Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14535

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,165,227	+		DZA65_RS14530	0.28	-0.1
3,165,227	+		DZA65_RS14530	0.28	-0.8
3,165,227	+		DZA65_RS14530	0.28	-0.5
3,165,227	+		DZA65_RS14530	0.28	-1.1
3,165,228	-		DZA65_RS14530	0.28	-1.2
3,165,228	-		DZA65_RS14530	0.28	+1.7
3,165,228	-		DZA65_RS14530	0.28	+0.4
3,165,228	-		DZA65_RS14530	0.28	-2.8
3,165,228	-		DZA65_RS14530	0.28	+0.5
3,165,255	+		DZA65_RS14530	0.30	-1.3
3,165,255	+		DZA65_RS14530	0.30	-2.0
3,165,259	+		DZA65_RS14530	0.31	+1.3
3,165,259	+		DZA65_RS14530	0.31	-1.3
3,165,259	+		DZA65_RS14530	0.31	-2.0
3,165,259	+		DZA65_RS14530	0.31	-1.7
3,165,260	-		DZA65_RS14530	0.31	+0.1
3,165,260	-		DZA65_RS14530	0.31	-0.6
3,165,260	-		DZA65_RS14530	0.31	-0.6
3,165,260	-		DZA65_RS14530	0.31	-0.3
3,165,260	-		DZA65_RS14530	0.31	+0.4
3,165,260	-		DZA65_RS14530	0.31	+0.2
3,165,260	-		DZA65_RS14530	0.31	-0.3
3,165,260	-		DZA65_RS14530	0.31	+0.0
3,165,300	+		DZA65_RS14530	0.34	-0.2
3,165,301	-		DZA65_RS14530	0.34	-1.6
3,165,301	-		DZA65_RS14530	0.34	+1.7
3,165,301	-		DZA65_RS14530	0.34	-0.8
3,165,328	-		DZA65_RS14530	0.37	+1.1
3,165,333	+		DZA65_RS14530	0.37	-0.8
3,165,333	+		DZA65_RS14530	0.37	+0.4
3,165,342	+		DZA65_RS14530	0.38	+0.3
3,165,342	+		DZA65_RS14530	0.38	-1.0
3,165,388	-		DZA65_RS14530	0.42	-1.1
3,165,408	+		DZA65_RS14530	0.44	-0.0
3,165,470	+		DZA65_RS14530	0.50	+0.7
3,165,471	-		DZA65_RS14530	0.50	-0.4
3,165,575	-		DZA65_RS14530	0.59	-1.9
3,165,614	+		DZA65_RS14530	0.63	+1.0
3,165,614	+		DZA65_RS14530	0.63	+0.3
3,165,614	+		DZA65_RS14530	0.63	-0.0
3,165,614	+		DZA65_RS14530	0.63	+0.3
3,165,614	+		DZA65_RS14530	0.63	-1.0
3,165,614	+		DZA65_RS14530	0.63	-0.5
3,165,614	+		DZA65_RS14530	0.63	+0.2
3,165,615	-		DZA65_RS14530	0.63	-0.7
3,165,615	-		DZA65_RS14530	0.63	-0.6
3,165,615	-		DZA65_RS14530	0.63	-0.6
3,165,615	-		DZA65_RS14530	0.63	+0.0
3,165,615	-		DZA65_RS14530	0.63	-0.6
3,165,615	-		DZA65_RS14530	0.63	-0.5
3,165,615	-		DZA65_RS14530	0.63	-0.5
3,165,618	+		DZA65_RS14530	0.63	-0.0
3,165,618	+		DZA65_RS14530	0.63	-0.5
3,165,618	+		DZA65_RS14530	0.63	-2.1
3,165,619	-		DZA65_RS14530	0.63	-0.1
3,165,619	-		DZA65_RS14530	0.63	+0.1
3,165,654	+		DZA65_RS14530	0.67	-2.3
3,165,654	+		DZA65_RS14530	0.67	-0.0
3,165,654	+		DZA65_RS14530	0.67	+0.1
3,165,654	+		DZA65_RS14530	0.67	-0.0
3,165,718	+		DZA65_RS14530	0.72	-0.2
3,165,718	+		DZA65_RS14530	0.72	+0.3
3,165,719	-		DZA65_RS14530	0.72	-0.9
3,165,719	-		DZA65_RS14530	0.72	+0.4
3,165,719	-		DZA65_RS14530	0.72	+0.4
3,165,740	-		DZA65_RS14530	0.74	-1.9
3,165,740	-		DZA65_RS14530	0.74	-0.9
3,165,740	-		DZA65_RS14530	0.74	+0.2
3,165,756	+		DZA65_RS14530	0.76	-2.5
3,165,756	+		DZA65_RS14530	0.76	-1.0
3,165,756	+		DZA65_RS14530	0.76	-0.2
3,165,756	+		DZA65_RS14530	0.76	+0.4
3,165,756	+		DZA65_RS14530	0.76	-0.3
3,165,756	+		DZA65_RS14530	0.76	-0.0
3,165,756	+		DZA65_RS14530	0.76	+0.8
3,165,757	-		DZA65_RS14530	0.76	-0.9
3,165,757	-		DZA65_RS14530	0.76	+1.0
3,165,757	-		DZA65_RS14530	0.76	+1.1
3,165,757	-		DZA65_RS14530	0.76	+0.7
3,165,757	-		DZA65_RS14530	0.76	-0.4
3,165,760	+		DZA65_RS14530	0.76	-0.2
3,165,760	+		DZA65_RS14530	0.76	-0.0
3,165,761	-		DZA65_RS14530	0.76	-0.5
3,165,761	-		DZA65_RS14530	0.76	-0.4
3,165,761	-		DZA65_RS14530	0.76	+0.2
3,165,761	-		DZA65_RS14530	0.76	+0.4
3,165,761	-		DZA65_RS14530	0.76	-0.4
3,165,761	-		DZA65_RS14530	0.76	+0.5
3,165,761	-		DZA65_RS14530	0.76	-0.3
3,165,762	-		DZA65_RS14530	0.76	-0.7
3,165,790	+		DZA65_RS14530	0.79	+0.2
3,165,790	+		DZA65_RS14530	0.79	+0.4
3,165,790	+		DZA65_RS14530	0.79	-0.8
3,165,791	-		DZA65_RS14530	0.79	+0.0
3,165,791	-		DZA65_RS14530	0.79	+0.0
3,165,791	-		DZA65_RS14530	0.79	+0.2
3,165,791	-		DZA65_RS14530	0.79	-0.2
3,165,806	+		DZA65_RS14530	0.80	-0.5
3,165,806	+		DZA65_RS14530	0.80	+0.7
3,165,806	+		DZA65_RS14530	0.80	-1.3
3,165,807	-		DZA65_RS14530	0.81	-0.1
3,165,821	+		DZA65_RS14530	0.82	+0.4
3,165,822	-		DZA65_RS14530	0.82	-1.6
3,165,871	+		DZA65_RS14530	0.86	+0.7
3,165,899	+		DZA65_RS14530	0.89	-1.6
3,165,899	+		DZA65_RS14530	0.89	-0.1
3,165,900	-		DZA65_RS14530	0.89	+0.9
3,165,900	-		DZA65_RS14530	0.89	+0.2
3,165,900	-		DZA65_RS14530	0.89	-0.9
3,165,900	-		DZA65_RS14530	0.89	+1.5
3,165,900	-		DZA65_RS14530	0.89	+0.2
3,165,924	+				-0.1
3,165,925	-				+0.2
3,165,931	-				+0.4
3,165,931	-				-0.6
3,165,931	-				-0.1
3,165,931	-				+1.0
3,165,931	-				-2.1
3,165,931	-				-0.5
3,165,931	-				-0.0
3,165,933	-				-0.9
3,165,961	-				+0.3
3,165,972	+				+0.2
3,165,972	+				+0.4
3,165,973	-				+0.5
3,165,973	-				+0.3
3,165,982	+				+0.3
3,165,983	-				-0.6
3,165,998	+				-0.4
3,166,002	+				+0.9
3,166,002	+				-0.3
3,166,002	+				+0.7
3,166,003	-				+0.7
3,166,046	+				+0.0
3,166,046	+				-0.7
3,166,047	-				-0.5
3,166,070	-				-1.0
3,166,070	-				+0.3
3,166,070	-				-1.1
3,166,070	-				+0.1
3,166,092	+				-0.8
3,166,093	-				+0.9
3,166,121	+				+0.3
3,166,124	-				-0.7
3,166,285	+		DZA65_RS14535	0.16	-0.8
3,166,285	+		DZA65_RS14535	0.16	+0.3
3,166,335	+		DZA65_RS14535	0.21	-0.1
3,166,335	+		DZA65_RS14535	0.21	-1.0
3,166,335	+		DZA65_RS14535	0.21	-1.9
3,166,336	-		DZA65_RS14535	0.21	-0.1
3,166,336	-		DZA65_RS14535	0.21	-0.5
3,166,336	-		DZA65_RS14535	0.21	+0.0
3,166,390	+		DZA65_RS14535	0.27	-0.1
3,166,390	+		DZA65_RS14535	0.27	+0.7
3,166,478	+		DZA65_RS14535	0.36	-0.0
3,166,478	+		DZA65_RS14535	0.36	+1.2
3,166,478	+		DZA65_RS14535	0.36	-1.0
3,166,479	-		DZA65_RS14535	0.36	-1.3
3,166,479	-		DZA65_RS14535	0.36	-2.9
3,166,489	+		DZA65_RS14535	0.38	-0.6
3,166,490	-		DZA65_RS14535	0.38	-0.5
3,166,635	-		DZA65_RS14535	0.53	-0.5
3,166,744	-		DZA65_RS14535	0.65	+0.0
3,166,777	+		DZA65_RS14535	0.68	-1.4
3,166,777	+		DZA65_RS14535	0.68	+0.4
3,166,778	-		DZA65_RS14535	0.69	+0.6
3,166,778	-		DZA65_RS14535	0.69	-1.8
3,166,778	-		DZA65_RS14535	0.69	-0.3
3,166,778	-		DZA65_RS14535	0.69	+0.6
3,166,778	-		DZA65_RS14535	0.69	+0.7
3,166,778	-		DZA65_RS14535	0.69	-0.3
3,166,808	+		DZA65_RS14535	0.72	-0.9
3,166,808	+		DZA65_RS14535	0.72	-0.2
3,166,808	+		DZA65_RS14535	0.72	+0.5
3,166,809	-		DZA65_RS14535	0.72	-0.6
3,166,809	-		DZA65_RS14535	0.72	-0.1
3,166,918	+		DZA65_RS14535	0.84	+0.3
3,166,919	-		DZA65_RS14535	0.84	-0.9
3,166,985	+				-0.7
3,167,075	+				-0.7
3,167,075	+				-0.8
3,167,075	+				-0.6
3,167,076	-				+0.4
3,167,076	-				+0.2
3,167,088	+				-0.3
3,167,088	+				+0.3
3,167,088	+				-0.0
3,167,089	-				+1.2
3,167,098	-				-0.2
3,167,098	-				-0.2
3,167,117	+				-0.8
3,167,117	+				-0.7
3,167,117	+				-0.3
3,167,117	+				+1.2
3,167,117	+				+0.4
3,167,117	+				+0.8
3,167,117	+				-0.4
3,167,118	-				-0.3
3,167,118	-				-0.8
3,167,118	-				-1.5
3,167,118	-				+0.3
3,167,118	-				+0.4
3,167,119	+				-0.3
3,167,119	+				+0.4
3,167,169	+		DZA65_RS14540	0.12	-2.2
3,167,188	+		DZA65_RS14540	0.14	+1.0
3,167,189	-		DZA65_RS14540	0.14	+0.6
3,167,239	-		DZA65_RS14540	0.19	+0.7
3,167,239	-		DZA65_RS14540	0.19	-0.1
3,167,239	-		DZA65_RS14540	0.19	+0.7
3,167,239	-		DZA65_RS14540	0.19	-0.9
3,167,239	-		DZA65_RS14540	0.19	+0.2
3,167,241	+		DZA65_RS14540	0.19	+0.3
3,167,277	+		DZA65_RS14540	0.23	-0.3
3,167,277	+		DZA65_RS14540	0.23	-0.2
3,167,277	+		DZA65_RS14540	0.23	-0.1
3,167,278	-		DZA65_RS14540	0.23	-0.5
3,167,291	+		DZA65_RS14540	0.25	-0.2
3,167,292	-		DZA65_RS14540	0.25	-0.3
3,167,348	+		DZA65_RS14540	0.30	+1.5
3,167,349	-		DZA65_RS14540	0.31	-0.5
3,167,349	-		DZA65_RS14540	0.31	+1.4
3,167,349	-		DZA65_RS14540	0.31	-1.3
3,167,349	-		DZA65_RS14540	0.31	-0.8
3,167,349	-		DZA65_RS14540	0.31	-0.2
3,167,358	-		DZA65_RS14540	0.31	-0.1
3,167,364	+		DZA65_RS14540	0.32	+0.2
3,167,364	+		DZA65_RS14540	0.32	-1.0
3,167,364	+		DZA65_RS14540	0.32	-0.1
3,167,364	+		DZA65_RS14540	0.32	-0.8
3,167,364	+		DZA65_RS14540	0.32	-0.3
3,167,364	+		DZA65_RS14540	0.32	+0.1
3,167,365	-		DZA65_RS14540	0.32	+0.1
3,167,365	-		DZA65_RS14540	0.32	-0.0
3,167,365	-		DZA65_RS14540	0.32	-0.7
3,167,365	-		DZA65_RS14540	0.32	+1.0
3,167,366	+		DZA65_RS14540	0.32	+0.3
3,167,366	+				+1.1
3,167,366	+		DZA65_RS14540	0.32	+0.1
3,167,366	+		DZA65_RS14540	0.32	-1.8
3,167,366	+		DZA65_RS14540	0.32	+0.5
3,167,366	+		DZA65_RS14540	0.32	-1.5
3,167,366	+		DZA65_RS14540	0.32	-0.4
3,167,366	+		DZA65_RS14540	0.32	+0.3
3,167,366	+		DZA65_RS14540	0.32	-0.3
3,167,366	+		DZA65_RS14540	0.32	+0.1
3,167,366	+		DZA65_RS14540	0.32	-0.4
3,167,366	+		DZA65_RS14540	0.32	-0.2
3,167,366	+		DZA65_RS14540	0.32	-1.0
3,167,366	+		DZA65_RS14540	0.32	-0.6
3,167,366	+		DZA65_RS14540	0.32	-1.2
3,167,366	+		DZA65_RS14540	0.32	-0.2
3,167,367	-		DZA65_RS14540	0.32	-0.3
3,167,367	-		DZA65_RS14540	0.32	+0.9
3,167,367	-		DZA65_RS14540	0.32	-1.0
3,167,367	-		DZA65_RS14540	0.32	-1.2
3,167,367	-		DZA65_RS14540	0.32	+0.5
3,167,367	-		DZA65_RS14540	0.32	+0.5
3,167,367	-		DZA65_RS14540	0.32	+0.8
3,167,367	-		DZA65_RS14540	0.32	-0.3
3,167,367	-		DZA65_RS14540	0.32	-0.5
3,167,367	-		DZA65_RS14540	0.32	-1.1
3,167,367	-		DZA65_RS14540	0.32	-0.1
3,167,367	-		DZA65_RS14540	0.32	+0.8
3,167,367	-		DZA65_RS14540	0.32	-0.1
3,167,367	-		DZA65_RS14540	0.32	+0.3
3,167,367	-		DZA65_RS14540	0.32	+0.7
3,167,368	+		DZA65_RS14540	0.33	-0.3
3,167,368	+		DZA65_RS14540	0.33	-1.8
3,167,368	+		DZA65_RS14540	0.33	-0.2
3,167,368	+		DZA65_RS14540	0.33	+1.0
3,167,369	-		DZA65_RS14540	0.33	+1.3
3,167,369	-		DZA65_RS14540	0.33	+3.9
3,167,369	-		DZA65_RS14540	0.33	+0.2
3,167,369	-		DZA65_RS14540	0.33	-1.1
3,167,369	-		DZA65_RS14540	0.33	+0.3
3,167,369	-		DZA65_RS14540	0.33	-0.1
3,167,468	+		DZA65_RS14540	0.43	+0.1
3,167,519	+		DZA65_RS14540	0.48	-0.2
3,167,519	+		DZA65_RS14540	0.48	-1.6
3,167,520	-		DZA65_RS14540	0.48	-1.5
3,167,520	-		DZA65_RS14540	0.48	-1.0
3,167,520	-		DZA65_RS14540	0.48	-0.2
3,167,520	-		DZA65_RS14540	0.48	+0.4
3,167,520	-		DZA65_RS14540	0.48	+0.1
3,167,547	-		DZA65_RS14540	0.51	-0.2
3,167,640	+		DZA65_RS14540	0.60	+0.7
3,167,657	+		DZA65_RS14540	0.62	+0.3
3,167,762	-		DZA65_RS14540	0.73	+0.2
3,167,767	+		DZA65_RS14540	0.74	-2.1
3,167,767	+		DZA65_RS14540	0.74	+0.2
3,167,767	+		DZA65_RS14540	0.74	-1.5
3,167,767	+		DZA65_RS14540	0.74	-0.3
3,167,767	+		DZA65_RS14540	0.74	+0.2
3,167,767	+		DZA65_RS14540	0.74	+0.6
3,167,768	-		DZA65_RS14540	0.74	-0.6
3,167,768	-		DZA65_RS14540	0.74	+0.8
3,167,768	-		DZA65_RS14540	0.74	+0.3
3,167,768	-		DZA65_RS14540	0.74	+0.4
3,167,768	-		DZA65_RS14540	0.74	-0.2
3,167,768	-		DZA65_RS14540	0.74	-0.1
3,167,782	+		DZA65_RS14540	0.75	-0.4
3,167,782	+		DZA65_RS14540	0.75	-0.1
3,167,782	+		DZA65_RS14540	0.75	+0.9
3,167,783	-		DZA65_RS14540	0.75	+0.2
3,167,822	+				+1.7
3,167,839	-		DZA65_RS14540	0.81	-0.5
3,167,839	-		DZA65_RS14540	0.81	-0.1
3,167,943	-				-0.3
3,167,984	+				-0.8
3,167,985	-				+0.8
3,168,013	-				-0.5
3,168,025	+				+0.5
3,168,026	-				+0.3
3,168,029	-				-0.5
3,168,039	+				+0.8
3,168,039	+				+0.9
3,168,039	+				+0.9
3,168,040	-				+1.8