Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18480

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,979,443	+		DZA65_RS18475	0.21	+2.0
3,979,443	+		DZA65_RS18475	0.21	-0.1
3,979,444	-		DZA65_RS18475	0.21	+0.0
3,979,444	-		DZA65_RS18475	0.21	+0.8
3,979,508	-		DZA65_RS18475	0.26	-0.5
3,979,508	-		DZA65_RS18475	0.26	-0.5
3,979,514	+		DZA65_RS18475	0.26	+0.1
3,979,611	-		DZA65_RS18475	0.34	-0.1
3,979,647	+		DZA65_RS18475	0.37	-1.5
3,979,648	-		DZA65_RS18475	0.37	+0.7
3,979,912	+		DZA65_RS18475	0.58	+1.2
3,979,913	-		DZA65_RS18475	0.58	-0.6
3,979,913	-		DZA65_RS18475	0.58	+0.7
3,979,942	+		DZA65_RS18475	0.61	-0.8
3,979,942	+		DZA65_RS18475	0.61	-1.1
3,979,942	+		DZA65_RS18475	0.61	-0.6
3,979,942	+		DZA65_RS18475	0.61	-0.5
3,979,942	+		DZA65_RS18475	0.61	-0.0
3,979,943	-		DZA65_RS18475	0.61	-0.6
3,979,943	-		DZA65_RS18475	0.61	+0.4
3,979,943	-		DZA65_RS18475	0.61	-0.5
3,979,946	+		DZA65_RS18475	0.61	+0.6
3,979,946	+		DZA65_RS18475	0.61	+0.7
3,979,946	+		DZA65_RS18475	0.61	+0.3
3,979,946	+		DZA65_RS18475	0.61	-1.8
3,979,947	-		DZA65_RS18475	0.61	+0.3
3,979,947	-		DZA65_RS18475	0.61	+0.0
3,979,947	-		DZA65_RS18475	0.61	+0.2
3,979,947	-		DZA65_RS18475	0.61	-0.9
3,979,947	-		DZA65_RS18475	0.61	-0.2
3,979,947	-		DZA65_RS18475	0.61	-2.1
3,979,947	-		DZA65_RS18475	0.61	-0.1
3,980,071	+		DZA65_RS18475	0.71	-1.5
3,980,086	+		DZA65_RS18475	0.72	-1.1
3,980,086	+		DZA65_RS18475	0.72	+0.5
3,980,087	-		DZA65_RS18475	0.72	+1.4
3,980,087	-		DZA65_RS18475	0.72	+0.2
3,980,116	+		DZA65_RS18475	0.75	-0.2
3,980,117	-		DZA65_RS18475	0.75	+0.0
3,980,169	+		DZA65_RS18475	0.79	-0.1
3,980,247	-		DZA65_RS18475	0.85	-0.2
3,980,247	-		DZA65_RS18475	0.85	-0.3
3,980,248	+		DZA65_RS18475	0.85	-2.3
3,980,248	+		DZA65_RS18475	0.85	+0.3
3,980,248	+		DZA65_RS18475	0.85	+1.7
3,980,248	+		DZA65_RS18475	0.85	-1.1
3,980,248	+		DZA65_RS18475	0.85	-0.1
3,980,248	+		DZA65_RS18475	0.85	-0.3
3,980,248	+		DZA65_RS18475	0.85	-1.0
3,980,248	+		DZA65_RS18475	0.85	-1.4
3,980,248	+		DZA65_RS18475	0.85	-0.3
3,980,248	+		DZA65_RS18475	0.85	+0.8
3,980,248	+		DZA65_RS18475	0.85	+0.9
3,980,249	-		DZA65_RS18475	0.85	+0.3
3,980,249	-		DZA65_RS18475	0.85	-0.2
3,980,249	-		DZA65_RS18475	0.85	-0.8
3,980,249	-		DZA65_RS18475	0.85	+0.5
3,980,249	-				+0.0
3,980,249	-		DZA65_RS18475	0.85	+2.2
3,980,249	-		DZA65_RS18475	0.85	+0.5
3,980,249	-		DZA65_RS18475	0.85	+0.6
3,980,249	-		DZA65_RS18475	0.85	-0.2
3,980,426	+				+0.0
3,980,426	+				+1.5
3,980,426	+				+0.0
3,980,554	-				+1.0
3,980,644	+				-0.5
3,980,800	+		DZA65_RS18480	0.17	+0.0
3,980,801	-		DZA65_RS18480	0.17	-0.0
3,980,801	-		DZA65_RS18480	0.17	+0.4
3,980,801	-		DZA65_RS18480	0.17	-1.0
3,980,844	+		DZA65_RS18480	0.19	+0.0
3,980,844	+		DZA65_RS18480	0.19	+0.2
3,981,050	+		DZA65_RS18480	0.28	-0.8
3,981,050	+		DZA65_RS18480	0.28	-0.7
3,981,051	-		DZA65_RS18480	0.28	-0.2
3,981,051	-		DZA65_RS18480	0.28	-0.5
3,981,059	-		DZA65_RS18480	0.29	-2.1
3,981,090	+		DZA65_RS18480	0.30	+0.1
3,981,174	+		DZA65_RS18480	0.34	-0.4
3,981,175	-		DZA65_RS18480	0.34	-1.2
3,981,175	-		DZA65_RS18480	0.34	-0.1
3,981,175	-		DZA65_RS18480	0.34	-0.1
3,981,195	+		DZA65_RS18480	0.35	+0.0
3,981,216	+		DZA65_RS18480	0.36	-0.0
3,981,216	+		DZA65_RS18480	0.36	-1.1
3,981,217	-		DZA65_RS18480	0.36	-0.6
3,981,217	-		DZA65_RS18480	0.36	-2.0
3,981,267	+		DZA65_RS18480	0.38	-0.5
3,981,267	+		DZA65_RS18480	0.38	+0.0
3,981,267	+		DZA65_RS18480	0.38	+0.6
3,981,267	+		DZA65_RS18480	0.38	-0.3
3,981,267	+		DZA65_RS18480	0.38	-0.8
3,981,267	+		DZA65_RS18480	0.38	+0.3
3,981,267	+		DZA65_RS18480	0.38	-1.0
3,981,267	+		DZA65_RS18480	0.38	+0.3
3,981,268	-				+1.0
3,981,268	-		DZA65_RS18480	0.38	+1.2
3,981,268	-				-0.5
3,981,268	-		DZA65_RS18480	0.38	+1.0
3,981,268	-		DZA65_RS18480	0.38	-1.5
3,981,292	-		DZA65_RS18480	0.39	+0.6
3,981,547	+		DZA65_RS18480	0.51	-0.1
3,981,547	+		DZA65_RS18480	0.51	-0.1
3,981,627	+		DZA65_RS18480	0.54	-0.9
3,981,628	-		DZA65_RS18480	0.55	+1.3
3,981,628	-		DZA65_RS18480	0.55	-0.2
3,981,637	+		DZA65_RS18480	0.55	-0.2
3,981,637	+		DZA65_RS18480	0.55	+0.5
3,981,637	+		DZA65_RS18480	0.55	-1.5
3,981,638	-		DZA65_RS18480	0.55	+0.6
3,981,712	+		DZA65_RS18480	0.58	+0.6
3,981,762	+		DZA65_RS18480	0.61	+0.5
3,981,762	+		DZA65_RS18480	0.61	-0.1
3,981,762	+		DZA65_RS18480	0.61	-0.5
3,981,762	+		DZA65_RS18480	0.61	-0.4
3,981,763	-		DZA65_RS18480	0.61	-0.5
3,981,763	-		DZA65_RS18480	0.61	-0.1
3,981,884	-		DZA65_RS18480	0.66	-0.1
3,981,884	-		DZA65_RS18480	0.66	-1.3
3,981,884	-		DZA65_RS18480	0.66	+0.3
3,981,921	+		DZA65_RS18480	0.68	-1.8
3,981,921	+		DZA65_RS18480	0.68	-0.4
3,981,921	+		DZA65_RS18480	0.68	+0.5
3,981,922	-		DZA65_RS18480	0.68	-1.9
3,981,967	-		DZA65_RS18480	0.70	-0.0
3,982,002	+		DZA65_RS18480	0.72	-0.9
3,982,002	+		DZA65_RS18480	0.72	-1.8
3,982,002	+		DZA65_RS18480	0.72	+0.8
3,982,270	-		DZA65_RS18480	0.84	-0.1
3,982,297	+		DZA65_RS18480	0.85	-0.1
3,982,298	-		DZA65_RS18480	0.85	+0.6
3,982,300	+		DZA65_RS18480	0.85	-1.0
3,982,300	+		DZA65_RS18480	0.85	-0.1
3,982,300	+		DZA65_RS18480	0.85	-0.5
3,982,300	+		DZA65_RS18480	0.85	-0.4
3,982,301	-		DZA65_RS18480	0.85	+0.2
3,982,301	-		DZA65_RS18480	0.85	+1.2
3,982,301	-		DZA65_RS18480	0.85	-0.2
3,982,301	-		DZA65_RS18480	0.85	+0.2
3,982,363	+		DZA65_RS18480	0.88	-1.1
3,982,404	+		DZA65_RS18480	0.90	+0.6
3,982,404	+		DZA65_RS18480	0.90	-0.8
3,982,404	+		DZA65_RS18480	0.90	-0.2
3,982,404	+		DZA65_RS18480	0.90	-0.5
3,982,404	+		DZA65_RS18480	0.90	-0.3
3,982,404	+		DZA65_RS18480	0.90	+0.6
3,982,404	+		DZA65_RS18480	0.90	-0.7
3,982,404	+		DZA65_RS18480	0.90	+0.4
3,982,405	-		DZA65_RS18480	0.90	-1.2
3,982,450	-				-0.5
3,982,531	+				+1.0
3,982,532	-				-2.3
3,982,539	-				+0.0
3,982,539	-				-0.4
3,982,587	+				+0.2
3,982,587	+				-0.3
3,982,587	+				+0.0
3,982,610	+				+0.8
3,982,611	-				+0.1
3,982,611	-				-0.2
3,982,611	-				-0.3
3,982,619	-				-0.8
3,982,619	-				-0.7
3,982,619	-				+1.4
3,982,619	-				+0.6
3,982,620	+				-0.8
3,982,620	+				+0.6
3,982,620	+				+0.6
3,982,620	+				-1.4
3,982,621	-				-2.0
3,982,621	-				-0.8
3,982,621	-				-0.1
3,982,621	-				+1.4
3,982,621	-				-0.5
3,982,621	-				-0.5
3,982,621	-				-0.0
3,982,638	+				+0.8
3,982,638	+				+1.4
3,982,638	+				+0.3
3,982,638	+				+0.7
3,982,638	+				+0.1
3,982,638	+				+0.8
3,982,638	+				+1.0
3,982,639	-				+0.4
3,982,639	-				-0.5
3,982,639	-				+0.3
3,982,639	-				+0.3
3,982,639	-				-0.4
3,982,644	+				-0.3
3,982,644	+				-0.7
3,982,644	+				-0.8
3,982,644	+				-0.1
3,982,644	+				-0.5
3,982,644	+				+1.5
3,982,644	+				+0.2
3,982,644	+				-0.4
3,982,644	+				-0.8
3,982,644	+				+0.0
3,982,645	-				-0.2
3,982,645	-				-1.8
3,982,645	-				-1.7
3,982,645	-				-0.5
3,982,662	+				-0.3
3,982,669	+				+0.0
3,982,670	-				+1.0
3,982,687	+				+0.2
3,982,688	-				+0.5
3,982,688	-				+0.2
3,982,710	+				+0.2
3,982,710	+				-0.5
3,982,710	+				+0.1
3,982,710	+				+0.0
3,982,710	+				-0.5
3,982,711	-				+0.9
3,982,711	-				-0.1
3,982,711	-				-0.2
3,982,770	+				-0.7
3,982,831	+				-1.1
3,982,831	+				+0.6
3,982,831	+				-0.7
3,982,831	+				-1.4
3,982,832	-				+0.0
3,982,837	-				+0.0
3,982,853	-				+0.3
3,982,914	+				-0.8
3,983,002	+				+0.2
3,983,002	+				-1.0
3,983,068	+				-0.4
3,983,068	+				-0.7
3,983,068	+				+2.0
3,983,068	+				+0.0
3,983,069	-				-0.3
3,983,069	-				+0.0
3,983,069	-				+0.5
3,983,072	+				-0.3
3,983,072	+				-0.0
3,983,072	+				-1.0
3,983,073	-				+1.2
3,983,073	-				-0.5
3,983,073	-				+0.4
3,983,073	-				+1.4
3,983,073	-				-0.8
3,983,073	-				+0.5
3,983,138	+		DZA65_RS18485	0.12	-1.0
3,983,138	+		DZA65_RS18485	0.12	+0.6
3,983,138	+		DZA65_RS18485	0.12	-0.7
3,983,138	+		DZA65_RS18485	0.12	-0.7
3,983,138	+		DZA65_RS18485	0.12	-0.1
3,983,138	+		DZA65_RS18485	0.12	-0.1
3,983,138	+		DZA65_RS18485	0.12	+0.1
3,983,138	+		DZA65_RS18485	0.12	+0.6
3,983,139	-		DZA65_RS18485	0.12	-1.8
3,983,139	-		DZA65_RS18485	0.12	+0.6
3,983,139	-		DZA65_RS18485	0.12	+1.4
3,983,139	-		DZA65_RS18485	0.12	+0.2
3,983,139	-		DZA65_RS18485	0.12	-0.8
3,983,140	+		DZA65_RS18485	0.13	+1.0
3,983,140	+		DZA65_RS18485	0.13	+0.5
3,983,140	+		DZA65_RS18485	0.13	-0.2
3,983,141	-		DZA65_RS18485	0.13	-0.5
3,983,203	+		DZA65_RS18485	0.17	-0.1
3,983,250	-		DZA65_RS18485	0.20	+0.2
3,983,279	+		DZA65_RS18485	0.22	-0.1
3,983,280	-		DZA65_RS18485	0.23	+0.2
3,983,315	+		DZA65_RS18485	0.25	+2.0
3,983,434	+		DZA65_RS18485	0.34	-0.8
3,983,434	+		DZA65_RS18485	0.34	-0.9
3,983,434	+		DZA65_RS18485	0.34	+0.1
3,983,434	+		DZA65_RS18485	0.34	+0.4
3,983,435	-		DZA65_RS18485	0.34	+0.0
3,983,435	-		DZA65_RS18485	0.34	-0.9
3,983,435	-		DZA65_RS18485	0.34	+0.0
3,983,435	-		DZA65_RS18485	0.34	+0.8
3,983,435	-		DZA65_RS18485	0.34	+1.3
3,983,435	-		DZA65_RS18485	0.34	+0.6
3,983,435	-		DZA65_RS18485	0.34	-0.2
3,983,435	-		DZA65_RS18485	0.34	+0.3
3,983,435	-		DZA65_RS18485	0.34	+0.2
3,983,435	-		DZA65_RS18485	0.34	+0.6
3,983,435	-		DZA65_RS18485	0.34	-0.3
3,983,449	+		DZA65_RS18485	0.35	+0.4
3,983,449	+		DZA65_RS18485	0.35	-0.5
3,983,452	+		DZA65_RS18485	0.35	-0.6
3,983,452	+		DZA65_RS18485	0.35	-0.1
3,983,453	-		DZA65_RS18485	0.35	-0.3
3,983,453	-		DZA65_RS18485	0.35	-0.2
3,983,453	-		DZA65_RS18485	0.35	+0.2
3,983,453	-		DZA65_RS18485	0.35	-0.6
3,983,453	-		DZA65_RS18485	0.35	-1.5
3,983,467	+		DZA65_RS18485	0.36	+0.0
3,983,467	+		DZA65_RS18485	0.36	-1.8
3,983,554	+		DZA65_RS18485	0.42	-0.8
3,983,555	-		DZA65_RS18485	0.42	-2.0
3,983,555	-		DZA65_RS18485	0.42	-1.3
3,983,563	+		DZA65_RS18485	0.43	+0.1
3,983,564	-		DZA65_RS18485	0.43	-2.5
3,983,590	+		DZA65_RS18485	0.45	-1.3
3,983,591	-		DZA65_RS18485	0.45	-2.0
3,983,618	+		DZA65_RS18485	0.47	+0.1
3,983,618	+				-1.5
3,983,619	-		DZA65_RS18485	0.47	-0.8
3,983,619	-		DZA65_RS18485	0.47	-0.4
3,983,619	-		DZA65_RS18485	0.47	-0.8