_RS15540	0.32	-2.0
3,369,946	+		DZA65_RS15540	0.32	-1.2
3,369,947	-		DZA65_RS15540	0.32	-1.6
3,369,947	-		DZA65_RS15540	0.32	-1.7
3,369,947	-		DZA65_RS15540	0.32	-3.7
3,369,947	-		DZA65_RS15540	0.32	-0.1
3,369,947	-		DZA65_RS15540	0.32	-3.1
3,370,039	+		DZA65_RS15540	0.42	+0.6
3,370,039	+		DZA65_RS15540	0.42	-0.1
3,370,039	+		DZA65_RS15540	0.42	-1.4
3,370,039	+		DZA65_RS15540	0.42	-1.2
3,370,039	+		DZA65_RS15540	0.42	+0.2
3,370,039	+		DZA65_RS15540	0.42	-0.6
3,370,040	-		DZA65_RS15540	0.42	-0.7
3,370,040	-		DZA65_RS15540	0.42	-0.3
3,370,040	-		DZA65_RS15540	0.42	+0.1
3,370,040	-		DZA65_RS15540	0.42	-1.8
3,370,040	-		DZA65_RS15540	0.42	-1.1
3,370,040	-		DZA65_RS15540	0.42	-1.9
3,370,089	+		DZA65_RS15540	0.47	-1.3
3,370,089	+		DZA65_RS15540	0.47	-0.7
3,370,114	+		DZA65_RS15540	0.49	-1.8
3,370,237	+		DZA65_RS15540	0.62	-0.5
3,370,238	-		DZA65_RS15540	0.62	-2.5
3,370,238	-		DZA65_RS15540	0.62	-0.4
3,370,238	-		DZA65_RS15540	0.62	+0.0
3,370,238	-		DZA65_RS15540	0.62	-0.7
3,370,240	+		DZA65_RS15540	0.62	+1.4
3,370,241	-		DZA65_RS15540	0.62	-0.8
3,370,344	+		DZA65_RS15540	0.72	+0.3
3,370,374	+		DZA65_RS15540	0.75	-2.0
3,370,375	-		DZA65_RS15540	0.75	-1.1
3,370,375	-		DZA65_RS15540	0.75	-1.7
3,370,536	+				-2.1
3,370,552	+				-1.4
3,370,552	+				-2.3
3,370,552	+				-1.9
3,370,553	-				+0.7
3,370,553	-				-0.1
3,370,555	+				-0.8
3,370,555	+				-1.9
3,370,555	+				-3.6
3,370,555	+				+2.5
3,370,555	+				-1.4
3,370,556	-				+0.6
3,370,620	+				+0.4
3,370,621	-				-1.3
3,370,665	+				-0.1
3,370,665	+				-1.2
3,370,666	-				+0.2
3,370,666	-				-1.0
3,370,666	-				-0.8
3,370,787	+		DZA65_RS15545	0.11	-1.4
3,370,788	-		DZA65_RS15545	0.11	-0.1
3,370,788	-		DZA65_RS15545	0.11	-1.7
3,370,877	+		DZA65_RS15545	0.18	-4.3
3,370,877	+		DZA65_RS15545	0.18	-1.6
3,370,877	+		DZA65_RS15545	0.18	-0.7
3,370,877	+		DZA65_RS15545	0.18	-2.6
3,370,877	+		DZA65_RS15545	0.18	+0.0
3,370,877	+		DZA65_RS15545	0.18	-1.1
3,370,878	-		DZA65_RS15545	0.18	-1.0
3,370,878	-		DZA65_RS15545	0.18	-1.9
3,370,878	-		DZA65_RS15545	0.18	-1.8
3,370,878	-		DZA65_RS15545	0.18	-0.1
3,370,878	-		DZA65_RS15545	0.18	-1.2
3,370,878	-		DZA65_RS15545	0.18	-1.4
3,370,957	+		DZA65_RS15545	0.24	-1.4
3,370,957	+		DZA65_RS15545	0.24	+0.2
3,370,957	+		DZA65_RS15545	0.24	-3.2
3,370,957	+		DZA65_RS15545	0.24	-0.9
3,370,958	-		DZA65_RS15545	0.24	-1.5
3,370,963	+		DZA65_RS15545	0.24	-1.4
3,371,134	+		DZA65_RS15545	0.38	-1.8
3,371,134	+		DZA65_RS15545	0.38	-0.3
3,371,134	+		DZA65_RS15545	0.38	-1.9
3,371,134	+		DZA65_RS15545	0.38	-1.4
3,371,134	+		DZA65_RS15545	0.38	-1.4
3,371,135	-		DZA65_RS15545	0.38	-1.7
3,371,135	-				+0.9
3,371,135	-		DZA65_RS15545	0.38	-0.9
3,371,135	-		DZA65_RS15545	0.38	-0.1
3,371,168	-		DZA65_RS15545	0.40	-1.4
3,371,420	+		DZA65_RS15545	0.60	-1.4
3,371,420	+		DZA65_RS15545	0.60	-0.1
3,371,420	+		DZA65_RS15545	0.60	-0.7
3,371,420	+		DZA65_RS15545	0.60	-1.4
3,371,420	+		DZA65_RS15545	0.60	-0.9
3,371,420	+		DZA65_RS15545	0.60	-1.2
3,371,420	+		DZA65_RS15545	0.60	-0.3
3,371,421	-		DZA65_RS15545	0.60	-2.1
3,371,587	+		DZA65_RS15545	0.73	-0.1
3,371,587	+		DZA65_RS15545	0.73	-1.4
3,371,587	+		DZA65_RS15545	0.73	-1.3
3,371,587	+		DZA65_RS15545	0.73	-1.7
3,371,587	+		DZA65_RS15545	0.73	+0.2
3,371,588	-		DZA65_RS15545	0.73	+0.2
3,371,588	-		DZA65_RS15545	0.73	-0.9
3,371,588	-		DZA65_RS15545	0.73	-0.5
3,371,588	-		DZA65_RS15545	0.73	-2.7
3,371,588	-		DZA65_RS15545	0.73	-1.3
3,371,588	-		DZA65_RS15545	0.73	-1.4
3,371,588	-		DZA65_RS15545	0.73	-0.4
3,371,825	+				-1.0
3,371,825	+				-2.5
3,371,826	-				-1.4
3,371,826	-				-0.1
3,371,826	-				-1.2
3,371,826	-				-1.3
3,371,921	+				-1.9
3,371,922	-				-1.1
3,371,922	-				-1.9
3,371,922	-				-1.0
3,371,952	+				+0.1
3,371,961	+				-0.7
3,371,961	+				-0.7
3,371,961	+				-0.8
3,371,962	-				+1.6
3,371,962	-				+0.5
3,371,962	-				-1.4
3,371,962	-				-0.7
3,371,969	-				+0.6
3,372,003	-				-0.8
3,372,003	-				-0.3
3,372,003	-				-0.2
3,372,003	-				+0.2
3,372,044	+				-0.0
3,372,045	-				+0.3
3,372,045	-				+0.3
3,372,057	+				-0.1
3,372,058	-				-0.3
3,372,074	-				-0.4
3,372,105	+				-0.5
3,372,105	+				-3.1
3,372,105	+				-0.3
3,372,106	-				+0.5
3,372,106	-				-0.9
3,372,106	-				-0.1
3,372,164	+				+0.1
3,372,164	+				+0.6
3,372,164	+				+0.2
3,372,164	+				-0.4
3,372,165	-				-0.1
3,372,169	+				+0.3
3,372,169	+				-0.5
3,372,169	+				+0.3
3,372,169	+				-0.4
3,372,169	+				-0.6
3,372,170	-				+0.5
3,372,179	-				-0.6
3,372,179	-				-1.6
3,372,179	-				-0.1
3,372,324	+		DZA65_RS15550	0.11	-0.3
3,372,325	-		DZA65_RS15550	0.11	-1.7
3,372,325	-		DZA65_RS15550	0.11	-2.1
3,372,325	-		DZA65_RS15550	0.11	-0.8
3,372,325	-		DZA65_RS15550	0.11	-0.9
3,372,633	+		DZA65_RS15550	0.40	-0.7
3,372,732	-		DZA65_RS15550	0.49	-0.9
3,372,802	-		DZA65_RS15550	0.55	-1.1
3,372,802	-		DZA65_RS15550	0.55	-1.2
3,372,831	-		DZA65_RS15550	0.58	-2.3