Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02430 and DZA65_RS02435 are separated by 218 nucleotides DZA65_RS02435 and DZA65_RS02445 are separated by 769 nucleotides
DZA65_RS02430: DZA65_RS02430 - ABC transporter substrate-binding protein, at 523,919 to 525,547
_RS02430
DZA65_RS02435: DZA65_RS02435 - DUF1440 domain-containing protein, at 525,766 to 526,308
_RS02435
DZA65_RS02445: DZA65_RS02445 - FAD-dependent 2-octaprenylphenol hydroxylase, at 527,078 to 528,289
_RS02445
Position (kb) 525
526
527 Strain fitness (log2 ratio) -2
-1
0
1
2 at 524.766 kb on - strand, within DZA65_RS02430 at 524.766 kb on - strand, within DZA65_RS02430 at 524.814 kb on + strand, within DZA65_RS02430 at 524.814 kb on + strand, within DZA65_RS02430 at 524.815 kb on - strand, within DZA65_RS02430 at 524.815 kb on - strand, within DZA65_RS02430 at 524.815 kb on - strand, within DZA65_RS02430 at 524.838 kb on + strand, within DZA65_RS02430 at 524.839 kb on - strand, within DZA65_RS02430 at 524.839 kb on - strand, within DZA65_RS02430 at 524.862 kb on + strand, within DZA65_RS02430 at 524.880 kb on + strand, within DZA65_RS02430 at 524.881 kb on - strand, within DZA65_RS02430 at 524.988 kb on + strand, within DZA65_RS02430 at 524.988 kb on + strand, within DZA65_RS02430 at 524.988 kb on + strand, within DZA65_RS02430 at 524.989 kb on - strand, within DZA65_RS02430 at 524.989 kb on - strand, within DZA65_RS02430 at 525.008 kb on + strand, within DZA65_RS02430 at 525.008 kb on + strand, within DZA65_RS02430 at 525.008 kb on + strand, within DZA65_RS02430 at 525.009 kb on - strand, within DZA65_RS02430 at 525.012 kb on + strand, within DZA65_RS02430 at 525.012 kb on + strand, within DZA65_RS02430 at 525.012 kb on + strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.013 kb on - strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.055 kb on + strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.056 kb on - strand, within DZA65_RS02430 at 525.057 kb on + strand, within DZA65_RS02430 at 525.057 kb on + strand, within DZA65_RS02430 at 525.057 kb on + strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.058 kb on - strand, within DZA65_RS02430 at 525.094 kb on + strand, within DZA65_RS02430 at 525.094 kb on + strand, within DZA65_RS02430 at 525.094 kb on + strand, within DZA65_RS02430 at 525.094 kb on + strand, within DZA65_RS02430 at 525.094 kb on + strand, within DZA65_RS02430 at 525.095 kb on - strand, within DZA65_RS02430 at 525.095 kb on - strand, within DZA65_RS02430 at 525.095 kb on - strand, within DZA65_RS02430 at 525.127 kb on - strand, within DZA65_RS02430 at 525.154 kb on + strand, within DZA65_RS02430 at 525.154 kb on + strand, within DZA65_RS02430 at 525.155 kb on - strand, within DZA65_RS02430 at 525.155 kb on - strand, within DZA65_RS02430 at 525.155 kb on - strand, within DZA65_RS02430 at 525.168 kb on + strand, within DZA65_RS02430 at 525.168 kb on + strand, within DZA65_RS02430 at 525.169 kb on - strand, within DZA65_RS02430 at 525.169 kb on - strand, within DZA65_RS02430 at 525.169 kb on - strand, within DZA65_RS02430 at 525.235 kb on + strand, within DZA65_RS02430 at 525.235 kb on + strand, within DZA65_RS02430 at 525.235 kb on + strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.236 kb on - strand, within DZA65_RS02430 at 525.237 kb on + strand, within DZA65_RS02430 at 525.238 kb on - strand, within DZA65_RS02430 at 525.238 kb on - strand at 525.238 kb on - strand, within DZA65_RS02430 at 525.238 kb on - strand, within DZA65_RS02430 at 525.286 kb on + strand, within DZA65_RS02430 at 525.357 kb on + strand, within DZA65_RS02430 at 525.504 kb on - strand at 525.504 kb on - strand at 525.566 kb on + strand at 525.566 kb on + strand at 525.567 kb on - strand at 525.571 kb on + strand at 525.571 kb on + strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.572 kb on - strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.574 kb on + strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.575 kb on - strand at 525.577 kb on + strand at 525.577 kb on + strand at 525.578 kb on - strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.586 kb on + strand at 525.587 kb on - strand at 525.587 kb on - strand at 525.587 kb on - strand at 525.587 kb on - strand at 525.587 kb on - strand at 525.587 kb on - strand at 525.592 kb on + strand at 525.592 kb on + strand at 525.593 kb on - strand at 525.600 kb on + strand at 525.600 kb on + strand at 525.601 kb on - strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.606 kb on - strand at 525.606 kb on - strand at 525.655 kb on + strand at 525.663 kb on + strand at 525.665 kb on + strand at 525.666 kb on - strand at 525.666 kb on - strand at 525.683 kb on - strand at 525.683 kb on - strand at 525.699 kb on + strand at 525.699 kb on + strand at 525.699 kb on + strand at 525.699 kb on + strand at 525.700 kb on - strand at 525.700 kb on - strand at 525.700 kb on - strand at 525.712 kb on + strand at 525.713 kb on - strand at 525.713 kb on - strand at 525.713 kb on - strand at 525.713 kb on - strand at 525.713 kb on - strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.741 kb on + strand at 525.742 kb on - strand at 525.742 kb on - strand at 525.783 kb on + strand at 525.783 kb on + strand at 525.784 kb on - strand at 525.784 kb on - strand at 525.797 kb on + strand at 525.797 kb on + strand at 525.797 kb on + strand at 525.797 kb on + strand at 525.797 kb on + strand at 525.797 kb on + strand at 525.798 kb on - strand at 525.798 kb on - strand at 525.798 kb on - strand at 526.027 kb on + strand, within DZA65_RS02435 at 526.028 kb on - strand, within DZA65_RS02435 at 526.034 kb on + strand, within DZA65_RS02435 at 526.034 kb on + strand, within DZA65_RS02435 at 526.035 kb on - strand, within DZA65_RS02435 at 526.044 kb on + strand, within DZA65_RS02435 at 526.051 kb on - strand at 526.112 kb on + strand, within DZA65_RS02435 at 526.112 kb on + strand, within DZA65_RS02435 at 526.112 kb on + strand, within DZA65_RS02435 at 526.112 kb on + strand, within DZA65_RS02435 at 526.112 kb on + strand, within DZA65_RS02435 at 526.112 kb on + strand, within DZA65_RS02435 at 526.113 kb on - strand, within DZA65_RS02435 at 526.113 kb on - strand, within DZA65_RS02435 at 526.113 kb on - strand, within DZA65_RS02435 at 526.156 kb on + strand, within DZA65_RS02435 at 526.156 kb on + strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.157 kb on - strand, within DZA65_RS02435 at 526.255 kb on - strand at 526.276 kb on + strand at 526.503 kb on + strand at 526.506 kb on + strand at 526.507 kb on - strand at 526.573 kb on + strand at 526.577 kb on + strand at 526.591 kb on - strand at 526.599 kb on + strand at 526.600 kb on - strand at 526.644 kb on + strand at 526.702 kb on - strand at 526.802 kb on + strand at 526.803 kb on - strand at 526.830 kb on - strand at 526.831 kb on + strand at 526.831 kb on + strand at 526.831 kb on + strand at 526.832 kb on - strand at 526.922 kb on + strand at 526.923 kb on - strand at 526.923 kb on - strand at 526.923 kb on - strand at 526.923 kb on - strand at 526.923 kb on - strand at 526.924 kb on + strand at 526.925 kb on - strand at 526.967 kb on + strand at 526.967 kb on + strand at 526.967 kb on + strand at 526.967 kb on + strand at 526.968 kb on - strand at 526.969 kb on + strand at 526.969 kb on + strand at 526.969 kb on + strand at 526.969 kb on + strand at 526.969 kb on + strand at 526.970 kb on - strand at 526.970 kb on - strand at 526.973 kb on + strand at 526.973 kb on + strand at 526.973 kb on + strand at 526.973 kb on + strand at 526.974 kb on - strand at 526.974 kb on - strand at 526.974 kb on - strand at 526.995 kb on + strand at 526.996 kb on - strand at 527.010 kb on + strand at 527.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 524,766 - DZA65_RS02430 0.52 -0.6 524,766 - DZA65_RS02430 0.52 +0.1 524,814 + DZA65_RS02430 0.55 +1.0 524,814 + DZA65_RS02430 0.55 +0.1 524,815 - DZA65_RS02430 0.55 -0.2 524,815 - DZA65_RS02430 0.55 +1.1 524,815 - DZA65_RS02430 0.55 +0.6 524,838 + DZA65_RS02430 0.56 -0.4 524,839 - DZA65_RS02430 0.56 +0.2 524,839 - DZA65_RS02430 0.56 -1.4 524,862 + DZA65_RS02430 0.58 -0.2 524,880 + DZA65_RS02430 0.59 +0.3 524,881 - DZA65_RS02430 0.59 -0.0 524,988 + DZA65_RS02430 0.66 -0.5 524,988 + DZA65_RS02430 0.66 -1.3 524,988 + DZA65_RS02430 0.66 +2.0 524,989 - DZA65_RS02430 0.66 -1.2 524,989 - DZA65_RS02430 0.66 -0.9 525,008 + DZA65_RS02430 0.67 +0.9 525,008 + DZA65_RS02430 0.67 -0.2 525,008 + DZA65_RS02430 0.67 -0.6 525,009 - DZA65_RS02430 0.67 +0.8 525,012 + DZA65_RS02430 0.67 -0.6 525,012 + DZA65_RS02430 0.67 -0.1 525,012 + DZA65_RS02430 0.67 +0.5 525,013 - DZA65_RS02430 0.67 -0.5 525,013 - DZA65_RS02430 0.67 -0.6 525,013 - DZA65_RS02430 0.67 +0.2 525,013 - DZA65_RS02430 0.67 +0.3 525,013 - DZA65_RS02430 0.67 -0.2 525,013 - DZA65_RS02430 0.67 -0.0 525,055 + DZA65_RS02430 0.70 -0.3 525,055 + DZA65_RS02430 0.70 -0.4 525,055 + DZA65_RS02430 0.70 -0.1 525,055 + DZA65_RS02430 0.70 -0.8 525,055 + DZA65_RS02430 0.70 +0.0 525,055 + DZA65_RS02430 0.70 +0.0 525,055 + DZA65_RS02430 0.70 +1.1 525,055 + DZA65_RS02430 0.70 -0.8 525,056 - DZA65_RS02430 0.70 -0.5 525,056 - DZA65_RS02430 0.70 -1.8 525,056 - DZA65_RS02430 0.70 -0.4 525,056 - DZA65_RS02430 0.70 -0.4 525,056 - DZA65_RS02430 0.70 +0.0 525,056 - DZA65_RS02430 0.70 +1.1 525,057 + DZA65_RS02430 0.70 +0.2 525,057 + DZA65_RS02430 0.70 -0.5 525,057 + DZA65_RS02430 0.70 +0.2 525,058 - DZA65_RS02430 0.70 -0.5 525,058 - DZA65_RS02430 0.70 -0.0 525,058 - DZA65_RS02430 0.70 +0.2 525,058 - DZA65_RS02430 0.70 -0.4 525,058 - DZA65_RS02430 0.70 -0.7 525,058 - DZA65_RS02430 0.70 +0.2 525,094 + DZA65_RS02430 0.72 -0.4 525,094 + DZA65_RS02430 0.72 -0.2 525,094 + DZA65_RS02430 0.72 -0.5 525,094 + DZA65_RS02430 0.72 -0.2 525,094 + DZA65_RS02430 0.72 -0.4 525,095 - DZA65_RS02430 0.72 -0.4 525,095 - DZA65_RS02430 0.72 +0.5 525,095 - DZA65_RS02430 0.72 -0.0 525,127 - DZA65_RS02430 0.74 -0.5 525,154 + DZA65_RS02430 0.76 +2.0 525,154 + DZA65_RS02430 0.76 -0.8 525,155 - DZA65_RS02430 0.76 -0.4 525,155 - DZA65_RS02430 0.76 -1.4 525,155 - DZA65_RS02430 0.76 +0.5 525,168 + DZA65_RS02430 0.77 +0.9 525,168 + DZA65_RS02430 0.77 -1.0 525,169 - DZA65_RS02430 0.77 +0.8 525,169 - DZA65_RS02430 0.77 +0.7 525,169 - DZA65_RS02430 0.77 -1.1 525,235 + DZA65_RS02430 0.81 +0.2 525,235 + DZA65_RS02430 0.81 -0.6 525,235 + DZA65_RS02430 0.81 -0.6 525,236 - DZA65_RS02430 0.81 +0.1 525,236 - DZA65_RS02430 0.81 -0.0 525,236 - +0.2 525,236 - DZA65_RS02430 0.81 -0.4 525,236 - DZA65_RS02430 0.81 -1.9 525,236 - DZA65_RS02430 0.81 +0.0 525,236 - DZA65_RS02430 0.81 -0.3 525,236 - DZA65_RS02430 0.81 +1.3 525,236 - DZA65_RS02430 0.81 +0.6 525,237 + DZA65_RS02430 0.81 +0.9 525,238 - DZA65_RS02430 0.81 -0.4 525,238 - +2.1 525,238 - DZA65_RS02430 0.81 -0.7 525,238 - DZA65_RS02430 0.81 -0.6 525,286 + DZA65_RS02430 0.84 +0.6 525,357 + DZA65_RS02430 0.88 -0.3 525,504 - -0.0 525,504 - -0.0 525,566 + +1.2 525,566 + +1.4 525,567 - -0.4 525,571 + -0.2 525,571 + +0.1 525,572 - +0.0 525,572 - -1.6 525,572 - -0.8 525,572 - +0.0 525,572 - +0.1 525,572 - +1.5 525,572 - -0.1 525,572 - +0.4 525,572 - -0.9 525,572 - -0.9 525,572 - -0.2 525,572 - +0.1 525,572 - -1.7 525,572 - -0.1 525,572 - +0.3 525,572 - -0.1 525,574 + +0.0 525,574 + -0.5 525,574 + -2.6 525,574 + -0.8 525,574 + -1.7 525,574 + +0.1 525,574 + -0.2 525,574 + -0.5 525,574 + -0.1 525,574 + -1.6 525,574 + -0.4 525,574 + +1.2 525,574 + -1.1 525,574 + +1.6 525,574 + +0.7 525,575 - -1.3 525,575 - +1.2 525,575 - -0.4 525,575 - -1.1 525,575 - -0.8 525,575 - +0.5 525,575 - -0.5 525,575 - -0.5 525,575 - +0.4 525,575 - +0.4 525,575 - +1.2 525,575 - -0.6 525,575 - -0.2 525,575 - +0.2 525,575 - -0.0 525,575 - +0.1 525,577 + +1.4 525,577 + -0.4 525,578 - +0.3 525,586 + -0.5 525,586 + +0.2 525,586 + +0.0 525,586 + +1.2 525,586 + +0.9 525,586 + +0.2 525,586 + +0.8 525,586 + +0.2 525,586 + +0.8 525,586 + +0.2 525,587 - -0.2 525,587 - -0.6 525,587 - -1.2 525,587 - +0.0 525,587 - +0.6 525,587 - -0.1 525,592 + +0.3 525,592 + -0.2 525,593 - -0.3 525,600 + -0.1 525,600 + +1.2 525,601 - -0.1 525,605 + +0.2 525,605 + +0.5 525,605 + -0.6 525,605 + -0.9 525,605 + -0.8 525,606 - +0.2 525,606 - -0.2 525,655 + -0.3 525,663 + +0.3 525,665 + -0.2 525,666 - -0.4 525,666 - +1.2 525,683 - -1.5 525,683 - -0.6 525,699 + -0.6 525,699 + +1.1 525,699 + -1.9 525,699 + +0.7 525,700 - -0.9 525,700 - +0.0 525,700 - -1.2 525,712 + -1.5 525,713 - -0.6 525,713 - -0.3 525,713 - +0.1 525,713 - -0.3 525,713 - +1.5 525,741 + +0.9 525,741 + -0.1 525,741 + -0.5 525,741 + +0.0 525,741 + +0.4 525,741 + -0.5 525,741 + -0.8 525,741 + +1.0 525,741 + -0.9 525,741 + +0.2 525,741 + -0.2 525,742 - +1.2 525,742 - +0.6 525,783 + -0.1 525,783 + +0.6 525,784 - +0.3 525,784 - -1.2 525,797 + -1.9 525,797 + +0.2 525,797 + +0.0 525,797 + -0.4 525,797 + -0.4 525,797 + +1.0 525,798 - +0.4 525,798 - +0.1 525,798 - +0.6 526,027 + DZA65_RS02435 0.48 -0.1 526,028 - DZA65_RS02435 0.48 +0.3 526,034 + DZA65_RS02435 0.49 -0.9 526,034 + DZA65_RS02435 0.49 +0.7 526,035 - DZA65_RS02435 0.50 -0.4 526,044 + DZA65_RS02435 0.51 -0.9 526,051 - +0.8 526,112 + DZA65_RS02435 0.64 -0.0 526,112 + DZA65_RS02435 0.64 +1.2 526,112 + DZA65_RS02435 0.64 -0.5 526,112 + DZA65_RS02435 0.64 +0.0 526,112 + DZA65_RS02435 0.64 +1.4 526,112 + DZA65_RS02435 0.64 +0.5 526,113 - DZA65_RS02435 0.64 -0.3 526,113 - DZA65_RS02435 0.64 +0.6 526,113 - DZA65_RS02435 0.64 +0.8 526,156 + DZA65_RS02435 0.72 -0.6 526,156 + DZA65_RS02435 0.72 +0.1 526,157 - DZA65_RS02435 0.72 +0.5 526,157 - DZA65_RS02435 0.72 -0.1 526,157 - DZA65_RS02435 0.72 +0.9 526,157 - DZA65_RS02435 0.72 -0.0 526,157 - DZA65_RS02435 0.72 +0.4 526,157 - DZA65_RS02435 0.72 +0.6 526,255 - +0.2 526,276 + -1.1 526,503 + +0.6 526,506 + +0.6 526,507 - -0.6 526,573 + -0.3 526,577 + -0.6 526,591 - +0.7 526,599 + +0.5 526,600 - -0.1 526,644 + -0.8 526,702 - -0.9 526,802 + -0.8 526,803 - -0.6 526,830 - -0.5 526,831 + -1.9 526,831 + -0.4 526,831 + +0.3 526,832 - -0.8 526,922 + -0.4 526,923 - +0.6 526,923 - -1.1 526,923 - -0.2 526,923 - +0.0 526,923 - +0.6 526,924 + -0.2 526,925 - +1.2 526,967 + +1.0 526,967 + +0.0 526,967 + -0.9 526,967 + -0.8 526,968 - -0.4 526,969 + -0.5 526,969 + -0.0 526,969 + +0.1 526,969 + +0.3 526,969 + -1.8 526,970 - -0.8 526,970 - -0.6 526,973 + -0.6 526,973 + +0.4 526,973 + +0.8 526,973 + +0.0 526,974 - -0.1 526,974 - -0.1 526,974 - +1.7 526,995 + -0.2 526,996 - +0.4 527,010 + -1.2 527,048 - -0.1
Or see this region's nucleotide sequence