Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12910

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,766,212	+				-0.1
2,766,223	+				-0.5
2,766,255	+				+0.7
2,766,258	+				-0.4
2,766,258	+				+0.7
2,766,259	-				-0.4
2,766,259	-				+0.0
2,766,262	+				+1.4
2,766,262	+				-0.0
2,766,262	+				-1.6
2,766,262	+				-0.2
2,766,263	-				-0.3
2,766,263	-				+0.7
2,766,264	+				+0.7
2,766,265	-				-1.5
2,766,265	-				+0.1
2,766,265	-				-0.5
2,766,265	-				+0.4
2,766,265	-				-2.2
2,766,265	-				+0.1
2,766,265	-				+0.1
2,766,277	+				+0.2
2,766,278	-				+0.1
2,766,308	+				-0.4
2,766,309	-				+0.7
2,766,309	-				+0.2
2,766,309	-				+1.2
2,766,309	-				+0.8
2,766,311	+				-1.0
2,766,316	+				-2.4
2,766,332	-				-2.7
2,766,804	-				+0.0
2,766,825	-				+1.1
2,766,825	-				+1.0
2,766,837	-				-2.4
2,766,850	-				+0.5
2,766,871	-				-1.2
2,766,883	-				-0.8
2,766,922	+				+0.2
2,766,922	+				+0.6
2,766,922	+				+0.5
2,766,923	-				-0.5
2,766,923	-				+1.3
2,766,944	-				-0.7
2,766,950	-				+0.6
2,766,989	+				-0.3
2,766,989	+				+0.5
2,766,989	+				-1.3
2,766,991	+				+0.0
2,766,991	+				+0.8
2,766,991	+				-1.9
2,766,991	+				-0.3
2,766,991	+				-0.3
2,766,991	+				-0.2
2,766,992	-				+0.1
2,766,992	-				-0.8
2,766,996	-				-0.9
2,767,010	+				-0.2
2,767,026	-				+0.2
2,767,035	-				+0.5
2,767,035	-				-0.2
2,767,035	-				-1.9
2,767,035	-				+0.0
2,767,039	+				+1.3
2,767,040	-				-0.1
2,767,040	-				-0.6
2,767,040	-				-0.3
2,767,044	+				-0.1
2,767,044	+				-0.3
2,767,044	+				-0.5
2,767,045	-				+0.1
2,767,045	-				-0.9
2,767,045	-				+0.7
2,767,045	-				-0.5
2,767,045	-				+0.3
2,767,045	-				+0.9
2,767,046	+				-0.1
2,767,046	+				+0.3
2,767,046	+				+0.4
2,767,046	+				-0.9
2,767,046	+				-0.7
2,767,046	+				-0.5
2,767,046	+				-0.3
2,767,046	+				-1.0
2,767,047	-				-1.9
2,767,047	-				+0.9
2,767,047	-				+0.5
2,767,047	-				-0.5
2,767,047	-				+0.1
2,767,047	-				+0.1
2,767,047	-				-0.1
2,767,052	+				+0.2
2,767,053	-				-0.1
2,767,053	-				+0.3
2,767,053	-				-0.3
2,767,055	+				+0.7
2,767,055	+				-0.8
2,767,055	+				-0.7
2,767,055	+				-0.6
2,767,055	+				-0.3
2,767,055	+				+0.0
2,767,055	+				+1.1
2,767,056	-				+0.2
2,767,082	+				-0.7
2,767,082	+				+0.6
2,767,082	+				+0.4
2,767,082	+				-1.0
2,767,082	+				+0.1
2,767,082	+				+1.3
2,767,083	-				-1.1
2,767,093	+				-0.6
2,767,093	+				-0.4
2,767,093	+				-0.2
2,767,093	+				+0.1
2,767,094	-				+0.1
2,767,094	-				+0.6
2,767,094	-				-0.2
2,767,094	-				-0.5
2,767,094	-				+0.3
2,767,094	-				-2.1
2,767,094	-				+1.0
2,767,094	-				-0.1
2,767,200	-				-1.4
2,767,213	-				-1.3
2,767,213	-				+0.7
2,767,271	+				-0.3
2,767,321	-		DZA65_RS12910	0.10	-0.3
2,767,436	+		DZA65_RS12910	0.18	-0.5
2,767,437	-		DZA65_RS12910	0.18	+0.7
2,767,478	+		DZA65_RS12910	0.20	+0.2
2,767,525	+		DZA65_RS12910	0.23	+0.9
2,767,525	+		DZA65_RS12910	0.23	-1.3
2,767,525	+		DZA65_RS12910	0.23	-0.3
2,767,526	-		DZA65_RS12910	0.23	-0.9
2,767,526	-		DZA65_RS12910	0.23	-0.5
2,767,526	-		DZA65_RS12910	0.23	-0.0
2,767,526	-		DZA65_RS12910	0.23	-0.6
2,767,634	+		DZA65_RS12910	0.30	-1.3
2,767,637	+		DZA65_RS12910	0.31	-0.3
2,767,638	-		DZA65_RS12910	0.31	+0.2
2,767,720	+		DZA65_RS12910	0.36	-0.9
2,767,720	+		DZA65_RS12910	0.36	-1.9
2,767,720	+		DZA65_RS12910	0.36	-0.5
2,767,720	+		DZA65_RS12910	0.36	-0.4
2,767,720	+		DZA65_RS12910	0.36	-1.3
2,767,720	+		DZA65_RS12910	0.36	+0.2
2,767,720	+		DZA65_RS12910	0.36	-1.1
2,767,720	+		DZA65_RS12910	0.36	-1.2
2,767,720	+		DZA65_RS12910	0.36	-0.7
2,767,720	+		DZA65_RS12910	0.36	-2.0
2,767,721	-		DZA65_RS12910	0.36	-0.5
2,767,721	-		DZA65_RS12910	0.36	-0.4
2,767,721	-		DZA65_RS12910	0.36	-0.1
2,767,721	-		DZA65_RS12910	0.36	+0.0
2,767,721	-		DZA65_RS12910	0.36	+0.1
2,767,721	-		DZA65_RS12910	0.36	-1.3
2,767,721	-		DZA65_RS12910	0.36	-1.9
2,767,721	-		DZA65_RS12910	0.36	-1.7
2,767,881	-		DZA65_RS12910	0.46	+1.1
2,767,902	-		DZA65_RS12910	0.47	-0.3
2,768,112	+		DZA65_RS12910	0.61	-0.3
2,768,112	+		DZA65_RS12910	0.61	-0.3
2,768,112	+		DZA65_RS12910	0.61	-1.6
2,768,113	-		DZA65_RS12910	0.61	-1.0
2,768,113	-		DZA65_RS12910	0.61	-1.3
2,768,113	-		DZA65_RS12910	0.61	-0.3
2,768,113	-		DZA65_RS12910	0.61	-1.3
2,768,146	-		DZA65_RS12910	0.63	-1.9
2,768,508	+		DZA65_RS12910	0.86	-0.4
2,768,516	-		DZA65_RS12910	0.87	-0.2
2,768,595	+				-2.0
2,768,606	+				-1.1
2,768,650	-				-0.9
2,768,650	-				+1.3
2,768,711	-				-0.0
2,768,711	-				-1.1
2,768,728	+				+0.1
2,768,728	+				+0.4
2,768,728	+				+0.9
2,768,728	+				-0.3
2,768,729	-				-1.6
2,768,729	-				-0.3
2,768,729	-				-1.6
2,768,772	+				+0.2
2,768,772	+				+0.4
2,768,772	+				-1.0
2,768,772	+				-1.3
2,768,773	-				+0.1
2,768,773	-				-0.4
2,768,773	-				+1.4
2,768,773	-				-1.0
2,768,773	-				-1.9
2,768,843	+				-1.0
2,768,843	+				-1.7
2,768,844	-				-1.6
2,768,844	-				-0.4
2,768,844	-				-0.7
2,768,844	-				-0.1
2,768,910	+				+0.9
2,768,910	+				-0.7
2,768,912	+				-0.2
2,768,912	+				-0.3
2,768,912	+				+0.7
2,768,912	+				-1.1
2,768,912	+				+0.3
2,768,912	+				+0.8
2,768,912	+				-2.1
2,768,912	+				-3.6
2,768,912	+				+0.4
2,768,913	-				+1.9
2,768,913	-				+0.3
2,768,913	-				-0.3
2,768,913	-				+0.6
2,768,913	-				-0.3
2,768,913	-				-0.5
2,768,913	-				+1.3
2,768,916	+				-1.1
2,768,928	+				-0.1
2,768,928	+				+0.2
2,768,928	+				+0.2
2,768,929	-				+2.5
2,768,929	-				-0.2
2,769,120	+		DZA65_RS12915	0.18	+0.3
2,769,121	-		DZA65_RS12915	0.18	-0.2
2,769,186	+		DZA65_RS12915	0.22	+0.8
2,769,224	+		DZA65_RS12915	0.24	+0.1
2,769,224	+		DZA65_RS12915	0.24	-0.5
2,769,225	-		DZA65_RS12915	0.25	-0.5
2,769,225	-		DZA65_RS12915	0.25	-1.3
2,769,225	-		DZA65_RS12915	0.25	-0.3
2,769,225	-		DZA65_RS12915	0.25	-0.3
2,769,225	-				+2.0
2,769,225	-		DZA65_RS12915	0.25	+0.1
2,769,241	+		DZA65_RS12915	0.26	-0.2
2,769,241	+		DZA65_RS12915	0.26	+0.2
2,769,245	+		DZA65_RS12915	0.26	+0.1
2,769,245	+		DZA65_RS12915	0.26	+0.2
2,769,246	-		DZA65_RS12915	0.26	+0.0
2,769,246	-		DZA65_RS12915	0.26	+0.3
2,769,263	+		DZA65_RS12915	0.27	-0.1
2,769,263	+		DZA65_RS12915	0.27	+0.4
2,769,264	-		DZA65_RS12915	0.27	-0.1
2,769,269	+		DZA65_RS12915	0.27	-1.3
2,769,269	+		DZA65_RS12915	0.27	-0.0
2,769,269	+		DZA65_RS12915	0.27	+1.1
2,769,269	+		DZA65_RS12915	0.27	+0.9
2,769,270	-		DZA65_RS12915	0.27	-0.5
2,769,270	-		DZA65_RS12915	0.27	+0.3
2,769,270	-		DZA65_RS12915	0.27	-1.3
2,769,295	-		DZA65_RS12915	0.29	+0.8
2,769,295	-		DZA65_RS12915	0.29	-0.1
2,769,303	+		DZA65_RS12915	0.30	-0.8
2,769,303	+		DZA65_RS12915	0.30	+0.1
2,769,304	-		DZA65_RS12915	0.30	-1.5
2,769,306	+		DZA65_RS12915	0.30	+0.8
2,769,306	+		DZA65_RS12915	0.30	-0.9
2,769,307	-		DZA65_RS12915	0.30	+0.0
2,769,335	+		DZA65_RS12915	0.32	-0.4
2,769,335	+		DZA65_RS12915	0.32	+0.2
2,769,335	+		DZA65_RS12915	0.32	+0.5
2,769,336	-		DZA65_RS12915	0.32	+0.1
2,769,487	+		DZA65_RS12915	0.41	+0.5
2,769,487	+		DZA65_RS12915	0.41	-0.3
2,769,487	+		DZA65_RS12915	0.41	-0.1
2,769,487	+		DZA65_RS12915	0.41	+0.8
2,769,488	-		DZA65_RS12915	0.41	+1.1
2,769,488	-		DZA65_RS12915	0.41	+0.3
2,769,488	-		DZA65_RS12915	0.41	-0.7
2,769,527	+		DZA65_RS12915	0.44	+0.1
2,769,527	+		DZA65_RS12915	0.44	+0.3
2,769,527	+		DZA65_RS12915	0.44	+1.5
2,769,527	+		DZA65_RS12915	0.44	-0.7
2,769,528	-		DZA65_RS12915	0.44	+0.3
2,769,528	-		DZA65_RS12915	0.44	+1.0
2,769,528	-		DZA65_RS12915	0.44	+1.2
2,769,528	-		DZA65_RS12915	0.44	+0.5
2,769,708	+		DZA65_RS12915	0.56	-0.1
2,769,708	+		DZA65_RS12915	0.56	-0.9
2,769,708	+		DZA65_RS12915	0.56	+0.7
2,769,708	+		DZA65_RS12915	0.56	+0.9
2,769,709	-		DZA65_RS12915	0.56	-0.3
2,769,709	-		DZA65_RS12915	0.56	-0.0
2,769,711	+		DZA65_RS12915	0.56	+0.3
2,769,711	+		DZA65_RS12915	0.56	-0.2
2,769,711	+		DZA65_RS12915	0.56	+1.4
2,769,712	-		DZA65_RS12915	0.56	+0.6
2,769,712	-		DZA65_RS12915	0.56	+0.6
2,769,712	-		DZA65_RS12915	0.56	-0.8
2,769,712	-		DZA65_RS12915	0.56	+0.5