Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13355

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,859,198	+		DZA65_RS13345	0.60	-0.4
2,859,199	-		DZA65_RS13345	0.60	-2.0
2,859,234	+		DZA65_RS13345	0.64	+0.6
2,859,234	+		DZA65_RS13345	0.64	+1.3
2,859,234	+		DZA65_RS13345	0.64	-0.3
2,859,234	+		DZA65_RS13345	0.64	-0.1
2,859,235	-		DZA65_RS13345	0.64	+0.1
2,859,235	-		DZA65_RS13345	0.64	+1.3
2,859,235	-		DZA65_RS13345	0.64	-0.8
2,859,235	-		DZA65_RS13345	0.64	-0.3
2,859,235	-		DZA65_RS13345	0.64	-0.4
2,859,235	-		DZA65_RS13345	0.64	-1.9
2,859,452	+				-0.6
2,859,458	+				-0.4
2,859,458	+				+0.2
2,859,459	-				-0.6
2,859,459	-				+0.6
2,859,462	+				-0.5
2,859,463	-				-0.1
2,859,463	-				+0.2
2,859,463	-				-0.4
2,859,491	+				+0.7
2,859,518	+				+0.1
2,859,518	+				+0.4
2,859,518	+				+0.3
2,859,518	+				-0.6
2,859,518	+				-0.4
2,859,518	+				-0.4
2,859,518	+				-0.3
2,859,518	+				-0.5
2,859,518	+				+0.1
2,859,518	+				-1.9
2,859,519	-				-1.0
2,859,519	-				-0.5
2,859,519	-				+0.2
2,859,522	+				+0.6
2,859,522	+				-0.9
2,859,522	+				-0.7
2,859,522	+				+1.5
2,859,522	+				-0.3
2,859,522	+				-0.5
2,859,523	-				-1.3
2,859,523	-				-0.1
2,859,523	-				+0.1
2,859,523	-				-1.6
2,859,525	+				+1.0
2,859,525	+				-0.7
2,859,525	+				-0.7
2,859,525	+				-1.3
2,859,526	-				-0.6
2,859,526	-				+0.0
2,859,526	-				+0.5
2,859,534	+				-1.3
2,859,534	+				-1.1
2,859,534	+				-0.1
2,859,534	+				-0.4
2,859,534	+				+0.2
2,859,535	-				-1.2
2,859,535	-				-0.7
2,859,535	-				+0.1
2,859,535	-				+0.5
2,859,535	-				-1.7
2,859,538	+				+0.5
2,859,538	+				+0.7
2,859,538	+				-1.0
2,859,538	+				+0.1
2,859,538	+				-0.5
2,859,538	+				-1.0
2,859,538	+				-0.3
2,859,538	+				+0.5
2,859,539	-				+0.5
2,859,539	-				-0.7
2,859,539	-				-0.6
2,859,539	-				-0.4
2,859,539	-				-0.9
2,859,539	-				-2.5
2,859,539	-				-0.3
2,859,539	-				+0.7
2,859,539	-				-0.2
2,859,541	+				+0.2
2,859,542	-				+0.7
2,859,542	-				-0.2
2,859,542	-				-0.4
2,859,542	-				+0.2
2,859,671	-		DZA65_RS13350	0.32	-0.7
2,859,853	-				-1.6
2,859,907	+				+0.5
2,859,907	+				-0.2
2,859,960	+				-0.5
2,859,960	+				-0.4
2,859,961	-				-0.0
2,860,026	+				-0.9
2,860,026	+				-0.3
2,860,026	+				+1.3
2,860,026	+				-0.1
2,860,027	-				-0.4
2,860,033	+				+0.9
2,860,033	+				+0.7
2,860,034	-				-0.7
2,860,034	-				-0.4
2,860,034	-				+0.4
2,860,034	-				+0.6
2,860,034	-				-0.8
2,860,034	-				-0.5
2,860,035	+				-0.3
2,860,035	+				+0.1
2,860,035	+				-1.3
2,860,035	+				-0.6
2,860,036	-				-0.6
2,860,048	-				-0.4
2,860,054	-				+0.0
2,860,055	+				-0.2
2,860,055	+				-0.3
2,860,055	+				+1.9
2,860,055	+				-0.3
2,860,055	+				+0.1
2,860,055	+				+0.6
2,860,056	-				-1.0
2,860,171	-		DZA65_RS13355	0.15	+0.7
2,860,198	+		DZA65_RS13355	0.20	+0.6
2,860,225	+		DZA65_RS13355	0.24	+0.2
2,860,226	-		DZA65_RS13355	0.24	+0.3
2,860,443	+		DZA65_RS13355	0.63	+1.4
2,860,443	+		DZA65_RS13355	0.63	-0.1
2,860,443	+		DZA65_RS13355	0.63	-0.5
2,860,444	-		DZA65_RS13355	0.63	+0.5
2,860,444	-		DZA65_RS13355	0.63	+0.4
2,860,449	-		DZA65_RS13355	0.64	+1.6
2,860,581	+		DZA65_RS13355	0.87	+0.2
2,860,581	+		DZA65_RS13355	0.87	+1.6
2,860,582	-		DZA65_RS13355	0.88	-0.1
2,860,584	+		DZA65_RS13355	0.88	-1.6
2,860,584	+		DZA65_RS13355	0.88	+0.7
2,860,584	+		DZA65_RS13355	0.88	+0.2
2,860,584	+		DZA65_RS13355	0.88	+0.3
2,860,584	+		DZA65_RS13355	0.88	+1.4
2,860,584	+		DZA65_RS13355	0.88	-1.1
2,860,584	+		DZA65_RS13355	0.88	-1.5
2,860,584	+		DZA65_RS13355	0.88	+0.5
2,860,584	+		DZA65_RS13355	0.88	+0.0
2,860,584	+		DZA65_RS13355	0.88	-0.1
2,860,584	+		DZA65_RS13355	0.88	+0.0
2,860,585	-		DZA65_RS13355	0.88	-1.2
2,860,585	-		DZA65_RS13355	0.88	-0.3
2,860,585	-		DZA65_RS13355	0.88	+0.7
2,860,585	-		DZA65_RS13355	0.88	+0.9
2,860,585	-		DZA65_RS13355	0.88	+2.2
2,860,585	-		DZA65_RS13355	0.88	+1.0
2,860,585	-		DZA65_RS13355	0.88	+0.4
2,860,585	-		DZA65_RS13355	0.88	-0.1
2,860,603	+				-1.2
2,860,604	-				-2.1
2,860,604	-				+1.3
2,860,616	+				-0.6
2,860,616	+				-0.5
2,860,619	+				-0.1
2,860,619	+				-0.8
2,860,619	+				-0.3
2,860,728	+				-1.6
2,860,729	-				-0.1
2,860,796	+				+0.4
2,860,796	+				-0.1
2,860,796	+				-0.4
2,860,797	-				-0.3
2,860,797	-				-0.1
2,860,797	-				+0.3
2,860,851	+		DZA65_RS13360	0.12	-0.6
2,860,851	+		DZA65_RS13360	0.12	-0.6
2,860,860	+		DZA65_RS13360	0.13	-0.5
2,860,902	+		DZA65_RS13360	0.16	-0.1
2,860,902	+		DZA65_RS13360	0.16	+0.1
2,860,902	+		DZA65_RS13360	0.16	-0.4
2,860,902	+		DZA65_RS13360	0.16	-0.5
2,860,902	+		DZA65_RS13360	0.16	-0.6
2,860,903	-		DZA65_RS13360	0.16	-0.1
2,860,903	-		DZA65_RS13360	0.16	-0.2
2,860,903	-		DZA65_RS13360	0.16	-1.3
2,861,002	-		DZA65_RS13360	0.22	-0.9
2,861,002	-		DZA65_RS13360	0.22	-1.7
2,861,144	+		DZA65_RS13360	0.31	+0.7
2,861,144	+		DZA65_RS13360	0.31	-0.8
2,861,144	+		DZA65_RS13360	0.31	+0.4
2,861,144	+		DZA65_RS13360	0.31	-1.0
2,861,144	+		DZA65_RS13360	0.31	-0.2
2,861,144	+		DZA65_RS13360	0.31	-1.1
2,861,144	+		DZA65_RS13360	0.31	-0.1
2,861,144	+		DZA65_RS13360	0.31	-0.6
2,861,145	-		DZA65_RS13360	0.31	-0.1
2,861,145	-		DZA65_RS13360	0.31	-0.5
2,861,145	-		DZA65_RS13360	0.31	+1.1
2,861,145	-		DZA65_RS13360	0.31	+0.3
2,861,145	-		DZA65_RS13360	0.31	+0.5
2,861,145	-		DZA65_RS13360	0.31	+1.1
2,861,145	-		DZA65_RS13360	0.31	+0.2
2,861,145	-		DZA65_RS13360	0.31	-0.1
2,861,275	+		DZA65_RS13360	0.39	+0.1
2,861,275	+		DZA65_RS13360	0.39	-0.3
2,861,276	-		DZA65_RS13360	0.39	-2.1
2,861,322	+		DZA65_RS13360	0.41	+0.3
2,861,322	+		DZA65_RS13360	0.41	+0.9
2,861,323	-		DZA65_RS13360	0.42	+0.2
2,861,323	-		DZA65_RS13360	0.42	-1.1
2,861,323	-		DZA65_RS13360	0.42	+2.1
2,861,323	-		DZA65_RS13360	0.42	-2.7
2,861,323	-		DZA65_RS13360	0.42	-0.9
2,861,323	-		DZA65_RS13360	0.42	+0.5
2,861,429	+				+0.7
2,861,429	+		DZA65_RS13360	0.48	+0.1
2,861,429	+		DZA65_RS13360	0.48	+0.0
2,861,429	+		DZA65_RS13360	0.48	+0.0
2,861,429	+		DZA65_RS13360	0.48	-0.5
2,861,430	-		DZA65_RS13360	0.48	+1.1
2,861,430	-		DZA65_RS13360	0.48	-0.0
2,861,430	-		DZA65_RS13360	0.48	+0.2
2,861,438	+		DZA65_RS13360	0.49	-0.2
2,861,446	-		DZA65_RS13360	0.49	+0.6
2,861,447	+		DZA65_RS13360	0.49	-0.7
2,861,448	-		DZA65_RS13360	0.49	+0.1
2,861,448	-		DZA65_RS13360	0.49	-0.1
2,861,560	+		DZA65_RS13360	0.56	-1.9
2,861,560	+		DZA65_RS13360	0.56	-0.3
2,861,561	-		DZA65_RS13360	0.56	+0.4