Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19155

Experiment: M9+glycerol

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDZA65_RS19150 and DZA65_RS19155 are separated by 19 nucleotidesDZA65_RS19155 and DZA65_RS19160 overlap by 4 nucleotidesDZA65_RS19160 and DZA65_RS19165 are separated by 2 nucleotides DZA65_RS19150: DZA65_RS19150 - peptidoglycan glycosyltransferase FtsI, at 4,140,661 to 4,142,424 _RS19150 DZA65_RS19155: DZA65_RS19155 - cell division protein FtsL, at 4,142,444 to 4,142,767 _RS19155 DZA65_RS19160: DZA65_RS19160 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 4,142,764 to 4,143,705 _RS19160 DZA65_RS19165: DZA65_RS19165 - division/cell wall cluster transcriptional repressor MraZ, at 4,143,708 to 4,144,166 _RS19165 Position (kb) 4142 4143Strain fitness (log2 ratio) -2 -1 0 1at 4142.441 kb on - strandat 4143.073 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.075 kb on - strand, within DZA65_RS19160at 4143.117 kb on - strand, within DZA65_RS19160at 4143.325 kb on - strand, within DZA65_RS19160at 4143.511 kb on - strand, within DZA65_RS19160at 4143.627 kb on - strandat 4143.627 kb on - strandat 4143.627 kb on - strandat 4143.627 kb on - strandat 4143.627 kb on - strandat 4143.627 kb on - strandat 4143.631 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.710 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.712 kb on - strandat 4143.718 kb on - strandat 4143.718 kb on - strandat 4143.718 kb on - strandat 4143.718 kb on - strandat 4143.718 kb on - strandat 4143.739 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9+glycerol
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4,142,441 - +0.3
4,143,073 - DZA65_RS19160 0.33 +0.4
4,143,075 - DZA65_RS19160 0.33 +1.1
4,143,075 - DZA65_RS19160 0.33 -1.1
4,143,075 - DZA65_RS19160 0.33 -0.1
4,143,075 - DZA65_RS19160 0.33 +0.1
4,143,075 - DZA65_RS19160 0.33 +1.1
4,143,075 - DZA65_RS19160 0.33 -0.2
4,143,117 - DZA65_RS19160 0.37 +1.1
4,143,325 - DZA65_RS19160 0.60 -0.1
4,143,511 - DZA65_RS19160 0.79 +1.7
4,143,627 - +0.2
4,143,627 - +0.3
4,143,627 - -0.6
4,143,627 - +0.2
4,143,627 - +0.9
4,143,627 - -1.5
4,143,631 - +0.8
4,143,710 - -0.0
4,143,710 - +0.8
4,143,710 - +0.1
4,143,710 - +0.6
4,143,710 - -0.5
4,143,710 - +0.5
4,143,710 - +0.6
4,143,710 - -1.9
4,143,712 - +0.9
4,143,712 - -0.1
4,143,712 - -1.2
4,143,712 - -2.4
4,143,712 - -1.6
4,143,712 - -0.1
4,143,712 - -0.1
4,143,712 - +0.3
4,143,718 - +1.1
4,143,718 - +0.1
4,143,718 - -0.7
4,143,718 - +1.1
4,143,718 - -0.0
4,143,739 - +0.4

Or see this region's nucleotide sequence