Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06945

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,437,572	+				+0.9
1,437,573	-				-0.7
1,437,573	-				-0.3
1,437,600	+				+1.6
1,437,638	-				-0.7
1,437,644	+				+0.3
1,437,644	+				+0.2
1,437,644	+				+0.3
1,437,644	+				+0.5
1,437,644	+				-0.7
1,437,645	-				-1.1
1,437,645	-				+0.3
1,437,645	-				-0.7
1,437,667	-				+0.7
1,437,722	+				+0.5
1,437,723	+				+0.2
1,437,724	-		DZA65_RS06940	0.10	-0.7
1,437,724	-		DZA65_RS06940	0.10	+0.4
1,437,735	+		DZA65_RS06940	0.12	-0.9
1,437,736	-		DZA65_RS06940	0.12	+1.2
1,437,749	+		DZA65_RS06940	0.14	-0.8
1,437,749	+		DZA65_RS06940	0.14	-0.1
1,437,766	-		DZA65_RS06940	0.16	+0.9
1,437,780	+		DZA65_RS06940	0.18	-0.4
1,437,781	-		DZA65_RS06940	0.18	-0.5
1,437,801	-		DZA65_RS06940	0.21	-0.3
1,437,801	-		DZA65_RS06940	0.21	-0.2
1,437,837	+		DZA65_RS06940	0.26	-1.6
1,437,837	+		DZA65_RS06940	0.26	-0.3
1,437,964	+		DZA65_RS06940	0.44	-0.1
1,437,964	+		DZA65_RS06940	0.44	+1.9
1,437,964	+		DZA65_RS06940	0.44	-1.1
1,437,964	+		DZA65_RS06940	0.44	-0.5
1,437,965	-		DZA65_RS06940	0.44	+1.0
1,437,965	-		DZA65_RS06940	0.44	+0.2
1,437,965	-		DZA65_RS06940	0.44	-0.3
1,437,965	-		DZA65_RS06940	0.44	+0.4
1,437,965	-		DZA65_RS06940	0.44	+0.1
1,437,965	-		DZA65_RS06940	0.44	+0.4
1,438,055	-		DZA65_RS06940	0.56	-1.9
1,438,064	+		DZA65_RS06940	0.57	+0.2
1,438,071	+		DZA65_RS06940	0.58	-0.3
1,438,071	+		DZA65_RS06940	0.58	-2.3
1,438,071	+		DZA65_RS06940	0.58	-1.1
1,438,071	+		DZA65_RS06940	0.58	-0.1
1,438,071	+		DZA65_RS06940	0.58	+0.2
1,438,071	+		DZA65_RS06940	0.58	-0.3
1,438,071	+		DZA65_RS06940	0.58	+0.2
1,438,072	-		DZA65_RS06940	0.59	-1.5
1,438,072	-		DZA65_RS06940	0.59	+0.2
1,438,072	-		DZA65_RS06940	0.59	+0.7
1,438,072	-		DZA65_RS06940	0.59	-0.5
1,438,072	-		DZA65_RS06940	0.59	-0.4
1,438,072	-		DZA65_RS06940	0.59	+0.1
1,438,072	-				-1.1
1,438,161	-		DZA65_RS06940	0.71	+0.5
1,438,218	+		DZA65_RS06940	0.79	-0.7
1,438,219	-		DZA65_RS06940	0.79	-0.7
1,438,272	+		DZA65_RS06940	0.86	+0.6
1,438,272	+		DZA65_RS06940	0.86	+0.0
1,438,272	+		DZA65_RS06940	0.86	+0.0
1,438,272	+		DZA65_RS06940	0.86	-0.2
1,438,272	+		DZA65_RS06940	0.86	-0.2
1,438,273	-		DZA65_RS06940	0.87	+0.3
1,438,273	-		DZA65_RS06940	0.87	+0.9
1,438,273	-		DZA65_RS06940	0.87	+0.6
1,438,273	-		DZA65_RS06940	0.87	-0.9
1,438,273	-		DZA65_RS06940	0.87	+0.9
1,438,273	-		DZA65_RS06940	0.87	-0.3
1,438,273	-		DZA65_RS06940	0.87	+0.6
1,438,273	-		DZA65_RS06940	0.87	-0.9
1,438,273	-		DZA65_RS06940	0.87	-1.7
1,438,273	-		DZA65_RS06940	0.87	-0.5
1,438,273	-		DZA65_RS06940	0.87	-0.8
1,438,284	+		DZA65_RS06940	0.88	+0.4
1,438,284	+		DZA65_RS06940	0.88	-2.3
1,438,285	-		DZA65_RS06940	0.88	-1.1
1,438,302	+				+0.5
1,438,329	+				-0.7
1,438,330	-				+0.4
1,438,346	-				-0.7
1,438,403	-				-0.1
1,438,438	-				+0.2
1,438,441	+				+0.9
1,438,441	+				+1.3
1,438,442	-				+0.9
1,438,459	+				+0.2
1,438,460	-				-0.5
1,438,460	-				-0.3
1,438,460	-				-0.3
1,438,460	-				+1.1
1,438,511	+				+3.2
1,438,512	-				-0.6
1,438,513	+				+0.4
1,438,514	-				-0.7
1,438,537	-				+0.6
1,438,537	-				-0.1
1,438,599	-				-2.4
1,438,605	+				-0.9
1,438,605	+				+0.1
1,438,667	+				+0.2
1,438,667	+				-0.1
1,438,667	+				-1.1
1,438,668	-				-0.3
1,438,670	+				-1.6
1,438,713	+		DZA65_RS06945	0.13	-0.1
1,438,713	+		DZA65_RS06945	0.13	-1.3
1,438,713	+		DZA65_RS06945	0.13	-1.4
1,438,713	+		DZA65_RS06945	0.13	-1.0
1,438,713	+		DZA65_RS06945	0.13	-0.7
1,438,713	+		DZA65_RS06945	0.13	-1.9
1,438,714	-		DZA65_RS06945	0.14	-0.7
1,438,714	-		DZA65_RS06945	0.14	-1.7
1,438,714	-		DZA65_RS06945	0.14	-1.7
1,438,714	-		DZA65_RS06945	0.14	+0.3
1,438,714	-		DZA65_RS06945	0.14	-0.8
1,438,714	-		DZA65_RS06945	0.14	-1.7
1,438,714	-		DZA65_RS06945	0.14	-0.1
1,438,714	-		DZA65_RS06945	0.14	-0.9
1,438,716	+		DZA65_RS06945	0.14	-0.4
1,438,716	+		DZA65_RS06945	0.14	-1.1
1,438,716	+		DZA65_RS06945	0.14	-1.9
1,438,717	-		DZA65_RS06945	0.14	-1.5
1,438,717	-		DZA65_RS06945	0.14	-1.0
1,438,717	-		DZA65_RS06945	0.14	-2.7
1,438,814	+		DZA65_RS06945	0.23	-1.8
1,438,815	-		DZA65_RS06945	0.23	-1.1
1,438,861	+		DZA65_RS06945	0.28	-0.4
1,438,861	+		DZA65_RS06945	0.28	-0.5
1,438,861	+		DZA65_RS06945	0.28	-0.1
1,438,862	-		DZA65_RS06945	0.28	-0.7
1,438,862	-		DZA65_RS06945	0.28	-1.4
1,438,862	-		DZA65_RS06945	0.28	-0.9
1,438,862	-		DZA65_RS06945	0.28	-1.7
1,438,862	-		DZA65_RS06945	0.28	-0.3
1,438,986	+		DZA65_RS06945	0.40	-1.5
1,438,986	+		DZA65_RS06945	0.40	-0.6
1,438,986	+		DZA65_RS06945	0.40	+1.0
1,438,986	+		DZA65_RS06945	0.40	-2.3
1,438,986	+		DZA65_RS06945	0.40	-0.4
1,438,986	+		DZA65_RS06945	0.40	-0.3
1,438,987	-		DZA65_RS06945	0.40	-0.6
1,438,987	-		DZA65_RS06945	0.40	+1.9
1,439,045	-		DZA65_RS06945	0.45	-0.8
1,439,045	-				+1.9
1,439,072	+		DZA65_RS06945	0.48	-0.3
1,439,072	+		DZA65_RS06945	0.48	-0.6
1,439,073	-		DZA65_RS06945	0.48	-1.7
1,439,090	+		DZA65_RS06945	0.49	-1.3
1,439,091	-		DZA65_RS06945	0.50	+0.6
1,439,121	+		DZA65_RS06945	0.52	+0.3
1,439,121	+		DZA65_RS06945	0.52	-0.4
1,439,121	+		DZA65_RS06945	0.52	-1.1
1,439,121	+		DZA65_RS06945	0.52	-1.3
1,439,121	+		DZA65_RS06945	0.52	-0.7
1,439,122	-		DZA65_RS06945	0.53	-0.5
1,439,122	-		DZA65_RS06945	0.53	-2.0
1,439,149	+		DZA65_RS06945	0.55	-1.1
1,439,149	+		DZA65_RS06945	0.55	-1.3
1,439,149	+		DZA65_RS06945	0.55	-0.4
1,439,149	+		DZA65_RS06945	0.55	-0.9
1,439,149	+		DZA65_RS06945	0.55	-0.9
1,439,149	+		DZA65_RS06945	0.55	-0.4
1,439,149	+		DZA65_RS06945	0.55	-1.1
1,439,149	+				+0.5
1,439,149	+		DZA65_RS06945	0.55	-1.2
1,439,149	+		DZA65_RS06945	0.55	-0.5
1,439,150	-		DZA65_RS06945	0.55	-1.9
1,439,150	-		DZA65_RS06945	0.55	-1.1
1,439,150	-		DZA65_RS06945	0.55	-1.7
1,439,367	-		DZA65_RS06945	0.76	-0.9
1,439,373	+		DZA65_RS06945	0.77	-1.9
1,439,447	+		DZA65_RS06945	0.84	-0.7
1,439,486	-		DZA65_RS06945	0.87	-1.1
1,439,519	+				-0.7
1,439,519	+				-1.6
1,439,519	+				-0.5
1,439,519	+				-3.9
1,439,519	+				-1.7
1,439,519	+				-1.7
1,439,519	+				-0.2
1,439,519	+				-1.6
1,439,519	+				-1.2
1,439,519	+				-0.3
1,439,519	+				-0.6
1,439,520	-				-1.8
1,439,520	-				-2.0
1,439,520	-				-1.1
1,439,520	-				-1.2
1,439,520	-				-1.1
1,439,616	+				+0.2
1,439,616	+				+0.1
1,439,616	+				-0.5
1,439,616	+				+0.1
1,439,616	+				-1.2
1,439,617	-				-0.8
1,439,617	-				-0.5
1,439,617	-				+2.4
1,439,617	-				-1.2
1,439,617	-				+0.2
1,439,617	-				+0.5
1,439,617	-				+0.4
1,439,617	-				-1.2
1,439,620	+				+0.6
1,439,620	+				+2.2
1,439,620	+				-0.1
1,439,620	+				+0.6
1,439,620	+				-0.0
1,439,621	-				-0.6
1,439,621	-				-1.4
1,439,652	+				-0.1
1,439,653	-				-0.3
1,439,661	+				+0.1
1,439,661	+				-0.3
1,439,665	-				-1.4
1,439,665	-				-0.3
1,439,698	+				+0.3
1,439,698	+				+2.7
1,439,699	-				+0.3
1,439,782	+		DZA65_RS06950	0.19	+0.9
1,439,783	-		DZA65_RS06950	0.20	-0.5
1,439,783	-		DZA65_RS06950	0.20	+0.3
1,439,840	+		DZA65_RS06950	0.27	-0.2
1,439,841	-		DZA65_RS06950	0.28	-1.5
1,439,841	-		DZA65_RS06950	0.28	+1.5
1,439,842	+		DZA65_RS06950	0.28	-1.0
1,439,842	+		DZA65_RS06950	0.28	+0.3
1,439,842	+		DZA65_RS06950	0.28	-0.3
1,439,843	-		DZA65_RS06950	0.28	-0.2
1,439,843	-		DZA65_RS06950	0.28	-2.8
1,439,843	-		DZA65_RS06950	0.28	-0.1
1,439,888	-		DZA65_RS06950	0.34	+0.3
1,439,896	+		DZA65_RS06950	0.35	-0.5
1,439,896	+		DZA65_RS06950	0.35	+0.9
1,439,897	-		DZA65_RS06950	0.35	-1.9
1,439,897	-		DZA65_RS06950	0.35	-0.7
1,439,897	-		DZA65_RS06950	0.35	-2.3
1,440,016	+		DZA65_RS06950	0.52	-0.4
1,440,016	+		DZA65_RS06950	0.52	-0.5
1,440,017	-		DZA65_RS06950	0.52	-1.0
1,440,017	-		DZA65_RS06950	0.52	+0.4
1,440,017	-		DZA65_RS06950	0.52	-1.7
1,440,017	-		DZA65_RS06950	0.52	+0.6
1,440,143	+		DZA65_RS06950	0.69	-0.4
1,440,144	-		DZA65_RS06950	0.69	+0.2
1,440,144	-		DZA65_RS06950	0.69	-0.3
1,440,177	+		DZA65_RS06950	0.74	-0.6
1,440,177	+		DZA65_RS06950	0.74	+0.1
1,440,177	+				+0.5
1,440,177	+		DZA65_RS06950	0.74	+1.0
1,440,178	-		DZA65_RS06950	0.74	-0.1
1,440,178	-		DZA65_RS06950	0.74	+0.2
1,440,178	-				-0.1
1,440,181	+		DZA65_RS06950	0.74	-0.8
1,440,181	+		DZA65_RS06950	0.74	+0.2
1,440,181	+		DZA65_RS06950	0.74	+0.4
1,440,182	-		DZA65_RS06950	0.75	+0.5
1,440,182	-		DZA65_RS06950	0.75	-0.9
1,440,182	-		DZA65_RS06950	0.75	-0.1
1,440,182	-		DZA65_RS06950	0.75	-0.3
1,440,182	-		DZA65_RS06950	0.75	-0.4
1,440,182	-		DZA65_RS06950	0.75	-1.0
1,440,220	-		DZA65_RS06950	0.80	-2.8
1,440,253	+		DZA65_RS06950	0.84	-0.3
1,440,253	+		DZA65_RS06950	0.84	-0.5
1,440,253	+		DZA65_RS06950	0.84	-0.1
1,440,253	+		DZA65_RS06950	0.84	-0.7
1,440,254	-		DZA65_RS06950	0.84	-0.2
1,440,254	-		DZA65_RS06950	0.84	+0.1
1,440,254	-		DZA65_RS06950	0.84	-0.1
1,440,271	+		DZA65_RS06950	0.87	-2.3
1,440,271	+		DZA65_RS06950	0.87	-1.2
1,440,271	+		DZA65_RS06950	0.87	+0.2
1,440,271	+		DZA65_RS06950	0.87	-1.1
1,440,272	-		DZA65_RS06950	0.87	+0.1
1,440,272	-		DZA65_RS06950	0.87	-0.1
1,440,272	-		DZA65_RS06950	0.87	-0.6
1,440,272	-		DZA65_RS06950	0.87	+0.7
1,440,272	-		DZA65_RS06950	0.87	-0.6
1,440,362	+				-0.8
1,440,363	-				-0.6
1,440,363	-				+0.7
1,440,364	+				+0.2
1,440,364	+				+0.7
1,440,365	-				-0.4
1,440,410	-				-0.8
1,440,424	+				+0.6
1,440,424	+				+0.7
1,440,424	+				+0.9
1,440,424	+				+0.2
1,440,425	-				-0.7
1,440,425	-				+0.6
1,440,425	-				-1.0
1,440,425	-				-1.1
1,440,432	+				-0.2
1,440,432	+				-0.0
1,440,433	-				+0.9
1,440,433	-				-0.2
1,440,451	+				+0.1
1,440,451	+				-0.7
1,440,466	+				+0.1
1,440,519	+				-0.4
1,440,520	-				-0.8
1,440,520	-				-0.4