Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03660 and DZA65_RS03665 are separated by 248 nucleotides DZA65_RS03665 and DZA65_RS03670 are separated by 255 nucleotides
DZA65_RS03660: DZA65_RS03660 - sugar ABC transporter permease, at 770,402 to 771,292
_RS03660
DZA65_RS03665: DZA65_RS03665 - TOBE domain-containing protein, at 771,541 to 771,969
_RS03665
DZA65_RS03670: DZA65_RS03670 - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 772,225 to 773,145
_RS03670
Position (kb) 771
772 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 770.541 kb on + strand, within DZA65_RS03660 at 770.541 kb on + strand, within DZA65_RS03660 at 770.541 kb on + strand, within DZA65_RS03660 at 770.541 kb on + strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.542 kb on - strand, within DZA65_RS03660 at 770.616 kb on + strand, within DZA65_RS03660 at 770.616 kb on + strand, within DZA65_RS03660 at 770.616 kb on + strand, within DZA65_RS03660 at 770.616 kb on + strand, within DZA65_RS03660 at 770.616 kb on + strand, within DZA65_RS03660 at 770.617 kb on - strand, within DZA65_RS03660 at 770.617 kb on - strand, within DZA65_RS03660 at 770.617 kb on - strand, within DZA65_RS03660 at 770.632 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.772 kb on + strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.773 kb on - strand, within DZA65_RS03660 at 770.841 kb on + strand at 770.841 kb on + strand, within DZA65_RS03660 at 770.841 kb on + strand, within DZA65_RS03660 at 770.841 kb on + strand, within DZA65_RS03660 at 770.841 kb on + strand, within DZA65_RS03660 at 770.841 kb on + strand, within DZA65_RS03660 at 770.842 kb on - strand, within DZA65_RS03660 at 770.842 kb on - strand, within DZA65_RS03660 at 770.842 kb on - strand, within DZA65_RS03660 at 770.842 kb on - strand, within DZA65_RS03660 at 770.842 kb on - strand, within DZA65_RS03660 at 770.848 kb on + strand, within DZA65_RS03660 at 770.848 kb on + strand, within DZA65_RS03660 at 770.848 kb on + strand, within DZA65_RS03660 at 770.849 kb on - strand, within DZA65_RS03660 at 770.849 kb on - strand, within DZA65_RS03660 at 770.849 kb on - strand, within DZA65_RS03660 at 770.849 kb on - strand, within DZA65_RS03660 at 770.853 kb on - strand, within DZA65_RS03660 at 770.895 kb on + strand, within DZA65_RS03660 at 770.895 kb on + strand, within DZA65_RS03660 at 770.896 kb on - strand, within DZA65_RS03660 at 770.898 kb on + strand, within DZA65_RS03660 at 770.898 kb on + strand, within DZA65_RS03660 at 770.929 kb on + strand, within DZA65_RS03660 at 770.929 kb on + strand, within DZA65_RS03660 at 770.929 kb on + strand, within DZA65_RS03660 at 770.929 kb on + strand, within DZA65_RS03660 at 770.930 kb on - strand, within DZA65_RS03660 at 770.930 kb on - strand, within DZA65_RS03660 at 771.079 kb on + strand, within DZA65_RS03660 at 771.079 kb on + strand, within DZA65_RS03660 at 771.080 kb on - strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.081 kb on + strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.082 kb on - strand, within DZA65_RS03660 at 771.092 kb on - strand, within DZA65_RS03660 at 771.179 kb on - strand, within DZA65_RS03660 at 771.202 kb on - strand, within DZA65_RS03660 at 771.225 kb on + strand at 771.225 kb on + strand at 771.298 kb on + strand at 771.298 kb on + strand at 771.298 kb on + strand at 771.330 kb on - strand at 771.342 kb on - strand at 771.342 kb on - strand at 771.342 kb on - strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.371 kb on + strand at 771.371 kb on + strand at 771.372 kb on - strand at 771.421 kb on + strand at 771.422 kb on - strand at 771.422 kb on - strand at 771.426 kb on + strand at 771.426 kb on + strand at 771.448 kb on + strand at 771.449 kb on - strand at 771.449 kb on - strand at 771.492 kb on - strand at 771.492 kb on - strand at 771.493 kb on + strand at 771.493 kb on + strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.497 kb on + strand at 771.497 kb on + strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.511 kb on - strand at 771.526 kb on + strand at 771.527 kb on - strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.620 kb on + strand at 771.648 kb on + strand, within DZA65_RS03665 at 771.834 kb on + strand, within DZA65_RS03665 at 771.835 kb on - strand, within DZA65_RS03665 at 771.835 kb on - strand, within DZA65_RS03665 at 771.887 kb on + strand, within DZA65_RS03665 at 771.888 kb on - strand, within DZA65_RS03665 at 772.008 kb on + strand at 772.008 kb on + strand at 772.009 kb on - strand at 772.009 kb on - strand at 772.096 kb on + strand at 772.096 kb on + strand at 772.097 kb on - strand at 772.097 kb on - strand at 772.180 kb on + strand at 772.180 kb on + strand at 772.180 kb on + strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.188 kb on + strand at 772.370 kb on - strand, within DZA65_RS03670 at 772.550 kb on + strand, within DZA65_RS03670 at 772.620 kb on + strand, within DZA65_RS03670 at 772.620 kb on + strand, within DZA65_RS03670 at 772.621 kb on - strand, within DZA65_RS03670 at 772.621 kb on - strand, within DZA65_RS03670 at 772.695 kb on + strand, within DZA65_RS03670 at 772.695 kb on + strand, within DZA65_RS03670 at 772.696 kb on - strand, within DZA65_RS03670 at 772.899 kb on + strand, within DZA65_RS03670
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 770,541 + DZA65_RS03660 0.16 +0.2 770,541 + DZA65_RS03660 0.16 -1.2 770,541 + DZA65_RS03660 0.16 -0.0 770,541 + DZA65_RS03660 0.16 -0.9 770,542 - DZA65_RS03660 0.16 +2.1 770,542 - DZA65_RS03660 0.16 +0.9 770,542 - DZA65_RS03660 0.16 -0.5 770,542 - DZA65_RS03660 0.16 -0.6 770,542 - DZA65_RS03660 0.16 -1.1 770,542 - DZA65_RS03660 0.16 -0.1 770,616 + DZA65_RS03660 0.24 -1.2 770,616 + DZA65_RS03660 0.24 +0.4 770,616 + DZA65_RS03660 0.24 +0.7 770,616 + DZA65_RS03660 0.24 -1.9 770,616 + DZA65_RS03660 0.24 -0.5 770,617 - DZA65_RS03660 0.24 -0.8 770,617 - DZA65_RS03660 0.24 +1.1 770,617 - DZA65_RS03660 0.24 -0.5 770,632 + DZA65_RS03660 0.26 -1.5 770,772 + DZA65_RS03660 0.42 +0.4 770,772 + DZA65_RS03660 0.42 -1.6 770,772 + DZA65_RS03660 0.42 +0.4 770,772 + DZA65_RS03660 0.42 -1.1 770,772 + DZA65_RS03660 0.42 -1.3 770,772 + DZA65_RS03660 0.42 +2.3 770,772 + DZA65_RS03660 0.42 +1.6 770,772 + DZA65_RS03660 0.42 -0.2 770,772 + DZA65_RS03660 0.42 +0.7 770,772 + DZA65_RS03660 0.42 +0.4 770,772 + DZA65_RS03660 0.42 +0.7 770,772 + DZA65_RS03660 0.42 -0.5 770,772 + DZA65_RS03660 0.42 -0.5 770,772 + DZA65_RS03660 0.42 +0.3 770,772 + DZA65_RS03660 0.42 +0.1 770,772 + DZA65_RS03660 0.42 +0.0 770,772 + DZA65_RS03660 0.42 +0.3 770,772 + DZA65_RS03660 0.42 -0.8 770,773 - DZA65_RS03660 0.42 +0.9 770,773 - DZA65_RS03660 0.42 -0.5 770,773 - DZA65_RS03660 0.42 -1.3 770,773 - DZA65_RS03660 0.42 -0.5 770,773 - DZA65_RS03660 0.42 +0.2 770,773 - DZA65_RS03660 0.42 -0.6 770,773 - DZA65_RS03660 0.42 +0.2 770,773 - DZA65_RS03660 0.42 +0.2 770,773 - DZA65_RS03660 0.42 -1.0 770,773 - DZA65_RS03660 0.42 -2.0 770,773 - DZA65_RS03660 0.42 +0.2 770,773 - DZA65_RS03660 0.42 +1.0 770,773 - DZA65_RS03660 0.42 -0.2 770,773 - DZA65_RS03660 0.42 +0.5 770,773 - DZA65_RS03660 0.42 -0.1 770,773 - DZA65_RS03660 0.42 -1.2 770,773 - DZA65_RS03660 0.42 +0.3 770,773 - DZA65_RS03660 0.42 +0.1 770,841 + -0.2 770,841 + DZA65_RS03660 0.49 +0.4 770,841 + DZA65_RS03660 0.49 -0.9 770,841 + DZA65_RS03660 0.49 -0.3 770,841 + DZA65_RS03660 0.49 -0.3 770,841 + DZA65_RS03660 0.49 -1.3 770,842 - DZA65_RS03660 0.49 -0.2 770,842 - DZA65_RS03660 0.49 -2.0 770,842 - DZA65_RS03660 0.49 +0.5 770,842 - DZA65_RS03660 0.49 +0.0 770,842 - DZA65_RS03660 0.49 +0.1 770,848 + DZA65_RS03660 0.50 -0.3 770,848 + DZA65_RS03660 0.50 +1.0 770,848 + DZA65_RS03660 0.50 -0.3 770,849 - DZA65_RS03660 0.50 -1.6 770,849 - DZA65_RS03660 0.50 +0.1 770,849 - DZA65_RS03660 0.50 -0.3 770,849 - DZA65_RS03660 0.50 +0.7 770,853 - DZA65_RS03660 0.51 +0.4 770,895 + DZA65_RS03660 0.55 -0.9 770,895 + DZA65_RS03660 0.55 -0.2 770,896 - DZA65_RS03660 0.55 -0.3 770,898 + DZA65_RS03660 0.56 +0.2 770,898 + DZA65_RS03660 0.56 +1.0 770,929 + DZA65_RS03660 0.59 +1.3 770,929 + DZA65_RS03660 0.59 +0.1 770,929 + DZA65_RS03660 0.59 +0.9 770,929 + DZA65_RS03660 0.59 +1.1 770,930 - DZA65_RS03660 0.59 -0.6 770,930 - DZA65_RS03660 0.59 -1.2 771,079 + DZA65_RS03660 0.76 +0.6 771,079 + DZA65_RS03660 0.76 -0.6 771,080 - DZA65_RS03660 0.76 +0.2 771,081 + DZA65_RS03660 0.76 -0.3 771,081 + DZA65_RS03660 0.76 +0.6 771,081 + DZA65_RS03660 0.76 -0.1 771,081 + DZA65_RS03660 0.76 -0.4 771,081 + DZA65_RS03660 0.76 +0.1 771,081 + DZA65_RS03660 0.76 +0.1 771,081 + DZA65_RS03660 0.76 +0.1 771,081 + DZA65_RS03660 0.76 +0.1 771,081 + DZA65_RS03660 0.76 +0.2 771,081 + DZA65_RS03660 0.76 +0.8 771,081 + DZA65_RS03660 0.76 -0.6 771,081 + DZA65_RS03660 0.76 -0.3 771,082 - DZA65_RS03660 0.76 -0.5 771,082 - DZA65_RS03660 0.76 +1.0 771,082 - DZA65_RS03660 0.76 +0.2 771,082 - DZA65_RS03660 0.76 -0.9 771,082 - DZA65_RS03660 0.76 +0.0 771,082 - DZA65_RS03660 0.76 +0.8 771,082 - DZA65_RS03660 0.76 -0.5 771,082 - DZA65_RS03660 0.76 -1.0 771,082 - DZA65_RS03660 0.76 +0.5 771,082 - DZA65_RS03660 0.76 +0.1 771,082 - DZA65_RS03660 0.76 +1.1 771,082 - DZA65_RS03660 0.76 -1.1 771,082 - DZA65_RS03660 0.76 +0.5 771,082 - DZA65_RS03660 0.76 -0.2 771,082 - DZA65_RS03660 0.76 +0.3 771,082 - DZA65_RS03660 0.76 +1.7 771,092 - DZA65_RS03660 0.77 -0.1 771,179 - DZA65_RS03660 0.87 +0.6 771,202 - DZA65_RS03660 0.90 -0.3 771,225 + -0.4 771,225 + -2.2 771,298 + -0.5 771,298 + -1.2 771,298 + +0.3 771,330 - +0.9 771,342 - -1.3 771,342 - +0.6 771,342 - +1.3 771,355 + -2.0 771,355 + -0.1 771,355 + -0.7 771,355 + +1.9 771,355 + +0.9 771,356 - +0.6 771,356 - -0.2 771,356 - -1.7 771,356 - +0.1 771,356 - +0.4 771,356 - -0.0 771,371 + -1.0 771,371 + -0.5 771,372 - +1.4 771,421 + -1.7 771,422 - +0.1 771,422 - -1.0 771,426 + -0.4 771,426 + -0.6 771,448 + +0.2 771,449 - -1.9 771,449 - +0.3 771,492 - +0.5 771,492 - +0.9 771,493 + +0.1 771,493 + +0.7 771,494 - -0.3 771,494 - +0.6 771,494 - +0.1 771,494 - +0.1 771,497 + -1.1 771,497 + -0.6 771,498 - -0.5 771,498 - -0.0 771,498 - -0.3 771,498 - -0.5 771,511 - +0.4 771,526 + -0.5 771,527 - +0.8 771,540 + +0.3 771,540 + -0.1 771,540 + +0.3 771,540 + +2.0 771,540 + +0.6 771,540 + -0.0 771,540 + +0.4 771,540 + -0.4 771,541 - +0.5 771,541 - -0.7 771,541 - +0.7 771,541 - -0.1 771,541 - +1.5 771,541 - -0.6 771,541 - +0.8 771,541 - +1.1 771,541 - +0.0 771,541 - -0.6 771,620 + +1.9 771,648 + DZA65_RS03665 0.25 +0.2 771,834 + DZA65_RS03665 0.68 -1.2 771,835 - DZA65_RS03665 0.69 -2.0 771,835 - DZA65_RS03665 0.69 -1.2 771,887 + DZA65_RS03665 0.81 -0.4 771,888 - DZA65_RS03665 0.81 -0.6 772,008 + +0.2 772,008 + +0.9 772,009 - +0.1 772,009 - -0.3 772,096 + -0.5 772,096 + +1.5 772,097 - +0.1 772,097 - +0.5 772,180 + -0.0 772,180 + -1.0 772,180 + -0.4 772,181 - -0.8 772,181 - +0.8 772,181 - +0.1 772,181 - +1.4 772,181 - -1.0 772,181 - +3.0 772,188 + -0.2 772,370 - DZA65_RS03670 0.16 -0.2 772,550 + DZA65_RS03670 0.35 -1.2 772,620 + DZA65_RS03670 0.43 +0.1 772,620 + DZA65_RS03670 0.43 -0.9 772,621 - DZA65_RS03670 0.43 -1.6 772,621 - DZA65_RS03670 0.43 +1.1 772,695 + DZA65_RS03670 0.51 +0.6 772,695 + DZA65_RS03670 0.51 +0.6 772,696 - DZA65_RS03670 0.51 -0.8 772,899 + DZA65_RS03670 0.73 +1.0
Or see this region's nucleotide sequence