Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08465

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,784,687	+				-0.2
1,784,692	+				-1.1
1,784,692	+				+0.5
1,784,693	-				+0.3
1,784,752	+				+0.8
1,784,752	+				-0.2
1,784,760	-				-0.6
1,784,760	-				+0.2
1,784,906	+		DZA65_RS08460	0.12	+0.2
1,784,906	+		DZA65_RS08460	0.12	-0.0
1,784,906	+		DZA65_RS08460	0.12	-0.9
1,784,906	+		DZA65_RS08460	0.12	+0.5
1,784,906	+		DZA65_RS08460	0.12	-0.9
1,784,907	-		DZA65_RS08460	0.12	+0.4
1,784,907	-		DZA65_RS08460	0.12	+0.0
1,785,052	+		DZA65_RS08460	0.30	-0.5
1,785,052	+				+0.4
1,785,095	+		DZA65_RS08460	0.35	+1.6
1,785,095	+				-1.2
1,785,095	+		DZA65_RS08460	0.35	-0.2
1,785,096	-		DZA65_RS08460	0.35	+0.1
1,785,152	+		DZA65_RS08460	0.42	-2.8
1,785,152	+				-0.8
1,785,152	+		DZA65_RS08460	0.42	-0.8
1,785,152	+		DZA65_RS08460	0.42	+1.2
1,785,152	+		DZA65_RS08460	0.42	+0.0
1,785,153	-		DZA65_RS08460	0.42	-1.5
1,785,174	+		DZA65_RS08460	0.44	-0.8
1,785,174	+		DZA65_RS08460	0.44	-0.7
1,785,174	+		DZA65_RS08460	0.44	+1.0
1,785,175	-		DZA65_RS08460	0.45	-1.8
1,785,175	-		DZA65_RS08460	0.45	-1.0
1,785,175	-		DZA65_RS08460	0.45	-0.1
1,785,175	-		DZA65_RS08460	0.45	+1.4
1,785,247	+		DZA65_RS08460	0.53	-1.7
1,785,247	+		DZA65_RS08460	0.53	-0.8
1,785,248	-		DZA65_RS08460	0.53	-0.4
1,785,248	-		DZA65_RS08460	0.53	+0.1
1,785,265	-		DZA65_RS08460	0.55	-0.2
1,785,383	+		DZA65_RS08460	0.70	-0.4
1,785,464	-		DZA65_RS08460	0.79	+0.0
1,785,525	+		DZA65_RS08460	0.87	-0.7
1,785,525	+		DZA65_RS08460	0.87	+0.8
1,785,525	+		DZA65_RS08460	0.87	-0.5
1,785,525	+		DZA65_RS08460	0.87	+0.0
1,785,526	-		DZA65_RS08460	0.87	-2.2
1,785,526	-		DZA65_RS08460	0.87	+0.1
1,785,526	-		DZA65_RS08460	0.87	-2.4
1,785,583	-				-1.0
1,785,623	-				-0.2
1,785,633	+				+0.1
1,785,634	-				-1.0
1,785,634	-				-0.0
1,785,634	-				-0.4
1,785,636	+				-0.9
1,785,636	+				-0.5
1,785,636	+				+0.0
1,785,636	+				+1.2
1,785,637	-				-1.2
1,785,637	-				-0.1
1,785,637	-				-0.5
1,785,637	-				+0.4
1,786,039	+		DZA65_RS08465	0.47	-0.7
1,786,046	+		DZA65_RS08465	0.48	+2.1
1,786,046	+		DZA65_RS08465	0.48	-1.0
1,786,046	+		DZA65_RS08465	0.48	+0.0
1,786,046	+		DZA65_RS08465	0.48	-1.4
1,786,046	+		DZA65_RS08465	0.48	+0.7
1,786,046	+		DZA65_RS08465	0.48	-1.7
1,786,046	+		DZA65_RS08465	0.48	-0.0
1,786,046	+		DZA65_RS08465	0.48	+0.1
1,786,046	+		DZA65_RS08465	0.48	-1.1
1,786,047	-		DZA65_RS08465	0.48	-0.8
1,786,047	-		DZA65_RS08465	0.48	-0.2
1,786,047	-		DZA65_RS08465	0.48	+0.2
1,786,047	-		DZA65_RS08465	0.48	+0.3
1,786,047	-		DZA65_RS08465	0.48	-0.7
1,786,047	-		DZA65_RS08465	0.48	-1.0
1,786,047	-		DZA65_RS08465	0.48	-1.2
1,786,047	-		DZA65_RS08465	0.48	+0.5
1,786,047	-		DZA65_RS08465	0.48	-0.6
1,786,047	-		DZA65_RS08465	0.48	-1.2
1,786,047	-		DZA65_RS08465	0.48	-0.4
1,786,115	-		DZA65_RS08465	0.56	-0.6
1,786,115	-		DZA65_RS08465	0.56	-1.8
1,786,201	+		DZA65_RS08465	0.66	+0.0
1,786,202	-		DZA65_RS08465	0.66	-1.1
1,786,202	-		DZA65_RS08465	0.66	+0.1
1,786,202	-		DZA65_RS08465	0.66	+0.1
1,786,382	+		DZA65_RS08465	0.87	-0.5
1,786,383	-		DZA65_RS08465	0.87	-0.2
1,786,383	-		DZA65_RS08465	0.87	-0.1
1,786,383	-		DZA65_RS08465	0.87	+0.3
1,786,383	-		DZA65_RS08465	0.87	-0.7
1,786,383	-		DZA65_RS08465	0.87	-0.5
1,786,393	-		DZA65_RS08465	0.88	-2.2
1,786,393	-		DZA65_RS08465	0.88	-0.1
1,786,393	-				+0.0
1,786,433	+				-1.7
1,786,455	+				+0.3
1,786,455	+				+1.8
1,786,455	+				-0.0
1,786,455	+				+0.7
1,786,455	+				-0.4
1,786,455	+				-0.4
1,786,455	+				-0.1
1,786,455	+				-0.5
1,786,455	+				+0.3
1,786,455	+				-0.9
1,786,455	+				-1.5
1,786,455	+				-1.0
1,786,456	-				+0.8
1,786,456	-				+1.5
1,786,456	-				-0.4
1,786,456	-				-0.3
1,786,456	-				-0.8
1,786,456	-				-1.0
1,786,456	-				-0.1
1,786,456	-				+0.5
1,786,456	-				+0.1
1,786,456	-				-1.8
1,786,456	-				-0.4
1,786,456	-				-0.5
1,786,456	-				+1.2
1,786,456	-				-1.0
1,786,456	-				+2.6
1,786,456	-				-0.5
1,786,456	-				+0.0
1,786,456	-				+0.0
1,786,456	-				+0.2
1,786,456	-				+0.4
1,786,456	-				+0.5
1,786,456	-				-2.2
1,786,456	-				-2.7
1,786,552	+				-0.3
1,786,642	+		DZA65_RS08470	0.18	+1.1
1,786,829	+		DZA65_RS08470	0.38	+0.2
1,786,848	+		DZA65_RS08470	0.40	-0.2
1,786,848	+		DZA65_RS08470	0.40	-0.5
1,786,848	+		DZA65_RS08470	0.40	+0.8
1,786,848	+		DZA65_RS08470	0.40	-0.6
1,786,849	-		DZA65_RS08470	0.41	+0.7
1,786,849	-		DZA65_RS08470	0.41	+0.5
1,786,849	-		DZA65_RS08470	0.41	-0.3
1,786,849	-		DZA65_RS08470	0.41	-2.0
1,786,849	-		DZA65_RS08470	0.41	+0.2
1,787,005	-		DZA65_RS08470	0.58	+0.0
1,787,106	+		DZA65_RS08470	0.69	+0.1
1,787,106	+		DZA65_RS08470	0.69	-1.4
1,787,107	-		DZA65_RS08470	0.69	-0.2
1,787,107	-		DZA65_RS08470	0.69	-1.8
1,787,128	+		DZA65_RS08470	0.72	-0.3
1,787,128	+		DZA65_RS08470	0.72	-0.0
1,787,129	-		DZA65_RS08470	0.72	-1.0
1,787,129	-		DZA65_RS08470	0.72	-0.6
1,787,192	+		DZA65_RS08470	0.79	-0.5
1,787,326	+				-1.7
1,787,327	-				+0.2
1,787,386	+				+0.7
1,787,386	+				-0.1
1,787,386	+				+0.0
1,787,387	-				-0.7
1,787,387	-				+0.8
1,787,387	-				-1.1
1,787,408	+				+0.8
1,787,408	+				-1.0
1,787,409	-				-0.4
1,787,409	-				-0.4
1,787,409	-				+0.0
1,787,409	-				-0.8
1,787,420	+				-0.4
1,787,421	-				-1.0
1,787,433	+				-1.2
1,787,475	+		DZA65_RS08475	0.11	-0.5
1,787,475	+		DZA65_RS08475	0.11	-1.1
1,787,475	+		DZA65_RS08475	0.11	-0.3
1,787,475	+		DZA65_RS08475	0.11	-2.4
1,787,475	+		DZA65_RS08475	0.11	-1.2
1,787,475	+		DZA65_RS08475	0.11	-0.4
1,787,475	+		DZA65_RS08475	0.11	-0.8
1,787,475	+		DZA65_RS08475	0.11	+1.3
1,787,475	+		DZA65_RS08475	0.11	-2.2
1,787,475	+		DZA65_RS08475	0.11	+0.6
1,787,476	-		DZA65_RS08475	0.11	-0.9
1,787,476	-		DZA65_RS08475	0.11	+0.1
1,787,476	-		DZA65_RS08475	0.11	-0.7
1,787,490	+		DZA65_RS08475	0.12	-0.5