Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02785 and DZA65_RS02790 are separated by 138 nucleotides DZA65_RS02790 and DZA65_RS22800 overlap by 14 nucleotides
DZA65_RS02785: DZA65_RS02785 - DUF87 domain-containing protein, at 600,180 to 601,541
_RS02785
DZA65_RS02790: DZA65_RS02790 - DUF4868 domain-containing protein, at 601,680 to 602,630
_RS02790
DZA65_RS22800: DZA65_RS22800 - hypothetical protein, at 602,617 to 603,207
_RS22800
Position (kb) 601
602
603 Strain fitness (log2 ratio) -2
-1
0
1 at 600.791 kb on + strand, within DZA65_RS02785 at 600.830 kb on + strand at 600.835 kb on + strand, within DZA65_RS02785 at 600.836 kb on - strand, within DZA65_RS02785 at 600.912 kb on - strand, within DZA65_RS02785 at 600.930 kb on - strand, within DZA65_RS02785 at 600.961 kb on + strand, within DZA65_RS02785 at 600.962 kb on - strand, within DZA65_RS02785 at 601.102 kb on - strand, within DZA65_RS02785 at 601.102 kb on - strand, within DZA65_RS02785 at 601.166 kb on - strand, within DZA65_RS02785 at 601.166 kb on - strand, within DZA65_RS02785 at 601.170 kb on - strand, within DZA65_RS02785 at 601.244 kb on - strand, within DZA65_RS02785 at 601.352 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.376 kb on - strand, within DZA65_RS02785 at 601.376 kb on - strand, within DZA65_RS02785 at 601.683 kb on + strand at 602.002 kb on - strand, within DZA65_RS02790 at 602.092 kb on + strand, within DZA65_RS02790 at 602.092 kb on + strand, within DZA65_RS02790 at 602.109 kb on + strand, within DZA65_RS02790 at 602.110 kb on - strand, within DZA65_RS02790 at 602.217 kb on - strand, within DZA65_RS02790 at 602.297 kb on - strand, within DZA65_RS02790 at 602.370 kb on - strand, within DZA65_RS02790 at 602.462 kb on - strand, within DZA65_RS02790 at 602.513 kb on + strand, within DZA65_RS02790 at 602.515 kb on + strand, within DZA65_RS02790 at 602.516 kb on - strand, within DZA65_RS02790 at 602.516 kb on - strand, within DZA65_RS02790 at 602.591 kb on + strand at 602.668 kb on + strand at 602.669 kb on - strand at 602.671 kb on - strand at 602.672 kb on + strand at 602.673 kb on - strand at 602.674 kb on + strand at 602.675 kb on - strand at 602.719 kb on - strand, within DZA65_RS22800 at 602.776 kb on - strand, within DZA65_RS22800 at 602.790 kb on + strand, within DZA65_RS22800 at 602.790 kb on + strand, within DZA65_RS22800 at 602.791 kb on - strand, within DZA65_RS22800 at 602.791 kb on - strand, within DZA65_RS22800 at 602.793 kb on - strand, within DZA65_RS22800 at 602.793 kb on - strand, within DZA65_RS22800 at 602.930 kb on + strand, within DZA65_RS22800 at 602.930 kb on + strand, within DZA65_RS22800 at 602.935 kb on + strand, within DZA65_RS22800 at 602.940 kb on + strand, within DZA65_RS22800 at 602.953 kb on - strand, within DZA65_RS22800 at 603.146 kb on + strand, within DZA65_RS22800 at 603.147 kb on - strand, within DZA65_RS22800 at 603.166 kb on + strand at 603.185 kb on - strand at 603.245 kb on - strand at 603.247 kb on + strand at 603.288 kb on + strand at 603.293 kb on - strand at 603.367 kb on + strand at 603.394 kb on + strand at 603.395 kb on - strand at 603.395 kb on - strand at 603.442 kb on + strand at 603.450 kb on - strand at 603.506 kb on - strand at 603.527 kb on - strand at 603.527 kb on - strand at 603.616 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 600,791 + DZA65_RS02785 0.45 -0.7 600,830 + -0.1 600,835 + DZA65_RS02785 0.48 +1.2 600,836 - DZA65_RS02785 0.48 +0.3 600,912 - DZA65_RS02785 0.54 -0.5 600,930 - DZA65_RS02785 0.55 +0.0 600,961 + DZA65_RS02785 0.57 +0.5 600,962 - DZA65_RS02785 0.57 -0.4 601,102 - DZA65_RS02785 0.68 +1.2 601,102 - DZA65_RS02785 0.68 -0.5 601,166 - DZA65_RS02785 0.72 -0.1 601,166 - DZA65_RS02785 0.72 +0.5 601,170 - DZA65_RS02785 0.73 -0.6 601,244 - DZA65_RS02785 0.78 +1.5 601,352 + DZA65_RS02785 0.86 -1.0 601,375 + DZA65_RS02785 0.88 -0.4 601,375 + DZA65_RS02785 0.88 +0.3 601,375 + DZA65_RS02785 0.88 -0.1 601,376 - DZA65_RS02785 0.88 +1.2 601,376 - DZA65_RS02785 0.88 -1.0 601,683 + -0.6 602,002 - DZA65_RS02790 0.34 -0.1 602,092 + DZA65_RS02790 0.43 +0.5 602,092 + DZA65_RS02790 0.43 -0.5 602,109 + DZA65_RS02790 0.45 -0.8 602,110 - DZA65_RS02790 0.45 -2.1 602,217 - DZA65_RS02790 0.56 -0.8 602,297 - DZA65_RS02790 0.65 -0.2 602,370 - DZA65_RS02790 0.73 -0.9 602,462 - DZA65_RS02790 0.82 -0.4 602,513 + DZA65_RS02790 0.88 -1.7 602,515 + DZA65_RS02790 0.88 -1.3 602,516 - DZA65_RS02790 0.88 -0.6 602,516 - DZA65_RS02790 0.88 +0.7 602,591 + -1.6 602,668 + +0.7 602,669 - -0.7 602,671 - -0.1 602,672 + -0.1 602,673 - +0.4 602,674 + -0.9 602,675 - -1.6 602,719 - DZA65_RS22800 0.17 -1.1 602,776 - DZA65_RS22800 0.27 +1.0 602,790 + DZA65_RS22800 0.29 +0.3 602,790 + DZA65_RS22800 0.29 +1.6 602,791 - DZA65_RS22800 0.29 +0.1 602,791 - DZA65_RS22800 0.29 +0.3 602,793 - DZA65_RS22800 0.30 +1.3 602,793 - DZA65_RS22800 0.30 -0.6 602,930 + DZA65_RS22800 0.53 -0.3 602,930 + DZA65_RS22800 0.53 -0.3 602,935 + DZA65_RS22800 0.54 +0.3 602,940 + DZA65_RS22800 0.55 -0.2 602,953 - DZA65_RS22800 0.57 +0.4 603,146 + DZA65_RS22800 0.90 -0.7 603,147 - DZA65_RS22800 0.90 +0.4 603,166 + -0.1 603,185 - -0.4 603,245 - +1.3 603,247 + +0.3 603,288 + +0.5 603,293 - +0.5 603,367 + -2.0 603,394 + -1.4 603,395 - +0.5 603,395 - +0.7 603,442 + +0.2 603,450 - -0.2 603,506 - +0.7 603,527 - -0.1 603,527 - -0.4 603,616 - +1.0
Or see this region's nucleotide sequence