Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS20145 and DZA65_RS20150 are separated by 180 nucleotides DZA65_RS20150 and DZA65_RS20155 are separated by 149 nucleotides DZA65_RS20155 and DZA65_RS20160 are separated by 86 nucleotides
DZA65_RS20145: DZA65_RS20145 - tRNA-Gly, at 4,364,743 to 4,364,818
_RS20145
DZA65_RS20150: DZA65_RS20150 - oligoribonuclease, at 4,364,999 to 4,365,541
_RS20150
DZA65_RS20155: DZA65_RS20155 - small ribosomal subunit biogenesis GTPase RsgA, at 4,365,691 to 4,366,740
_RS20155
DZA65_RS20160: DZA65_RS20160 - phosphatidylserine decarboxylase, at 4,366,827 to 4,367,741
_RS20160
Position (kb)
4365
4366
4367 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4364.710 kb on + strand at 4364.711 kb on - strand at 4364.732 kb on + strand at 4364.733 kb on - strand at 4364.733 kb on - strand at 4364.798 kb on + strand, within DZA65_RS20145 at 4364.798 kb on + strand, within DZA65_RS20145 at 4364.810 kb on + strand, within DZA65_RS20145 at 4364.810 kb on + strand, within DZA65_RS20145 at 4364.810 kb on + strand, within DZA65_RS20145 at 4364.810 kb on + strand, within DZA65_RS20145 at 4364.842 kb on + strand at 4364.843 kb on - strand at 4364.843 kb on - strand at 4364.843 kb on - strand at 4364.843 kb on - strand at 4364.869 kb on + strand at 4364.869 kb on + strand at 4364.871 kb on + strand at 4364.872 kb on - strand at 4364.872 kb on - strand at 4365.569 kb on - strand at 4365.616 kb on - strand at 4365.620 kb on - strand at 4365.620 kb on - strand at 4365.629 kb on + strand at 4365.629 kb on + strand at 4365.629 kb on + strand at 4365.629 kb on + strand at 4365.630 kb on - strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.636 kb on + strand at 4365.637 kb on - strand at 4365.637 kb on - strand at 4365.637 kb on - strand at 4365.637 kb on - strand at 4365.637 kb on - strand at 4365.637 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.640 kb on - strand at 4365.641 kb on + strand at 4365.641 kb on + strand at 4365.642 kb on - strand at 4365.642 kb on - strand at 4366.713 kb on + strand at 4366.713 kb on + strand at 4366.714 kb on - strand at 4366.714 kb on - strand at 4366.745 kb on + strand at 4366.745 kb on + strand at 4366.745 kb on + strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.750 kb on + strand at 4366.763 kb on + strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.766 kb on - strand at 4366.766 kb on - strand at 4366.799 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,364,710 + -0.4 4,364,711 - -0.1 4,364,732 + -0.5 4,364,733 - +0.3 4,364,733 - -0.3 4,364,798 + DZA65_RS20145 0.72 -0.7 4,364,798 + DZA65_RS20145 0.72 -0.8 4,364,810 + DZA65_RS20145 0.88 -0.2 4,364,810 + DZA65_RS20145 0.88 -1.7 4,364,810 + DZA65_RS20145 0.88 -1.7 4,364,810 + DZA65_RS20145 0.88 +0.6 4,364,842 + -0.3 4,364,843 - -0.6 4,364,843 - -0.1 4,364,843 - +0.8 4,364,843 - +0.3 4,364,869 + +0.1 4,364,869 + -2.2 4,364,871 + +1.2 4,364,872 - -0.7 4,364,872 - -0.4 4,365,569 - -0.1 4,365,616 - +0.1 4,365,620 - +0.5 4,365,620 - +0.6 4,365,629 + +1.2 4,365,629 + +0.9 4,365,629 + -0.6 4,365,629 + +0.4 4,365,630 - +0.6 4,365,636 + -0.0 4,365,636 + +0.7 4,365,636 + -0.4 4,365,636 + +0.7 4,365,636 + -0.3 4,365,636 + -0.8 4,365,636 + +0.5 4,365,636 + +0.3 4,365,636 + +0.2 4,365,636 + +0.0 4,365,636 + +0.8 4,365,637 - +0.9 4,365,637 - +0.9 4,365,637 - -1.2 4,365,637 - +0.1 4,365,637 - +0.3 4,365,637 - -0.1 4,365,640 - -0.7 4,365,640 - +0.2 4,365,640 - +0.2 4,365,640 - -0.6 4,365,640 - +0.7 4,365,640 - +0.0 4,365,640 - +0.3 4,365,640 - -1.7 4,365,640 - -0.1 4,365,641 + +0.2 4,365,641 + +1.0 4,365,642 - -0.5 4,365,642 - -0.7 4,366,713 + +0.8 4,366,713 + -0.5 4,366,714 - -0.1 4,366,714 - +0.6 4,366,745 + +0.5 4,366,745 + -0.4 4,366,745 + -0.4 4,366,746 - +1.0 4,366,746 - -0.4 4,366,746 - +0.6 4,366,746 - +0.9 4,366,746 - +1.7 4,366,746 - -1.4 4,366,746 - +0.3 4,366,750 + -1.2 4,366,763 + +0.4 4,366,764 - +2.0 4,366,764 - +0.8 4,366,764 - +0.2 4,366,764 - -0.6 4,366,765 + +1.4 4,366,765 + +0.6 4,366,765 + +0.9 4,366,765 + +0.1 4,366,765 + -0.6 4,366,765 + +0.2 4,366,766 - -0.0 4,366,766 - +0.7 4,366,799 + +0.1
Or see this region's nucleotide sequence