Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18240

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,931,502	-				+0.4
3,931,512	-				-0.1
3,931,512	-				+0.4
3,931,512	-				+1.0
3,931,514	-				-0.2
3,931,514	-				+0.0
3,931,514	-				-1.0
3,931,514	-				+1.1
3,931,514	-				-1.3
3,931,514	-				-0.2
3,931,514	-				-0.3
3,931,514	-				+0.8
3,931,514	-				-1.6
3,931,514	-				-0.8
3,931,516	+				+0.6
3,931,517	-				-0.7
3,931,517	-				+1.8
3,931,529	+				-0.3
3,931,529	+				-1.2
3,931,529	+				+0.6
3,931,529	+				+1.3
3,931,529	+				-0.3
3,931,530	-				-1.0
3,931,530	-				-0.8
3,931,530	-				-1.0
3,931,530	-				-1.6
3,931,550	+				-0.2
3,931,550	+				-1.0
3,931,550	+				+1.0
3,931,550	+				+0.3
3,931,550	+				-0.3
3,931,550	+				-0.1
3,931,551	-				+0.1
3,931,551	-				+0.0
3,931,551	-				-0.1
3,931,551	-				-0.2
3,931,551	-				+0.1
3,931,551	-				-0.4
3,931,571	+				-1.4
3,931,571	+				+0.2
3,931,572	-				+0.5
3,931,587	+				-2.4
3,931,754	+				-0.6
3,931,754	+				-2.0
3,931,754	+				-0.8
3,931,754	+				-0.2
3,931,754	+				-0.2
3,931,754	+				+0.0
3,931,754	+				+0.6
3,931,754	+				+0.5
3,931,754	+				+0.0
3,931,754	+				+1.0
3,931,754	+				-0.9
3,931,755	-				+0.3
3,931,755	-				-0.1
3,931,755	-				-0.3
3,931,755	-				+0.0
3,931,755	-				+0.5
3,931,755	-				+0.1
3,931,755	-				+0.8
3,931,755	-				+0.4
3,931,821	+				+1.2
3,931,821	+				-0.4
3,931,822	-				+1.0
3,931,822	-				-0.9
3,931,822	-				-1.8
3,931,831	-				+1.0
3,931,883	+				-1.1
3,931,883	+				+0.4
3,931,883	+				-0.0
3,931,884	-				-1.4
3,931,884	-				-0.4
3,931,884	-				-0.6
3,932,081	+		DZA65_RS18240	0.16	-0.2
3,932,082	-		DZA65_RS18240	0.16	-0.6
3,932,082	-		DZA65_RS18240	0.16	-0.4
3,932,141	+		DZA65_RS18240	0.18	-0.8
3,932,141	+		DZA65_RS18240	0.18	+1.0
3,932,142	-		DZA65_RS18240	0.18	+1.9
3,932,216	+		DZA65_RS18240	0.21	-1.2
3,932,235	+		DZA65_RS18240	0.21	-0.9
3,932,235	+		DZA65_RS18240	0.21	+0.2
3,932,236	-		DZA65_RS18240	0.21	-0.8
3,932,236	-		DZA65_RS18240	0.21	-1.3
3,932,279	+		DZA65_RS18240	0.23	-1.1
3,932,279	+		DZA65_RS18240	0.23	+0.5
3,932,279	+		DZA65_RS18240	0.23	-0.6
3,932,280	-		DZA65_RS18240	0.23	-0.8
3,932,280	-		DZA65_RS18240	0.23	-0.2
3,932,280	-		DZA65_RS18240	0.23	+0.5
3,932,280	-		DZA65_RS18240	0.23	-0.7
3,932,280	-		DZA65_RS18240	0.23	-0.1
3,932,369	+		DZA65_RS18240	0.26	-0.2
3,932,369	+		DZA65_RS18240	0.26	+0.3
3,932,369	+		DZA65_RS18240	0.26	-1.7
3,932,370	-		DZA65_RS18240	0.26	-1.8
3,932,394	+		DZA65_RS18240	0.27	-1.4
3,932,395	-		DZA65_RS18240	0.27	-0.1
3,932,395	-		DZA65_RS18240	0.27	-0.1
3,932,395	-		DZA65_RS18240	0.27	-0.6
3,932,395	-		DZA65_RS18240	0.27	-2.2
3,932,488	+		DZA65_RS18240	0.30	+1.6
3,932,489	-		DZA65_RS18240	0.30	+0.3
3,932,520	-		DZA65_RS18240	0.31	-1.3
3,932,520	-		DZA65_RS18240	0.31	-0.9
3,932,520	-		DZA65_RS18240	0.31	+1.0
3,932,524	+		DZA65_RS18240	0.31	-0.1
3,932,524	+		DZA65_RS18240	0.31	-0.2
3,932,525	-		DZA65_RS18240	0.31	+0.6
3,932,656	+		DZA65_RS18240	0.36	-0.2
3,932,656	+		DZA65_RS18240	0.36	+0.6
3,932,656	+		DZA65_RS18240	0.36	-0.2
3,932,656	+		DZA65_RS18240	0.36	+0.6
3,932,656	+		DZA65_RS18240	0.36	+0.6
3,932,656	+		DZA65_RS18240	0.36	+0.5
3,932,657	-		DZA65_RS18240	0.36	-1.4
3,932,657	-		DZA65_RS18240	0.36	+0.5
3,932,657	-		DZA65_RS18240	0.36	+1.3
3,932,657	-		DZA65_RS18240	0.36	+0.8
3,932,657	-		DZA65_RS18240	0.36	-2.3
3,932,657	-		DZA65_RS18240	0.36	+2.3
3,932,657	-		DZA65_RS18240	0.36	+0.3
3,932,660	+		DZA65_RS18240	0.36	-0.9
3,932,660	+		DZA65_RS18240	0.36	-0.3
3,932,660	+		DZA65_RS18240	0.36	-0.6
3,932,660	+		DZA65_RS18240	0.36	+1.0
3,932,661	-		DZA65_RS18240	0.36	+1.0
3,932,661	-		DZA65_RS18240	0.36	-0.2
3,932,682	-		DZA65_RS18240	0.37	-1.4
3,932,705	+		DZA65_RS18240	0.38	+0.4
3,932,705	+		DZA65_RS18240	0.38	-1.3
3,932,705	+		DZA65_RS18240	0.38	+0.0
3,932,705	+		DZA65_RS18240	0.38	-0.4
3,932,706	-		DZA65_RS18240	0.38	-0.3
3,932,706	-		DZA65_RS18240	0.38	-0.6
3,932,706	-		DZA65_RS18240	0.38	+0.2
3,932,706	-		DZA65_RS18240	0.38	+0.0
3,932,840	+		DZA65_RS18240	0.42	+2.0
3,932,841	-		DZA65_RS18240	0.42	-0.3
3,932,841	-		DZA65_RS18240	0.42	+0.4
3,932,888	-		DZA65_RS18240	0.44	-0.7
3,932,989	+		DZA65_RS18240	0.48	+0.0
3,932,989	+		DZA65_RS18240	0.48	+1.0
3,933,108	-		DZA65_RS18240	0.52	+0.9
3,933,199	+		DZA65_RS18240	0.55	-1.4
3,933,199	+		DZA65_RS18240	0.55	-0.6
3,933,200	-		DZA65_RS18240	0.55	-0.5
3,933,261	+		DZA65_RS18240	0.57	-0.2
3,933,337	+		DZA65_RS18240	0.60	-0.2
3,933,338	-		DZA65_RS18240	0.60	-1.9
3,933,338	-		DZA65_RS18240	0.60	-0.9
3,933,338	-		DZA65_RS18240	0.60	-0.1
3,933,341	+		DZA65_RS18240	0.60	+0.3
3,933,341	+		DZA65_RS18240	0.60	+0.3
3,933,341	+		DZA65_RS18240	0.60	+0.3
3,933,342	-		DZA65_RS18240	0.60	+0.0
3,933,342	-		DZA65_RS18240	0.60	+0.9
3,933,342	-		DZA65_RS18240	0.60	+0.5
3,933,342	-		DZA65_RS18240	0.60	+0.3
3,933,342	-		DZA65_RS18240	0.60	+0.7
3,933,574	+		DZA65_RS18240	0.68	+0.8
3,933,575	-		DZA65_RS18240	0.68	-0.9
3,933,601	-		DZA65_RS18240	0.69	+1.3
3,933,601	-		DZA65_RS18240	0.69	-1.2
3,933,603	-		DZA65_RS18240	0.69	-0.9
3,933,603	-		DZA65_RS18240	0.69	-2.4
3,933,603	-		DZA65_RS18240	0.69	-0.7
3,933,651	-		DZA65_RS18240	0.71	-0.8
3,933,728	+		DZA65_RS18240	0.74	-0.2
3,933,728	+		DZA65_RS18240	0.74	-1.2
3,933,728	+		DZA65_RS18240	0.74	+1.3
3,933,728	+		DZA65_RS18240	0.74	+0.2
3,933,728	+		DZA65_RS18240	0.74	+0.0
3,933,728	+		DZA65_RS18240	0.74	-1.4
3,933,728	+		DZA65_RS18240	0.74	+0.6
3,933,729	-		DZA65_RS18240	0.74	-0.9
3,933,729	-		DZA65_RS18240	0.74	-1.6
3,933,729	-		DZA65_RS18240	0.74	+0.4
3,933,729	-		DZA65_RS18240	0.74	-0.8
3,933,729	-		DZA65_RS18240	0.74	+1.1
3,933,729	-		DZA65_RS18240	0.74	-1.0
3,933,729	-		DZA65_RS18240	0.74	-0.2
3,933,729	-		DZA65_RS18240	0.74	-1.4
3,933,729	-		DZA65_RS18240	0.74	-0.2
3,933,746	+		DZA65_RS18240	0.74	-0.6
3,933,746	+		DZA65_RS18240	0.74	+0.0
3,933,746	+		DZA65_RS18240	0.74	+0.3
3,933,746	+		DZA65_RS18240	0.74	+0.3
3,933,746	+		DZA65_RS18240	0.74	+0.6
3,933,746	+		DZA65_RS18240	0.74	+0.8
3,933,747	-		DZA65_RS18240	0.74	+0.0
3,933,747	-		DZA65_RS18240	0.74	-1.4
3,933,879	+		DZA65_RS18240	0.79	-1.3
3,934,023	+		DZA65_RS18240	0.84	+0.3
3,934,023	+		DZA65_RS18240	0.84	-0.2
3,934,024	-		DZA65_RS18240	0.84	+1.2
3,934,024	-		DZA65_RS18240	0.84	+0.5
3,934,059	-		DZA65_RS18240	0.85	+0.2
3,934,059	-		DZA65_RS18240	0.85	-2.3
3,934,059	-		DZA65_RS18240	0.85	+0.3
3,934,087	+		DZA65_RS18240	0.86	+1.0
3,934,087	+		DZA65_RS18240	0.86	+0.3
3,934,087	+		DZA65_RS18240	0.86	-0.2
3,934,088	-		DZA65_RS18240	0.86	-2.0
3,934,088	-		DZA65_RS18240	0.86	+0.4
3,934,088	-		DZA65_RS18240	0.86	+0.0
3,934,131	+		DZA65_RS18240	0.88	+0.4
3,934,131	+		DZA65_RS18240	0.88	+0.0
3,934,205	-				-0.2
3,934,205	-				-0.1
3,934,438	+				-2.0
3,934,438	+				+0.3
3,934,438	+				-0.5
3,934,438	+				-0.3
3,934,439	-				-0.5
3,934,439	-				+0.5
3,934,439	-				-2.0
3,934,439	-				-2.4
3,934,439	-				+0.7
3,934,439	-				+0.0
3,934,439	-				-1.6
3,934,439	-				-0.4
3,934,439	-				+0.3
3,934,518	-				+0.3
3,934,540	+				-0.4
3,934,540	+				-0.2
3,934,540	+				-0.2
3,934,540	+				-0.8
3,934,541	-				+0.4
3,934,541	-				+0.3
3,934,593	+				-0.1
3,934,594	-				-0.2
3,934,594	-				+0.7
3,934,664	+				-0.2
3,934,666	+				+0.4
3,934,666	+				-1.1
3,934,666	+				+0.1
3,934,666	+				-0.4
3,934,666	+				-0.2
3,934,666	+				-1.3
3,934,666	+				+0.1
3,934,666	+				+0.3
3,934,667	-				+0.4
3,934,667	-				+0.4
3,934,667	-				+0.3
3,934,667	-				+0.7
3,934,726	-		DZA65_RS18245	0.10	+1.0
3,934,749	+		DZA65_RS18245	0.12	+0.8
3,934,812	+		DZA65_RS18245	0.17	+0.0
3,934,812	+		DZA65_RS18245	0.17	+0.8
3,934,813	-		DZA65_RS18245	0.17	+1.2
3,934,813	-		DZA65_RS18245	0.17	+0.0
3,934,813	-		DZA65_RS18245	0.17	-0.3
3,934,813	-		DZA65_RS18245	0.17	+0.0
3,934,831	+		DZA65_RS18245	0.18	-1.8
3,934,831	+		DZA65_RS18245	0.18	+0.3
3,934,831	+		DZA65_RS18245	0.18	-0.8
3,934,831	+		DZA65_RS18245	0.18	-0.2
3,934,831	+		DZA65_RS18245	0.18	-0.2
3,934,831	+		DZA65_RS18245	0.18	+0.7
3,934,831	+		DZA65_RS18245	0.18	-0.1
3,934,831	+		DZA65_RS18245	0.18	+0.4
3,934,831	+		DZA65_RS18245	0.18	+0.4
3,934,831	+		DZA65_RS18245	0.18	+0.6
3,934,832	-		DZA65_RS18245	0.18	-0.4
3,934,832	-		DZA65_RS18245	0.18	+0.1
3,934,832	-		DZA65_RS18245	0.18	+0.4
3,934,832	-		DZA65_RS18245	0.18	+0.5
3,934,832	-		DZA65_RS18245	0.18	+0.7
3,934,832	-		DZA65_RS18245	0.18	+1.6
3,934,832	-		DZA65_RS18245	0.18	+0.7
3,934,832	-		DZA65_RS18245	0.18	+1.8
3,934,935	+		DZA65_RS18245	0.26	+0.3
3,934,935	+		DZA65_RS18245	0.26	+2.0
3,934,936	-		DZA65_RS18245	0.26	+1.2
3,934,956	-		DZA65_RS18245	0.27	+0.5
3,934,992	+		DZA65_RS18245	0.30	+0.2
3,934,992	+		DZA65_RS18245	0.30	-1.2
3,934,992	+		DZA65_RS18245	0.30	-1.3
3,935,004	+		DZA65_RS18245	0.31	-1.1
3,935,004	+		DZA65_RS18245	0.31	+0.3
3,935,004	+		DZA65_RS18245	0.31	+0.5
3,935,015	-		DZA65_RS18245	0.32	-0.8
3,935,030	-		DZA65_RS18245	0.33	+0.8
3,935,196	+		DZA65_RS18245	0.45	-0.2
3,935,196	+		DZA65_RS18245	0.45	-0.3
3,935,196	+		DZA65_RS18245	0.45	+0.4
3,935,323	-				-0.6
3,935,357	+		DZA65_RS18245	0.57	+0.8