Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09025

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,898,849	+				-0.3
1,898,917	-		DZA65_RS09015	0.30	+0.1
1,899,104	+				+0.4
1,899,104	+				+0.5
1,899,104	+				-0.9
1,899,104	+				+1.5
1,899,105	-				-0.0
1,899,105	-				+0.4
1,899,144	+		DZA65_RS09020	0.11	-0.5
1,899,144	+		DZA65_RS09020	0.11	-0.4
1,899,145	-		DZA65_RS09020	0.12	+0.7
1,899,145	-		DZA65_RS09020	0.12	-2.1
1,899,145	-		DZA65_RS09020	0.12	-1.0
1,899,202	+		DZA65_RS09020	0.24	-0.6
1,899,260	+		DZA65_RS09020	0.37	+0.4
1,899,261	-				-0.3
1,899,261	-		DZA65_RS09020	0.37	-0.4
1,899,261	-		DZA65_RS09020	0.37	+0.9
1,899,325	+				+0.4
1,899,325	+		DZA65_RS09020	0.52	+0.5
1,899,326	-		DZA65_RS09020	0.52	-0.4
1,899,326	-		DZA65_RS09020	0.52	+0.1
1,899,438	+		DZA65_RS09020	0.77	-2.1
1,899,439	-		DZA65_RS09020	0.77	-0.6
1,899,541	-				-1.1
1,899,575	-				-0.3
1,899,578	+				-0.3
1,899,578	+				-0.6
1,899,634	-				+1.5
1,899,648	+				+0.7
1,899,648	+				-1.3
1,899,649	-				-1.7
1,899,649	-				-1.3
1,899,666	-				-0.8
1,899,666	-				-1.1
1,899,745	-				-1.2
1,899,745	-				-0.7
1,899,745	-				-2.1
1,899,752	+				-0.4
1,899,758	+				-0.6
1,899,759	-				-1.3
1,899,766	+				-1.6
1,899,766	+				+0.1
1,899,766	+				-0.5
1,899,781	-				-1.2
1,899,787	-				-0.6
1,899,787	-				-0.4
1,899,787	-				-0.5
1,899,798	+				-2.5
1,899,799	-				+0.0
1,899,799	-				-1.2
1,899,800	+				-0.7
1,899,800	+				-1.4
1,899,800	+				-0.3
1,899,800	+				-0.1
1,899,801	-				-0.7
1,899,801	-				-2.1
1,899,801	-				-1.6
1,899,801	-				-0.6
1,899,801	-				+0.4
1,899,801	-				-1.4
1,899,801	-				-1.1
1,899,801	-				-0.9
1,899,801	-				-0.6
1,899,801	-				-0.6
1,899,882	+				-0.7
1,899,882	+				-0.8
1,899,882	+				-2.0
1,899,882	+				-1.6
1,899,882	+				-1.0
1,899,883	-				-3.2
1,899,892	+		DZA65_RS09025	0.10	-1.5
1,899,892	+		DZA65_RS09025	0.10	-2.2
1,899,893	-		DZA65_RS09025	0.10	+0.5
1,899,939	+		DZA65_RS09025	0.15	-2.1
1,900,135	+				+0.7
1,900,305	+		DZA65_RS09025	0.51	+2.5
1,900,305	+		DZA65_RS09025	0.51	-0.8
1,900,305	+		DZA65_RS09025	0.51	-2.1
1,900,305	+		DZA65_RS09025	0.51	-1.7
1,900,306	-		DZA65_RS09025	0.51	-0.0
1,900,306	-		DZA65_RS09025	0.51	-0.5
1,900,306	-		DZA65_RS09025	0.51	-1.8
1,900,306	-		DZA65_RS09025	0.51	-2.2
1,900,387	+		DZA65_RS09025	0.59	-2.7
1,900,387	+		DZA65_RS09025	0.59	-2.6
1,900,387	+		DZA65_RS09025	0.59	-1.1
1,900,388	-		DZA65_RS09025	0.59	+0.1
1,900,388	-		DZA65_RS09025	0.59	-0.6
1,900,389	+		DZA65_RS09025	0.59	-0.5
1,900,390	-		DZA65_RS09025	0.59	-0.3
1,900,390	-		DZA65_RS09025	0.59	-1.0
1,900,450	+		DZA65_RS09025	0.65	-1.1
1,900,450	+		DZA65_RS09025	0.65	-0.0
1,900,451	-		DZA65_RS09025	0.65	-1.7
1,900,451	-		DZA65_RS09025	0.65	-1.6
1,900,451	-		DZA65_RS09025	0.65	-0.9
1,900,456	+		DZA65_RS09025	0.66	-1.1
1,900,456	+		DZA65_RS09025	0.66	-1.4
1,900,456	+		DZA65_RS09025	0.66	-0.9
1,900,457	-		DZA65_RS09025	0.66	-1.7
1,900,457	-		DZA65_RS09025	0.66	+0.4
1,900,457	-		DZA65_RS09025	0.66	-2.3
1,900,457	-		DZA65_RS09025	0.66	-0.3
1,900,457	-		DZA65_RS09025	0.66	-0.5
1,900,457	-		DZA65_RS09025	0.66	-0.8
1,900,457	-		DZA65_RS09025	0.66	-1.5
1,900,459	+		DZA65_RS09025	0.66	-3.0
1,900,460	-		DZA65_RS09025	0.66	-0.5
1,900,460	-		DZA65_RS09025	0.66	-1.2
1,900,504	-		DZA65_RS09025	0.71	-1.4
1,900,513	+		DZA65_RS09025	0.71	-0.6
1,900,513	+		DZA65_RS09025	0.71	-2.3
1,900,513	+		DZA65_RS09025	0.71	-1.2
1,900,513	+		DZA65_RS09025	0.71	-1.8
1,900,513	+		DZA65_RS09025	0.71	-0.9
1,900,514	-		DZA65_RS09025	0.71	-0.7
1,900,514	-		DZA65_RS09025	0.71	-0.7
1,900,514	-		DZA65_RS09025	0.71	-2.1
1,900,514	-		DZA65_RS09025	0.71	-1.2
1,900,514	-		DZA65_RS09025	0.71	-1.2
1,900,516	+		DZA65_RS09025	0.72	+0.7
1,900,516	+		DZA65_RS09025	0.72	+0.7
1,900,587	+		DZA65_RS09025	0.79	-0.7
1,900,587	+		DZA65_RS09025	0.79	-0.2
1,900,587	+		DZA65_RS09025	0.79	+0.6
1,900,587	+				-1.9
1,900,587	+		DZA65_RS09025	0.79	-1.0
1,900,587	+		DZA65_RS09025	0.79	-1.3
1,900,588	-		DZA65_RS09025	0.79	-0.0
1,900,588	-		DZA65_RS09025	0.79	-0.6
1,900,588	-		DZA65_RS09025	0.79	-0.5
1,900,670	-		DZA65_RS09025	0.87	-0.1
1,900,801	+				-0.3
1,900,802	-				-1.6
1,900,802	-				+0.9
1,900,802	-				-0.1
1,900,830	+				-1.8
1,900,830	+				-2.1
1,900,830	+				-1.0
1,900,831	-				-0.6
1,900,837	+				-0.9
1,900,837	+				-0.2
1,900,837	+				-0.7
1,900,837	+				-0.7
1,900,838	-				-2.0
1,900,838	-				-2.0
1,900,838	-				-1.6
1,900,838	-				-0.6
1,900,838	-				-0.9
1,901,020	-		DZA65_RS09030	0.11	+0.2
1,901,062	+		DZA65_RS09030	0.14	-1.6
1,901,062	+		DZA65_RS09030	0.14	-1.4
1,901,062	+		DZA65_RS09030	0.14	-0.9
1,901,063	-		DZA65_RS09030	0.14	-0.7
1,901,063	-				-0.6
1,901,063	-		DZA65_RS09030	0.14	-1.4
1,901,063	-		DZA65_RS09030	0.14	-0.5
1,901,065	+		DZA65_RS09030	0.14	+0.4
1,901,066	-		DZA65_RS09030	0.14	-1.1
1,901,070	+				+0.7
1,901,071	-		DZA65_RS09030	0.15	+0.7
1,901,216	+		DZA65_RS09030	0.24	-0.2
1,901,296	+		DZA65_RS09030	0.29	-0.3
1,901,297	-		DZA65_RS09030	0.29	+0.5
1,901,297	-		DZA65_RS09030	0.29	-0.0
1,901,300	+		DZA65_RS09030	0.29	-1.3
1,901,301	-		DZA65_RS09030	0.29	-0.9
1,901,301	-		DZA65_RS09030	0.29	-0.9
1,901,301	-		DZA65_RS09030	0.29	-0.9
1,901,468	+		DZA65_RS09030	0.40	-2.7
1,901,468	+		DZA65_RS09030	0.40	-1.6
1,901,468	+		DZA65_RS09030	0.40	-1.0
1,901,478	-		DZA65_RS09030	0.40	-1.3
1,901,533	+		DZA65_RS09030	0.44	-0.5
1,901,534	-		DZA65_RS09030	0.44	+0.4
1,901,534	-		DZA65_RS09030	0.44	-0.7
1,901,534	-		DZA65_RS09030	0.44	-0.4
1,901,534	-		DZA65_RS09030	0.44	-0.5
1,901,571	+		DZA65_RS09030	0.46	-2.3
1,901,796	+		DZA65_RS09030	0.60	-0.8
1,901,796	+		DZA65_RS09030	0.60	-0.8
1,901,796	+		DZA65_RS09030	0.60	-2.3
1,901,796	+		DZA65_RS09030	0.60	-3.6
1,901,796	+		DZA65_RS09030	0.60	-2.3
1,901,796	+		DZA65_RS09030	0.60	-1.7
1,901,797	-		DZA65_RS09030	0.60	-0.6