Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06685

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,383,350	+				+0.0
1,383,350	+				-0.4
1,383,350	+				+0.8
1,383,351	-				+1.9
1,383,351	-				+0.0
1,383,353	+				+0.0
1,383,371	-				-2.1
1,383,375	-				-1.0
1,383,375	-				+0.1
1,383,426	-				-0.3
1,383,505	+				-1.0
1,383,506	-				+0.9
1,383,549	+		DZA65_RS06660	0.51	-0.7
1,383,550	-		DZA65_RS06660	0.52	-0.7
1,383,550	-		DZA65_RS06660	0.52	-0.2
1,383,550	-		DZA65_RS06660	0.52	+0.3
1,383,550	-		DZA65_RS06660	0.52	+0.5
1,383,578	+		DZA65_RS06660	0.88	-0.9
1,383,578	+		DZA65_RS06660	0.88	+1.1
1,384,136	+				-0.1
1,384,205	+				-1.4
1,384,205	+				-0.5
1,384,205	+				+0.8
1,384,205	+				-0.7
1,384,205	+				-0.4
1,384,206	-				-1.1
1,384,206	-				-0.3
1,384,206	-				-0.7
1,384,206	-				-0.7
1,384,255	-				-0.2
1,384,437	+		DZA65_RS06685	0.10	-2.8
1,384,437	+		DZA65_RS06685	0.10	-2.5
1,384,437	+		DZA65_RS06685	0.10	-2.4
1,384,437	+		DZA65_RS06685	0.10	-3.8
1,384,438	-		DZA65_RS06685	0.11	-3.3
1,384,438	-		DZA65_RS06685	0.11	-2.5
1,384,441	+		DZA65_RS06685	0.11	-1.4
1,384,442	-		DZA65_RS06685	0.11	-2.1
1,384,442	-		DZA65_RS06685	0.11	-1.1
1,384,442	-		DZA65_RS06685	0.11	-2.1
1,384,538	+		DZA65_RS06685	0.17	-1.5
1,384,538	+		DZA65_RS06685	0.17	-1.1
1,384,539	-		DZA65_RS06685	0.17	-2.1
1,384,539	-		DZA65_RS06685	0.17	-3.0
1,384,539	-		DZA65_RS06685	0.17	-0.7
1,384,539	-		DZA65_RS06685	0.17	-2.8
1,384,610	-				-1.4
1,384,610	-		DZA65_RS06685	0.21	-2.4
1,384,610	-		DZA65_RS06685	0.21	-1.9
1,384,610	-				-0.7
1,384,692	+		DZA65_RS06685	0.26	-0.9
1,384,692	+		DZA65_RS06685	0.26	-4.0
1,384,692	+		DZA65_RS06685	0.26	-0.7
1,384,693	-		DZA65_RS06685	0.26	-2.5
1,384,777	+				-1.1
1,384,777	+		DZA65_RS06685	0.31	-0.7
1,384,777	+		DZA65_RS06685	0.31	-2.8
1,384,777	+		DZA65_RS06685	0.31	-2.2
1,384,778	-		DZA65_RS06685	0.31	-2.1
1,384,778	-		DZA65_RS06685	0.31	-0.9
1,384,778	-		DZA65_RS06685	0.31	-1.4
1,384,778	-		DZA65_RS06685	0.31	-1.7
1,384,778	-		DZA65_RS06685	0.31	-1.9
1,384,849	+		DZA65_RS06685	0.35	-2.6
1,384,850	-		DZA65_RS06685	0.35	-2.4
1,384,850	-		DZA65_RS06685	0.35	-2.4
1,384,866	+		DZA65_RS06685	0.36	+0.6
1,384,937	-		DZA65_RS06685	0.40	-3.0
1,384,937	-		DZA65_RS06685	0.40	-1.9
1,384,937	-		DZA65_RS06685	0.40	-4.4
1,384,973	-		DZA65_RS06685	0.43	-1.9
1,384,973	-		DZA65_RS06685	0.43	-1.4
1,384,973	-		DZA65_RS06685	0.43	-2.4
1,384,987	+		DZA65_RS06685	0.43	-1.2
1,384,987	+		DZA65_RS06685	0.43	-1.7
1,384,987	+		DZA65_RS06685	0.43	-3.8
1,384,988	-		DZA65_RS06685	0.44	-3.2
1,385,022	+		DZA65_RS06685	0.46	-1.7
1,385,240	-		DZA65_RS06685	0.59	-1.4
1,385,321	+		DZA65_RS06685	0.64	-2.2
1,385,332	+		DZA65_RS06685	0.64	-4.4
1,385,333	-		DZA65_RS06685	0.64	-2.5
1,385,354	-		DZA65_RS06685	0.66	-1.4
1,385,354	-		DZA65_RS06685	0.66	-3.2
1,385,356	+		DZA65_RS06685	0.66	-2.1
1,385,356	+		DZA65_RS06685	0.66	-0.9
1,385,389	+		DZA65_RS06685	0.68	-3.2
1,385,389	+		DZA65_RS06685	0.68	-2.1
1,385,389	+		DZA65_RS06685	0.68	-1.9
1,385,390	-		DZA65_RS06685	0.68	-2.4
1,385,390	-		DZA65_RS06685	0.68	-3.5
1,385,390	-		DZA65_RS06685	0.68	-1.2
1,385,418	-		DZA65_RS06685	0.69	-2.3
1,385,458	+		DZA65_RS06685	0.72	-2.7
1,385,458	+				-2.1
1,385,459	-		DZA65_RS06685	0.72	-1.2
1,385,459	-		DZA65_RS06685	0.72	-3.6
1,385,459	-		DZA65_RS06685	0.72	-1.4
1,385,459	-		DZA65_RS06685	0.72	-0.7
1,385,459	-		DZA65_RS06685	0.72	-2.2
1,385,486	+		DZA65_RS06685	0.73	-3.7
1,385,487	-		DZA65_RS06685	0.74	-1.4
1,385,487	-		DZA65_RS06685	0.74	-1.9
1,385,487	-		DZA65_RS06685	0.74	-5.3
1,385,487	-		DZA65_RS06685	0.74	-2.6
1,385,488	+		DZA65_RS06685	0.74	-2.7
1,385,488	+		DZA65_RS06685	0.74	-3.9
1,385,488	+		DZA65_RS06685	0.74	-1.8
1,385,488	+		DZA65_RS06685	0.74	-2.9
1,385,488	+				-0.7
1,385,488	+		DZA65_RS06685	0.74	-3.7
1,385,488	+		DZA65_RS06685	0.74	-4.5
1,385,488	+		DZA65_RS06685	0.74	-1.9
1,385,488	+		DZA65_RS06685	0.74	-1.2
1,385,488	+		DZA65_RS06685	0.74	-1.9
1,385,488	+		DZA65_RS06685	0.74	-2.6
1,385,489	-		DZA65_RS06685	0.74	-3.7
1,385,489	-		DZA65_RS06685	0.74	-1.1
1,385,489	-		DZA65_RS06685	0.74	-3.1
1,385,489	-		DZA65_RS06685	0.74	-3.6
1,385,489	-		DZA65_RS06685	0.74	-2.8
1,385,489	-		DZA65_RS06685	0.74	-2.7
1,385,489	-		DZA65_RS06685	0.74	+0.0
1,385,489	-		DZA65_RS06685	0.74	-1.9
1,385,489	-		DZA65_RS06685	0.74	-2.7
1,385,489	-		DZA65_RS06685	0.74	-2.8
1,385,489	-		DZA65_RS06685	0.74	-3.5
1,385,489	-		DZA65_RS06685	0.74	-3.3
1,385,489	-		DZA65_RS06685	0.74	-1.1
1,385,548	+		DZA65_RS06685	0.77	-0.8
1,385,548	+		DZA65_RS06685	0.77	-2.8
1,385,549	-		DZA65_RS06685	0.77	-0.7
1,385,549	-		DZA65_RS06685	0.77	-2.4
1,385,549	-		DZA65_RS06685	0.77	-0.7
1,385,549	-		DZA65_RS06685	0.77	-3.1
1,385,549	-		DZA65_RS06685	0.77	-2.8
1,385,549	-		DZA65_RS06685	0.77	-1.7
1,385,549	-		DZA65_RS06685	0.77	-2.5
1,385,608	+		DZA65_RS06685	0.81	-1.1
1,385,609	-		DZA65_RS06685	0.81	-2.7
1,385,665	+		DZA65_RS06685	0.84	-1.7
1,385,692	+		DZA65_RS06685	0.86	-2.3
1,385,692	+		DZA65_RS06685	0.86	-2.7
1,385,693	-		DZA65_RS06685	0.86	-3.7
1,385,737	+		DZA65_RS06685	0.89	-0.4
1,385,738	-		DZA65_RS06685	0.89	-3.2
1,385,738	-		DZA65_RS06685	0.89	-4.0
1,385,738	-		DZA65_RS06685	0.89	-3.4
1,385,738	-		DZA65_RS06685	0.89	-2.1
1,385,795	+				-3.2
1,385,795	+				-1.4
1,385,795	+				-2.5
1,385,795	+				-2.7
1,385,795	+				-3.7
1,385,796	-				-3.5
1,385,796	-				-3.2
1,385,796	-				-1.9
1,385,918	+				+0.5
1,385,919	-				-3.4
1,385,919	-				-2.0
1,385,927	+				-2.2
1,385,927	+				-3.6
1,385,927	+				-2.4
1,385,927	+				-1.5
1,385,927	+				-1.1
1,385,927	+				+0.2
1,385,927	+				-3.3
1,385,927	+				-1.0
1,385,927	+				-0.7
1,385,928	-				-2.9
1,385,928	-				-1.2
1,385,928	-				-2.4
1,385,928	-				-2.1
1,385,928	-				-1.7
1,385,928	-				-3.2
1,385,928	-				-1.5
1,385,928	-				-1.3
1,385,928	-				-2.2
1,385,943	+				-3.5
1,385,977	+				-1.8
1,385,977	+				-2.8
1,385,977	+				-0.7
1,385,985	+				-2.1
1,386,007	+				-2.8
1,386,007	+				-1.3
1,386,007	+				-2.2
1,386,007	+				-1.4
1,386,007	+				-1.7
1,386,007	+				-1.9
1,386,007	+				-2.5
1,386,007	+				-4.4
1,386,007	+				-1.1
1,386,008	-				-1.5
1,386,008	-				+0.2
1,386,073	+				-3.1
1,386,073	+				-1.5
1,386,181	+				+0.7
1,386,193	-				-0.2
1,386,203	+				-0.7
1,386,204	-				-0.4
1,386,217	-				+0.2
1,386,248	+				-0.1
1,386,248	+				-0.1
1,386,248	+				-0.1
1,386,249	-				+0.9
1,386,249	-				+0.3
1,386,251	+				-1.9
1,386,251	+				-0.4
1,386,252	-				+0.3
1,386,252	-				-0.1
1,386,252	-				+0.3
1,386,252	-				-0.9
1,386,370	+		DZA65_RS06690	0.13	-0.9
1,386,370	+		DZA65_RS06690	0.13	-0.1
1,386,370	+		DZA65_RS06690	0.13	-0.4
1,386,370	+		DZA65_RS06690	0.13	+0.5
1,386,370	+		DZA65_RS06690	0.13	-0.0
1,386,371	-		DZA65_RS06690	0.13	-0.7
1,386,371	-		DZA65_RS06690	0.13	+0.4
1,386,412	+		DZA65_RS06690	0.16	+0.4
1,386,412	+		DZA65_RS06690	0.16	-0.4
1,386,413	-		DZA65_RS06690	0.16	+0.0
1,386,547	+		DZA65_RS06690	0.27	-0.8
1,386,548	-		DZA65_RS06690	0.27	+0.2
1,386,555	-		DZA65_RS06690	0.28	-0.4
1,386,602	+		DZA65_RS06690	0.31	-0.3
1,386,602	+		DZA65_RS06690	0.31	+0.4
1,386,602	+		DZA65_RS06690	0.31	-0.9
1,386,602	+		DZA65_RS06690	0.31	+0.6
1,386,603	-		DZA65_RS06690	0.32	-0.4
1,386,603	-		DZA65_RS06690	0.32	-0.7
1,386,603	-		DZA65_RS06690	0.32	-0.6
1,386,603	-		DZA65_RS06690	0.32	+0.1
1,386,704	-		DZA65_RS06690	0.40	+0.9
1,386,724	+		DZA65_RS06690	0.41	+0.0
1,386,725	-		DZA65_RS06690	0.41	+0.0
1,386,725	-		DZA65_RS06690	0.41	+0.4
1,386,831	+		DZA65_RS06690	0.50	-1.0
1,386,832	-		DZA65_RS06690	0.50	+0.7
1,386,832	-		DZA65_RS06690	0.50	-0.1
1,386,832	-		DZA65_RS06690	0.50	+1.4
1,386,877	+		DZA65_RS06690	0.54	-1.1
1,386,877	+		DZA65_RS06690	0.54	+0.2
1,386,877	+		DZA65_RS06690	0.54	+0.2
1,386,877	+		DZA65_RS06690	0.54	-0.1
1,386,877	+		DZA65_RS06690	0.54	-0.2
1,386,877	+		DZA65_RS06690	0.54	+0.1
1,386,877	+		DZA65_RS06690	0.54	-0.3
1,386,877	+		DZA65_RS06690	0.54	+0.1
1,386,877	+		DZA65_RS06690	0.54	+0.8
1,386,877	+		DZA65_RS06690	0.54	-0.2
1,386,877	+		DZA65_RS06690	0.54	-2.5
1,386,877	+		DZA65_RS06690	0.54	-0.4
1,386,877	+		DZA65_RS06690	0.54	-1.1
1,386,877	+		DZA65_RS06690	0.54	-0.1
1,386,877	+		DZA65_RS06690	0.54	-0.1
1,386,878	-		DZA65_RS06690	0.54	-0.1
1,386,878	-		DZA65_RS06690	0.54	+1.2
1,386,878	-		DZA65_RS06690	0.54	-0.1
1,386,878	-		DZA65_RS06690	0.54	-0.7
1,386,878	-		DZA65_RS06690	0.54	+0.9
1,386,878	-		DZA65_RS06690	0.54	+0.6
1,386,878	-		DZA65_RS06690	0.54	-0.2
1,386,878	-		DZA65_RS06690	0.54	+0.7
1,386,878	-		DZA65_RS06690	0.54	+0.5
1,386,878	-		DZA65_RS06690	0.54	+0.9
1,386,878	-		DZA65_RS06690	0.54	-0.2
1,386,879	+		DZA65_RS06690	0.54	-0.4
1,386,879	+		DZA65_RS06690	0.54	+0.4
1,386,879	+		DZA65_RS06690	0.54	+0.1
1,386,879	+		DZA65_RS06690	0.54	-0.2
1,386,879	+		DZA65_RS06690	0.54	+0.4
1,386,879	+		DZA65_RS06690	0.54	+0.9
1,386,879	+		DZA65_RS06690	0.54	-0.5
1,386,879	+		DZA65_RS06690	0.54	+0.1
1,386,879	+		DZA65_RS06690	0.54	+0.3
1,386,879	+		DZA65_RS06690	0.54	+0.3
1,386,879	+		DZA65_RS06690	0.54	-1.0
1,386,880	-		DZA65_RS06690	0.54	-0.9
1,386,880	-		DZA65_RS06690	0.54	+0.4
1,386,880	-				+1.5
1,386,880	-		DZA65_RS06690	0.54	-0.3
1,386,880	-		DZA65_RS06690	0.54	-0.1
1,386,880	-		DZA65_RS06690	0.54	-0.2
1,386,881	+		DZA65_RS06690	0.54	+0.3
1,386,881	+		DZA65_RS06690	0.54	+0.7
1,386,881	+		DZA65_RS06690	0.54	+0.5
1,386,881	+		DZA65_RS06690	0.54	+0.5
1,386,881	+		DZA65_RS06690	0.54	-0.4
1,386,881	+		DZA65_RS06690	0.54	+0.1
1,386,881	+		DZA65_RS06690	0.54	-0.2
1,386,881	+		DZA65_RS06690	0.54	+0.4
1,386,881	+		DZA65_RS06690	0.54	-0.3
1,386,881	+		DZA65_RS06690	0.54	-0.1
1,386,881	+		DZA65_RS06690	0.54	-0.1
1,386,881	+		DZA65_RS06690	0.54	-0.2
1,386,881	+		DZA65_RS06690	0.54	-0.7
1,386,882	-		DZA65_RS06690	0.54	-0.3
1,386,882	-		DZA65_RS06690	0.54	-0.1
1,386,882	-		DZA65_RS06690	0.54	-0.4
1,386,882	-		DZA65_RS06690	0.54	-0.5
1,386,882	-		DZA65_RS06690	0.54	+0.5
1,386,882	-		DZA65_RS06690	0.54	+0.7
1,386,882	-		DZA65_RS06690	0.54	-0.7
1,386,882	-		DZA65_RS06690	0.54	-0.4
1,386,882	-		DZA65_RS06690	0.54	+1.4
1,386,882	-		DZA65_RS06690	0.54	+1.9
1,386,882	-		DZA65_RS06690	0.54	+0.1
1,386,882	-		DZA65_RS06690	0.54	+0.7
1,386,882	-		DZA65_RS06690	0.54	-0.6