Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10420

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,203,161	-		DZA65_RS10415	0.81	-0.2
2,203,272	+		DZA65_RS10415	0.84	-0.3
2,203,336	+		DZA65_RS10415	0.86	+0.9
2,203,336	+		DZA65_RS10415	0.86	-0.5
2,203,344	+		DZA65_RS10415	0.86	-1.8
2,203,344	+		DZA65_RS10415	0.86	-0.1
2,203,345	-		DZA65_RS10415	0.86	+0.3
2,203,345	-		DZA65_RS10415	0.86	-0.1
2,203,388	+		DZA65_RS10415	0.87	-0.7
2,203,388	+		DZA65_RS10415	0.87	+0.2
2,203,388	+		DZA65_RS10415	0.87	-0.9
2,203,388	+		DZA65_RS10415	0.87	-1.3
2,203,389	-		DZA65_RS10415	0.87	-0.6
2,203,389	-		DZA65_RS10415	0.87	+0.3
2,203,389	-		DZA65_RS10415	0.87	-0.3
2,203,600	+				+0.7
2,203,600	+				+0.1
2,203,658	-				+0.2
2,203,756	+				+0.4
2,203,756	+				+0.0
2,203,756	+				-1.6
2,203,757	-				-0.2
2,203,757	-				-1.1
2,203,933	-				-0.2
2,204,005	+				-0.2
2,204,006	-				-0.1
2,204,011	+				-0.6
2,204,011	+				+0.0
2,204,011	+				-0.2
2,204,011	+				-1.9
2,204,011	+				+0.9
2,204,011	+				+0.3
2,204,011	+				+1.0
2,204,011	+				-0.0
2,204,012	-				+1.0
2,204,012	-				-0.3
2,204,012	-				-1.3
2,204,012	-				+0.7
2,204,012	-				+0.4
2,204,012	-				+0.7
2,204,045	+				-1.0
2,204,045	+				-2.3
2,204,045	+				+0.6
2,204,045	+				-0.3
2,204,045	+				-0.2
2,204,045	+				-0.9
2,204,046	-				-0.1
2,204,046	-				+0.9
2,204,046	-				-0.0
2,204,046	-				-0.2
2,204,046	-				+0.2
2,204,046	-				-1.9
2,204,046	-				-0.8
2,204,047	+				+0.3
2,204,047	+				-0.7
2,204,090	+				-0.2
2,204,090	+				+0.0
2,204,090	+				+0.0
2,204,090	+				-1.9
2,204,090	+				-0.2
2,204,090	+				-1.2
2,204,090	+				-0.3
2,204,091	-				-0.7
2,204,091	-				+0.2
2,204,091	-				+1.0
2,204,091	-				-0.5
2,204,091	-				+0.7
2,204,091	-				-0.6
2,204,111	+				+0.0
2,204,111	+				+0.4
2,204,169	-				+0.5
2,204,169	-				+0.2
2,204,276	+		DZA65_RS10420	0.14	-0.6
2,204,276	+		DZA65_RS10420	0.14	-0.5
2,204,276	+		DZA65_RS10420	0.14	-0.1
2,204,276	+		DZA65_RS10420	0.14	+0.2
2,204,276	+		DZA65_RS10420	0.14	-0.7
2,204,318	+		DZA65_RS10420	0.15	+0.1
2,204,318	+		DZA65_RS10420	0.15	-0.9
2,204,319	-		DZA65_RS10420	0.15	-0.0
2,204,319	-		DZA65_RS10420	0.15	-0.6
2,204,319	-		DZA65_RS10420	0.15	+1.9
2,204,319	-		DZA65_RS10420	0.15	+0.5
2,204,392	-		DZA65_RS10420	0.18	+0.2
2,204,429	+		DZA65_RS10420	0.19	+0.7
2,204,429	+		DZA65_RS10420	0.19	-0.9
2,204,429	+		DZA65_RS10420	0.19	+0.5
2,204,473	+		DZA65_RS10420	0.20	-0.0
2,204,519	+		DZA65_RS10420	0.22	+0.4
2,204,549	+		DZA65_RS10420	0.23	-0.5
2,204,549	+		DZA65_RS10420	0.23	-0.1
2,204,550	-		DZA65_RS10420	0.23	-0.0
2,204,686	+		DZA65_RS10420	0.28	+0.2
2,204,687	-		DZA65_RS10420	0.28	-0.4
2,204,687	-		DZA65_RS10420	0.28	+0.7
2,204,687	-		DZA65_RS10420	0.28	-0.9
2,204,687	-		DZA65_RS10420	0.28	-1.5
2,204,835	+				+0.1
2,204,844	+		DZA65_RS10420	0.33	-1.5
2,204,844	+		DZA65_RS10420	0.33	+0.7
2,204,844	+		DZA65_RS10420	0.33	-0.6
2,204,844	+		DZA65_RS10420	0.33	+0.8
2,204,844	+		DZA65_RS10420	0.33	+0.2
2,204,845	-		DZA65_RS10420	0.33	+0.5
2,204,845	-		DZA65_RS10420	0.33	+0.4
2,204,845	-		DZA65_RS10420	0.33	+0.5
2,204,845	-		DZA65_RS10420	0.33	-0.2
2,204,845	-		DZA65_RS10420	0.33	+0.0
2,204,845	-		DZA65_RS10420	0.33	-0.0
2,204,845	-		DZA65_RS10420	0.33	+0.7
2,204,845	-		DZA65_RS10420	0.33	+0.4
2,204,850	+		DZA65_RS10420	0.33	-0.3
2,204,851	-		DZA65_RS10420	0.33	+0.8
2,204,880	+		DZA65_RS10420	0.34	+1.2
2,204,895	+		DZA65_RS10420	0.35	-0.7
2,204,945	-		DZA65_RS10420	0.37	+0.0
2,204,947	+		DZA65_RS10420	0.37	+0.5
2,204,947	+		DZA65_RS10420	0.37	+0.2
2,204,947	+		DZA65_RS10420	0.37	-0.3
2,204,947	+		DZA65_RS10420	0.37	-1.0
2,204,948	-		DZA65_RS10420	0.37	+1.9
2,205,051	-		DZA65_RS10420	0.40	-1.3
2,205,051	-		DZA65_RS10420	0.40	+0.0
2,205,053	+		DZA65_RS10420	0.40	-0.5
2,205,053	+		DZA65_RS10420	0.40	+0.7
2,205,053	+		DZA65_RS10420	0.40	+0.2
2,205,054	-		DZA65_RS10420	0.40	+1.0
2,205,054	-		DZA65_RS10420	0.40	-0.0
2,205,054	-		DZA65_RS10420	0.40	+0.7
2,205,054	-		DZA65_RS10420	0.40	+0.4
2,205,054	-		DZA65_RS10420	0.40	-0.1
2,205,054	-		DZA65_RS10420	0.40	-0.1
2,205,058	+		DZA65_RS10420	0.40	+0.7
2,205,079	+		DZA65_RS10420	0.41	+0.7
2,205,079	+		DZA65_RS10420	0.41	-0.3
2,205,080	-		DZA65_RS10420	0.41	+1.1
2,205,083	+		DZA65_RS10420	0.41	+0.5
2,205,084	-		DZA65_RS10420	0.41	+0.5
2,205,084	-		DZA65_RS10420	0.41	+0.1
2,205,084	-		DZA65_RS10420	0.41	-0.5
2,205,084	-		DZA65_RS10420	0.41	+0.6
2,205,084	-		DZA65_RS10420	0.41	-0.8
2,205,116	-		DZA65_RS10420	0.42	+0.6
2,205,159	-		DZA65_RS10420	0.44	-0.2
2,205,159	-		DZA65_RS10420	0.44	-0.6
2,205,353	+		DZA65_RS10420	0.51	-0.3
2,205,353	+		DZA65_RS10420	0.51	-0.1
2,205,369	+		DZA65_RS10420	0.51	-0.1
2,205,369	+		DZA65_RS10420	0.51	-0.5
2,205,369	+		DZA65_RS10420	0.51	+0.0
2,205,369	+		DZA65_RS10420	0.51	+0.7
2,205,370	-		DZA65_RS10420	0.51	-0.1
2,205,370	-		DZA65_RS10420	0.51	-0.0
2,205,370	-		DZA65_RS10420	0.51	-1.0
2,205,370	-		DZA65_RS10420	0.51	+0.2
2,205,488	+		DZA65_RS10420	0.55	-0.3
2,205,489	-		DZA65_RS10420	0.55	+1.4
2,205,596	+		DZA65_RS10420	0.59	-1.9
2,205,596	+		DZA65_RS10420	0.59	-1.3
2,205,597	-		DZA65_RS10420	0.59	-0.2
2,205,597	-		DZA65_RS10420	0.59	-0.5
2,205,649	+		DZA65_RS10420	0.61	+0.6
2,205,650	-		DZA65_RS10420	0.61	+0.2
2,205,682	-		DZA65_RS10420	0.62	+0.4
2,205,696	-		DZA65_RS10420	0.62	+0.6
2,205,696	-		DZA65_RS10420	0.62	+0.5
2,205,776	+		DZA65_RS10420	0.65	-0.5
2,205,832	-		DZA65_RS10420	0.67	+0.9
2,205,833	+		DZA65_RS10420	0.67	-1.4
2,205,833	+		DZA65_RS10420	0.67	+1.2
2,205,982	+		DZA65_RS10420	0.72	-0.1
2,205,983	-		DZA65_RS10420	0.72	-0.2
2,206,011	+		DZA65_RS10420	0.73	-1.2
2,206,080	-		DZA65_RS10420	0.75	+1.1
2,206,096	-		DZA65_RS10420	0.76	-0.5
2,206,096	-		DZA65_RS10420	0.76	-0.8
2,206,111	+		DZA65_RS10420	0.76	+0.1
2,206,111	+		DZA65_RS10420	0.76	-0.1
2,206,111	+		DZA65_RS10420	0.76	-0.6
2,206,112	-		DZA65_RS10420	0.76	+1.1
2,206,112	-		DZA65_RS10420	0.76	-0.1
2,206,138	+		DZA65_RS10420	0.77	+0.3
2,206,138	+		DZA65_RS10420	0.77	-0.5
2,206,139	-		DZA65_RS10420	0.77	+0.4
2,206,223	+		DZA65_RS10420	0.80	+0.1
2,206,223	+		DZA65_RS10420	0.80	+0.4
2,206,223	+		DZA65_RS10420	0.80	+0.3
2,206,223	+		DZA65_RS10420	0.80	+1.9
2,206,223	+		DZA65_RS10420	0.80	-0.1
2,206,223	+		DZA65_RS10420	0.80	-0.2
2,206,223	+		DZA65_RS10420	0.80	+1.0
2,206,223	+		DZA65_RS10420	0.80	+2.0
2,206,223	+		DZA65_RS10420	0.80	-0.0
2,206,223	+		DZA65_RS10420	0.80	-0.6
2,206,223	+		DZA65_RS10420	0.80	+0.2
2,206,223	+		DZA65_RS10420	0.80	+0.8
2,206,223	+		DZA65_RS10420	0.80	-1.4
2,206,223	+		DZA65_RS10420	0.80	-0.5
2,206,223	+		DZA65_RS10420	0.80	-1.6
2,206,223	+		DZA65_RS10420	0.80	+0.1
2,206,224	-		DZA65_RS10420	0.80	-0.5
2,206,224	-		DZA65_RS10420	0.80	-0.1
2,206,224	-		DZA65_RS10420	0.80	-0.6
2,206,224	-		DZA65_RS10420	0.80	-0.8
2,206,224	-		DZA65_RS10420	0.80	-0.5
2,206,224	-		DZA65_RS10420	0.80	+0.4
2,206,224	-		DZA65_RS10420	0.80	+0.4
2,206,224	-		DZA65_RS10420	0.80	+0.5
2,206,224	-		DZA65_RS10420	0.80	+0.4
2,206,224	-		DZA65_RS10420	0.80	-1.0
2,206,224	-		DZA65_RS10420	0.80	+0.8
2,206,224	-		DZA65_RS10420	0.80	-0.3
2,206,224	-		DZA65_RS10420	0.80	-0.9
2,206,224	-				+2.3
2,206,224	-		DZA65_RS10420	0.80	+0.4
2,206,224	-		DZA65_RS10420	0.80	-0.6
2,206,227	+		DZA65_RS10420	0.80	+0.3
2,206,227	+		DZA65_RS10420	0.80	-0.7
2,206,228	-				-0.3
2,206,228	-		DZA65_RS10420	0.80	-1.4
2,206,228	-		DZA65_RS10420	0.80	+0.3
2,206,228	-		DZA65_RS10420	0.80	+0.2
2,206,228	-		DZA65_RS10420	0.80	-0.5
2,206,264	-		DZA65_RS10420	0.82	-0.3
2,206,264	-		DZA65_RS10420	0.82	-0.0
2,206,264	-		DZA65_RS10420	0.82	-0.6
2,206,326	+		DZA65_RS10420	0.84	+0.7
2,206,326	+		DZA65_RS10420	0.84	+0.5
2,206,326	+		DZA65_RS10420	0.84	-2.8
2,206,326	+		DZA65_RS10420	0.84	-0.5
2,206,326	+		DZA65_RS10420	0.84	-0.2
2,206,326	+		DZA65_RS10420	0.84	+0.2
2,206,326	+		DZA65_RS10420	0.84	-1.8
2,206,327	-		DZA65_RS10420	0.84	+0.2
2,206,327	-		DZA65_RS10420	0.84	+0.0
2,206,331	+		DZA65_RS10420	0.84	-0.3
2,206,370	+		DZA65_RS10420	0.85	-0.0
2,206,370	+		DZA65_RS10420	0.85	-2.9
2,206,370	+		DZA65_RS10420	0.85	+1.3
2,206,370	+		DZA65_RS10420	0.85	-0.6
2,206,370	+		DZA65_RS10420	0.85	-0.9
2,206,370	+		DZA65_RS10420	0.85	-0.6
2,206,370	+		DZA65_RS10420	0.85	-0.3
2,206,370	+		DZA65_RS10420	0.85	-0.4
2,206,370	+		DZA65_RS10420	0.85	-1.1
2,206,370	+		DZA65_RS10420	0.85	+0.3
2,206,370	+		DZA65_RS10420	0.85	+0.1
2,206,371	-		DZA65_RS10420	0.85	+1.1
2,206,371	-		DZA65_RS10420	0.85	+0.2
2,206,371	-		DZA65_RS10420	0.85	+0.4
2,206,371	-		DZA65_RS10420	0.85	-0.2
2,206,371	-		DZA65_RS10420	0.85	+0.7
2,206,371	-		DZA65_RS10420	0.85	+1.5
2,206,371	-		DZA65_RS10420	0.85	+0.7
2,206,371	-		DZA65_RS10420	0.85	-1.3
2,206,371	-		DZA65_RS10420	0.85	-0.2
2,206,371	-		DZA65_RS10420	0.85	-1.6
2,206,371	-		DZA65_RS10420	0.85	-0.5
2,206,371	-		DZA65_RS10420	0.85	+0.2
2,206,371	-		DZA65_RS10420	0.85	-0.5
2,206,371	-		DZA65_RS10420	0.85	+1.5
2,206,429	+		DZA65_RS10420	0.87	+1.2
2,206,429	+		DZA65_RS10420	0.87	+0.7
2,206,429	+		DZA65_RS10420	0.87	-0.3
2,206,429	+		DZA65_RS10420	0.87	-0.6
2,206,429	+				+0.7
2,206,429	+		DZA65_RS10420	0.87	-0.2
2,206,429	+		DZA65_RS10420	0.87	-1.2
2,206,430	-		DZA65_RS10420	0.87	+0.9
2,206,430	-		DZA65_RS10420	0.87	-0.3
2,206,529	+				+0.3
2,206,529	+				+0.9
2,206,530	-				-1.1
2,206,530	-				+0.3
2,206,530	-				+0.6
2,206,530	-				+0.1
2,206,693	+				-0.2
2,206,763	-				-0.2
2,206,763	-				-1.3
2,206,794	+				+0.3
2,206,794	+				+1.0
2,206,794	+				+0.0
2,206,794	+				-0.5
2,206,794	+				-1.1
2,206,794	+				-0.5
2,206,794	+				-0.2
2,206,795	-				+0.7
2,206,795	-				+0.4
2,206,795	-				-0.3
2,206,795	-				+0.4
2,206,795	-				-0.5
2,206,795	-				-0.4
2,206,795	-				-0.3
2,206,795	-				-0.5
2,206,795	-				+2.6
2,206,795	-				-1.6
2,206,966	-				-0.2
2,207,308	-		DZA65_RS10425	0.15	-0.3
2,207,379	+		DZA65_RS10425	0.17	-0.6
2,207,379	+		DZA65_RS10425	0.17	+0.1
2,207,390	-		DZA65_RS10425	0.17	-0.1
2,207,390	-		DZA65_RS10425	0.17	-1.4
2,207,422	+		DZA65_RS10425	0.18	-1.6
2,207,422	+		DZA65_RS10425	0.18	-2.1
2,207,533	+		DZA65_RS10425	0.22	+0.6
2,207,597	+		DZA65_RS10425	0.23	-0.9
2,207,618	+		DZA65_RS10425	0.24	+0.1
2,207,618	+		DZA65_RS10425	0.24	+1.8