Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06745

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,397,849	+		DZA65_RS06735	0.83	-0.4
1,397,849	+		DZA65_RS06735	0.83	+0.3
1,397,849	+		DZA65_RS06735	0.83	-0.4
1,397,850	-		DZA65_RS06735	0.83	-0.7
1,397,850	-		DZA65_RS06735	0.83	+0.9
1,397,918	+				+0.9
1,397,918	+				-0.3
1,397,918	+				+0.0
1,397,919	-				+1.1
1,397,919	-				-1.8
1,397,919	-				-0.5
1,397,919	-				+1.2
1,397,919	-				+1.4
1,397,968	+				+0.9
1,397,969	-				-0.1
1,397,969	-				+0.1
1,398,012	-				-0.4
1,398,104	+				+1.7
1,398,104	+				+0.7
1,398,105	-				-1.9
1,398,105	-				-0.7
1,398,105	-				-0.1
1,398,105	-				-1.1
1,398,105	-				+1.3
1,398,113	+				+0.6
1,398,113	+				+0.2
1,398,113	+				+0.0
1,398,113	+				+0.2
1,398,113	+				-0.2
1,398,114	-				-1.7
1,398,114	-				+0.4
1,398,114	-				-0.8
1,398,114	-				-0.2
1,398,114	-				-1.7
1,398,114	-				-0.1
1,398,114	-				+0.3
1,398,114	-				-1.1
1,398,121	+				+0.3
1,398,121	+				+0.7
1,398,122	-				+0.3
1,398,122	-				-1.0
1,398,122	-				-0.4
1,398,122	-				+0.5
1,398,139	+				+1.7
1,398,140	-				-0.7
1,398,140	-				-2.3
1,398,140	-				+0.4
1,398,140	-				-1.1
1,398,140	-				-0.6
1,398,167	+				+0.3
1,398,168	-				+1.5
1,398,218	+				-0.8
1,398,219	-				+2.5
1,398,225	+				+1.4
1,398,225	+				-1.7
1,398,225	+				-0.3
1,398,227	+				+0.2
1,398,227	+				+0.2
1,398,228	-				+1.0
1,398,245	+				-0.6
1,398,253	+				+0.9
1,398,253	+				+0.8
1,398,254	-				-2.4
1,398,254	-				+0.1
1,398,261	+				-0.3
1,398,304	-				-0.1
1,398,751	-		DZA65_RS06740	0.89	-2.1
1,398,810	+				-1.0
1,398,810	+				+0.5
1,398,810	+				+0.2
1,398,810	+				-2.3
1,398,811	-				-1.3
1,398,844	-				-0.2
1,398,867	+				-0.1
1,398,867	+				-1.7
1,398,888	+				+2.7
1,398,888	+				-1.3
1,398,888	+				-1.1
1,398,889	-				+0.7
1,398,889	-				-1.2
1,398,913	+				+0.1
1,398,916	+				-0.5
1,398,916	+				-0.2
1,398,916	+				-0.5
1,398,916	+				-0.7
1,398,916	+				+0.5
1,398,916	+				-1.3
1,398,916	+				-1.5
1,398,916	+				-1.1
1,398,916	+				-0.2
1,398,916	+				+1.1
1,398,916	+				+0.9
1,398,916	+				-0.2
1,398,916	+				+1.5
1,398,916	+				-0.7
1,398,916	+				+0.3
1,398,917	-				-2.3
1,398,917	-				-0.1
1,398,917	-				+0.3
1,398,917	-				+0.1
1,398,917	-				+1.1
1,398,917	-				+0.1
1,398,917	-				-2.5
1,398,917	-				-2.1
1,398,917	-				-0.8
1,398,917	-				-0.7
1,398,917	-				-0.9
1,398,917	-				-0.1
1,398,917	-				-0.9
1,398,917	-				-0.7
1,398,917	-				-0.4
1,398,917	-				-0.8
1,398,917	-				-0.8
1,398,958	-				+0.1
1,399,017	+		DZA65_RS06745	0.11	-1.8
1,399,018	-		DZA65_RS06745	0.11	-0.3
1,399,081	+		DZA65_RS06745	0.15	-0.6
1,399,081	+		DZA65_RS06745	0.15	-1.0
1,399,081	+		DZA65_RS06745	0.15	+1.1
1,399,081	+		DZA65_RS06745	0.15	-0.3
1,399,123	-		DZA65_RS06745	0.17	-0.3
1,399,189	-		DZA65_RS06745	0.21	-1.3
1,399,278	+		DZA65_RS06745	0.27	-1.3
1,399,278	+		DZA65_RS06745	0.27	-0.5
1,399,279	-		DZA65_RS06745	0.27	+1.1
1,399,306	+		DZA65_RS06745	0.28	+0.6
1,399,306	+		DZA65_RS06745	0.28	+0.0
1,399,306	+		DZA65_RS06745	0.28	-0.7
1,399,306	+		DZA65_RS06745	0.28	+0.2
1,399,306	+		DZA65_RS06745	0.28	-1.4
1,399,307	-		DZA65_RS06745	0.29	-0.1
1,399,307	-		DZA65_RS06745	0.29	-0.8
1,399,307	-		DZA65_RS06745	0.29	-0.1
1,399,468	+		DZA65_RS06745	0.38	-1.3
1,399,468	+		DZA65_RS06745	0.38	-0.4
1,399,468	+		DZA65_RS06745	0.38	+1.7
1,399,469	-		DZA65_RS06745	0.38	-0.6
1,399,469	-		DZA65_RS06745	0.38	+0.5
1,399,469	-		DZA65_RS06745	0.38	-1.3
1,399,589	-		DZA65_RS06745	0.46	-1.0
1,399,688	+		DZA65_RS06745	0.52	-0.9
1,399,756	+		DZA65_RS06745	0.56	-0.2
1,399,757	-		DZA65_RS06745	0.56	+0.9
1,399,807	+				+0.9
1,399,807	+		DZA65_RS06745	0.59	-0.4
1,399,808	-		DZA65_RS06745	0.59	-0.2
1,399,808	-		DZA65_RS06745	0.59	-1.7
1,399,808	-		DZA65_RS06745	0.59	-0.6
1,399,808	-		DZA65_RS06745	0.59	-0.2
1,399,828	+		DZA65_RS06745	0.60	-1.4
1,399,828	+		DZA65_RS06745	0.60	-0.9
1,399,828	+		DZA65_RS06745	0.60	-0.2
1,399,828	+		DZA65_RS06745	0.60	-1.3
1,399,829	-		DZA65_RS06745	0.60	-0.6
1,399,829	-		DZA65_RS06745	0.60	-1.4
1,399,930	-		DZA65_RS06745	0.66	+0.2
1,399,991	+		DZA65_RS06745	0.70	-1.1
1,399,991	+		DZA65_RS06745	0.70	-0.3
1,399,992	-				+2.5
1,400,134	+		DZA65_RS06745	0.79	-1.1
1,400,134	+		DZA65_RS06745	0.79	+0.7
1,400,134	+		DZA65_RS06745	0.79	+0.3
1,400,134	+		DZA65_RS06745	0.79	+0.7
1,400,134	+		DZA65_RS06745	0.79	-0.4
1,400,134	+		DZA65_RS06745	0.79	-0.5
1,400,135	-		DZA65_RS06745	0.79	-0.5
1,400,135	-		DZA65_RS06745	0.79	+0.3
1,400,135	-		DZA65_RS06745	0.79	-0.1
1,400,170	+		DZA65_RS06745	0.81	-0.4
1,400,170	+		DZA65_RS06745	0.81	-0.4
1,400,170	+		DZA65_RS06745	0.81	-1.6
1,400,171	-		DZA65_RS06745	0.81	+0.3
1,400,250	+		DZA65_RS06745	0.86	+0.8
1,400,251	-		DZA65_RS06745	0.86	-1.9
1,400,380	+				-0.4
1,400,380	+				-0.3
1,400,380	+				+0.4
1,400,380	+				-1.2
1,400,380	+				-1.0
1,400,380	+				-0.4
1,400,380	+				-0.8
1,400,380	+				+0.6
1,400,380	+				-1.7
1,400,380	+				-1.5
1,400,380	+				-0.3
1,400,381	-				+1.9
1,400,381	-				+0.6
1,400,381	-				-0.4
1,400,381	-				+0.3
1,400,381	-				+0.5
1,400,381	-				-0.8
1,400,381	-				-0.1
1,400,389	+				-1.5
1,400,389	+				+0.3
1,400,389	+				+0.2
1,400,390	-				+0.0
1,400,390	-				-1.4
1,400,480	-				+0.5
1,400,480	-				+0.1
1,400,539	+				+0.0
1,400,539	+				-0.9
1,400,539	+				-0.7
1,400,540	-				-0.6
1,400,560	+				-0.3
1,400,560	+				-0.6
1,400,561	-				-0.1
1,400,670	+		DZA65_RS06750	0.27	+0.9
1,400,670	+		DZA65_RS06750	0.27	+0.3
1,400,671	-		DZA65_RS06750	0.27	+0.2
1,400,726	+		DZA65_RS06750	0.40	+1.8
1,400,797	+		DZA65_RS06750	0.57	+0.2
1,400,797	+		DZA65_RS06750	0.57	-1.1
1,400,798	-		DZA65_RS06750	0.57	-1.1
1,400,963	+				+1.3
1,400,963	+				-0.6
1,400,964	-				-0.7
1,400,968	+				-2.4
1,400,969	-				-0.3
1,400,976	+				+0.7
1,400,976	+				+0.5
1,400,977	-				-0.3
1,400,977	-				+0.7
1,400,977	-				-0.7
1,400,977	-				-1.2
1,400,977	-				+0.6
1,400,987	-				+0.4
1,401,017	-				+0.2
1,401,055	+				-0.1
1,401,056	-				-0.4
1,401,069	+				-0.2
1,401,076	+				-0.4
1,401,077	-				+0.7
1,401,077	-				+0.2
1,401,162	+		DZA65_RS06755	0.14	-1.3
1,401,162	+		DZA65_RS06755	0.14	-0.1
1,401,162	+		DZA65_RS06755	0.14	-0.1
1,401,162	+		DZA65_RS06755	0.14	+0.3
1,401,163	-		DZA65_RS06755	0.14	-1.0
1,401,163	-		DZA65_RS06755	0.14	+0.7
1,401,163	-		DZA65_RS06755	0.14	-0.4
1,401,163	-		DZA65_RS06755	0.14	-0.4
1,401,163	-		DZA65_RS06755	0.14	+0.7
1,401,163	-		DZA65_RS06755	0.14	-0.1
1,401,174	+		DZA65_RS06755	0.15	-0.4
1,401,174	+		DZA65_RS06755	0.15	-0.4
1,401,174	+		DZA65_RS06755	0.15	-0.4
1,401,175	-		DZA65_RS06755	0.16	-0.1
1,401,175	-		DZA65_RS06755	0.16	+0.3
1,401,175	-		DZA65_RS06755	0.16	-0.7
1,401,236	+		DZA65_RS06755	0.24	-0.6
1,401,236	+				+0.3
1,401,358	+		DZA65_RS06755	0.42	-0.2
1,401,358	+		DZA65_RS06755	0.42	-0.9
1,401,453	+		DZA65_RS06755	0.56	-0.1
1,401,453	+		DZA65_RS06755	0.56	-0.2
1,401,454	-		DZA65_RS06755	0.56	-0.4
1,401,454	-		DZA65_RS06755	0.56	+1.0
1,401,454	-		DZA65_RS06755	0.56	-0.8
1,401,454	-		DZA65_RS06755	0.56	+0.6
1,401,454	-		DZA65_RS06755	0.56	+0.7