Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13345

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,857,727	+		DZA65_RS13340	0.72	+0.3
2,857,727	+		DZA65_RS13340	0.72	+0.3
2,857,727	+		DZA65_RS13340	0.72	-0.3
2,857,766	+		DZA65_RS13340	0.74	+0.9
2,857,766	+		DZA65_RS13340	0.74	-0.9
2,857,767	-		DZA65_RS13340	0.74	-0.9
2,857,767	-		DZA65_RS13340	0.74	+0.2
2,857,864	+		DZA65_RS13340	0.78	-1.9
2,857,868	-		DZA65_RS13340	0.78	-0.4
2,857,871	+		DZA65_RS13340	0.78	+0.3
2,857,938	+		DZA65_RS13340	0.81	-0.6
2,857,938	+		DZA65_RS13340	0.81	-0.4
2,857,938	+		DZA65_RS13340	0.81	-0.8
2,857,938	+		DZA65_RS13340	0.81	+0.1
2,857,938	+		DZA65_RS13340	0.81	+0.3
2,857,939	-		DZA65_RS13340	0.81	-0.1
2,857,939	-		DZA65_RS13340	0.81	+0.3
2,857,939	-		DZA65_RS13340	0.81	+0.1
2,858,053	+		DZA65_RS13340	0.86	-0.4
2,858,053	+		DZA65_RS13340	0.86	-0.1
2,858,179	+				+1.7
2,858,179	+				-0.3
2,858,179	+				-0.4
2,858,179	+				-0.2
2,858,179	+				+0.6
2,858,179	+				+0.2
2,858,179	+				+0.0
2,858,179	+				-0.4
2,858,179	+				+0.1
2,858,179	+				-0.5
2,858,180	-				-1.7
2,858,180	-				-0.1
2,858,180	-				-1.0
2,858,180	-				+0.2
2,858,180	-				-0.7
2,858,180	-				+0.1
2,858,180	-				+0.2
2,858,183	+				-1.1
2,858,183	+				+0.1
2,858,183	+				-0.2
2,858,183	+				-0.8
2,858,184	-				+0.3
2,858,220	-				-0.0
2,858,336	+				+0.1
2,858,337	-				-1.2
2,858,337	-				-1.0
2,858,337	-				-0.0
2,858,350	+				+0.8
2,858,350	+				-0.2
2,858,350	+				-0.3
2,858,351	-				+0.4
2,858,351	-				-0.8
2,858,351	-				-0.3
2,858,351	-				-0.3
2,858,351	-				+0.4
2,858,351	-				+1.2
2,858,363	+				-0.2
2,858,363	+				-0.6
2,858,364	-				-0.1
2,858,364	-				+1.0
2,858,370	-				-0.4
2,858,384	+				-0.0
2,858,384	+				+0.1
2,858,385	-				-0.9
2,858,385	-				-0.1
2,858,412	-				+2.0
2,858,417	+				-0.2
2,858,418	-				-0.1
2,858,418	-				+0.2
2,858,418	-				-1.0
2,858,418	-				-1.8
2,858,418	-				+0.9
2,858,418	-				-0.4
2,858,418	-				+0.1
2,858,471	+				+0.2
2,858,472	-				-0.7
2,858,472	-				+0.3
2,858,480	-				+0.3
2,858,480	-				-1.4
2,858,580	+				-0.4
2,858,585	+				-1.0
2,858,586	-				-0.7
2,858,591	-				+0.6
2,858,591	-				+1.3
2,858,591	-				-0.6
2,858,593	+				+0.6
2,858,593	+				+0.3
2,858,593	+				+0.6
2,858,677	+				-2.0
2,858,690	+				-0.8
2,858,691	-				+1.9
2,858,691	-				+0.3
2,858,719	+				-0.7
2,858,724	+				+0.2
2,858,724	+				+1.0
2,858,724	+				-0.6
2,858,724	+				-0.4
2,858,724	+				-0.2
2,858,724	+				+0.0
2,858,725	-				-0.2
2,858,725	-				+0.8
2,858,725	-				-0.9
2,858,805	+		DZA65_RS13345	0.12	-0.3
2,858,805	+		DZA65_RS13345	0.12	-0.5
2,858,805	+		DZA65_RS13345	0.12	-1.2
2,858,805	+		DZA65_RS13345	0.12	+0.8
2,858,805	+		DZA65_RS13345	0.12	-1.2
2,858,806	-		DZA65_RS13345	0.12	-0.6
2,858,806	-		DZA65_RS13345	0.12	+0.2
2,858,806	-		DZA65_RS13345	0.12	-0.8
2,858,807	+		DZA65_RS13345	0.12	-1.1
2,858,808	-		DZA65_RS13345	0.12	-0.7
2,858,808	-		DZA65_RS13345	0.12	-0.7
2,858,808	-		DZA65_RS13345	0.12	-0.4
2,858,808	-		DZA65_RS13345	0.12	-0.1
2,858,864	+		DZA65_RS13345	0.19	-0.4
2,858,865	-		DZA65_RS13345	0.19	-0.1
2,858,865	-		DZA65_RS13345	0.19	-0.2
2,858,869	+		DZA65_RS13345	0.20	-0.7
2,858,869	+		DZA65_RS13345	0.20	-0.0
2,858,869	+		DZA65_RS13345	0.20	-1.1
2,858,869	+		DZA65_RS13345	0.20	-0.3
2,858,869	+		DZA65_RS13345	0.20	-0.2
2,858,869	+		DZA65_RS13345	0.20	+1.1
2,858,869	+		DZA65_RS13345	0.20	-1.5
2,858,869	+		DZA65_RS13345	0.20	-0.2
2,858,869	+		DZA65_RS13345	0.20	-0.6
2,858,870	-		DZA65_RS13345	0.20	-0.1
2,858,870	-		DZA65_RS13345	0.20	-0.4
2,858,870	-		DZA65_RS13345	0.20	-1.0
2,858,870	-		DZA65_RS13345	0.20	-0.1
2,858,870	-		DZA65_RS13345	0.20	-0.8
2,858,870	-		DZA65_RS13345	0.20	-1.0
2,858,870	-		DZA65_RS13345	0.20	-0.3
2,858,870	-		DZA65_RS13345	0.20	-0.8
2,858,870	-		DZA65_RS13345	0.20	+0.2
2,858,870	-		DZA65_RS13345	0.20	+0.2
2,858,870	-		DZA65_RS13345	0.20	-0.6
2,858,870	-		DZA65_RS13345	0.20	-0.3
2,858,871	+		DZA65_RS13345	0.20	+0.4
2,858,871	+		DZA65_RS13345	0.20	-1.8
2,858,871	+		DZA65_RS13345	0.20	-0.4
2,858,871	+		DZA65_RS13345	0.20	-0.2
2,858,871	+		DZA65_RS13345	0.20	+0.1
2,858,871	+		DZA65_RS13345	0.20	-0.5
2,858,872	-		DZA65_RS13345	0.20	+0.1
2,858,872	-		DZA65_RS13345	0.20	+0.0
2,858,872	-		DZA65_RS13345	0.20	-0.2
2,858,872	-		DZA65_RS13345	0.20	-0.8
2,858,872	-		DZA65_RS13345	0.20	-2.7
2,858,872	-		DZA65_RS13345	0.20	-0.1
2,858,872	-		DZA65_RS13345	0.20	-0.4
2,858,872	-		DZA65_RS13345	0.20	-0.2
2,858,872	-		DZA65_RS13345	0.20	-1.3
2,858,872	-		DZA65_RS13345	0.20	-1.2
2,858,904	+		DZA65_RS13345	0.24	+0.6
2,858,904	+		DZA65_RS13345	0.24	-0.9
2,858,904	+		DZA65_RS13345	0.24	+0.3
2,858,904	+		DZA65_RS13345	0.24	+0.1
2,858,905	-		DZA65_RS13345	0.24	+0.3
2,858,905	-		DZA65_RS13345	0.24	-0.6
2,858,933	+		DZA65_RS13345	0.28	-1.0
2,859,069	+		DZA65_RS13345	0.44	-0.3
2,859,069	+		DZA65_RS13345	0.44	+1.3
2,859,069	+		DZA65_RS13345	0.44	-0.3
2,859,070	-		DZA65_RS13345	0.44	-0.4
2,859,081	-		DZA65_RS13345	0.46	+0.0
2,859,198	+		DZA65_RS13345	0.60	+0.2
2,859,199	-		DZA65_RS13345	0.60	-1.0
2,859,234	+		DZA65_RS13345	0.64	-0.3
2,859,234	+		DZA65_RS13345	0.64	+1.0
2,859,234	+		DZA65_RS13345	0.64	-0.5
2,859,234	+		DZA65_RS13345	0.64	-1.6
2,859,235	-		DZA65_RS13345	0.64	-0.2
2,859,235	-		DZA65_RS13345	0.64	+0.6
2,859,235	-		DZA65_RS13345	0.64	-0.1
2,859,235	-		DZA65_RS13345	0.64	-0.5
2,859,235	-		DZA65_RS13345	0.64	+0.2
2,859,235	-		DZA65_RS13345	0.64	-1.0
2,859,452	+				+0.1
2,859,458	+				-1.0
2,859,458	+				-1.2
2,859,459	-				-0.4
2,859,459	-				+1.2
2,859,462	+				-0.3
2,859,463	-				-0.7
2,859,463	-				+0.2
2,859,463	-				-1.6
2,859,491	+				-0.0
2,859,518	+				+0.1
2,859,518	+				+0.3
2,859,518	+				+0.4
2,859,518	+				-0.2
2,859,518	+				-0.1
2,859,518	+				-0.2
2,859,518	+				+0.4
2,859,518	+				-0.2
2,859,518	+				-0.2
2,859,518	+				+1.8
2,859,519	-				-1.3
2,859,519	-				-0.2
2,859,519	-				-0.3
2,859,522	+				-0.3
2,859,522	+				-2.6
2,859,522	+				-2.4
2,859,522	+				+1.4
2,859,522	+				-0.3
2,859,522	+				-0.7
2,859,523	-				-0.6
2,859,523	-				-0.3
2,859,523	-				-0.5
2,859,523	-				+0.7
2,859,525	+				-0.2
2,859,525	+				+0.2
2,859,525	+				+0.3
2,859,525	+				+0.6
2,859,526	-				-0.1
2,859,526	-				-0.4
2,859,526	-				+0.1
2,859,534	+				-0.8
2,859,534	+				+0.1
2,859,534	+				-1.0
2,859,534	+				-1.2
2,859,534	+				-0.9
2,859,535	-				-0.4
2,859,535	-				+0.1
2,859,535	-				+1.2
2,859,535	-				-0.1
2,859,535	-				-0.1
2,859,538	+				-0.3
2,859,538	+				-0.0
2,859,538	+				+0.3
2,859,538	+				-1.2
2,859,538	+				-0.7
2,859,538	+				-0.8
2,859,538	+				+1.6
2,859,538	+				+0.2
2,859,539	-				-1.0
2,859,539	-				+0.1
2,859,539	-				+0.1
2,859,539	-				-0.5
2,859,539	-				+0.1
2,859,539	-				-0.2
2,859,539	-				-0.4
2,859,539	-				+0.9
2,859,539	-				-1.3
2,859,541	+				+0.4
2,859,542	-				-1.4
2,859,542	-				+0.1
2,859,542	-				+0.2
2,859,542	-				-0.2
2,859,671	-		DZA65_RS13350	0.32	-0.8
2,859,853	-				-2.8
2,859,907	+				+0.3
2,859,907	+				+0.2
2,859,960	+				-0.9
2,859,960	+				-0.1
2,859,961	-				+0.9
2,860,026	+				-0.7
2,860,026	+				+0.4
2,860,026	+				-0.0
2,860,026	+				+1.0
2,860,027	-				+0.6
2,860,033	+				+0.2
2,860,033	+				+1.0
2,860,034	-				-1.9
2,860,034	-				+0.1
2,860,034	-				-0.4
2,860,034	-				+0.9
2,860,034	-				-0.9
2,860,034	-				-0.7
2,860,035	+				+0.2
2,860,035	+				-1.9
2,860,035	+				+0.7
2,860,035	+				+1.2
2,860,036	-				-0.3
2,860,048	-				-0.9
2,860,054	-				+0.6
2,860,055	+				+0.0
2,860,055	+				-0.1
2,860,055	+				+2.0
2,860,055	+				+0.4
2,860,055	+				+0.5
2,860,055	+				-0.5
2,860,056	-				-0.4
2,860,171	-		DZA65_RS13355	0.15	+0.1
2,860,198	+		DZA65_RS13355	0.20	-0.0
2,860,225	+		DZA65_RS13355	0.24	-0.2
2,860,226	-		DZA65_RS13355	0.24	-0.3
2,860,443	+		DZA65_RS13355	0.63	+0.2
2,860,443	+		DZA65_RS13355	0.63	+0.0
2,860,443	+		DZA65_RS13355	0.63	+0.1
2,860,444	-		DZA65_RS13355	0.63	-0.0
2,860,444	-		DZA65_RS13355	0.63	-0.6
2,860,449	-		DZA65_RS13355	0.64	+1.7