Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12850

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,753,076	+		DZA65_RS22920	0.44	-0.6
2,753,077	-		DZA65_RS22920	0.44	-0.1
2,753,077	-		DZA65_RS22920	0.44	+0.7
2,753,158	-		DZA65_RS22920	0.50	+0.7
2,753,178	-		DZA65_RS22920	0.51	-0.4
2,753,288	+		DZA65_RS22920	0.59	+1.0
2,753,324	+		DZA65_RS22920	0.61	+0.3
2,753,324	+		DZA65_RS22920	0.61	+0.7
2,753,325	-		DZA65_RS22920	0.61	-0.8
2,753,328	+		DZA65_RS22920	0.62	-1.0
2,753,328	+		DZA65_RS22920	0.62	-2.9
2,753,328	+		DZA65_RS22920	0.62	-2.4
2,753,329	-		DZA65_RS22920	0.62	-1.6
2,753,329	-		DZA65_RS22920	0.62	+1.7
2,753,371	+		DZA65_RS22920	0.65	-1.2
2,753,371	+		DZA65_RS22920	0.65	-0.2
2,753,382	-		DZA65_RS22920	0.65	+0.2
2,753,417	+		DZA65_RS22920	0.68	-0.7
2,753,421	+		DZA65_RS22920	0.68	-1.5
2,753,421	+		DZA65_RS22920	0.68	+1.2
2,753,421	+		DZA65_RS22920	0.68	+0.2
2,753,422	-		DZA65_RS22920	0.68	-0.3
2,753,422	-		DZA65_RS22920	0.68	+0.4
2,753,423	+		DZA65_RS22920	0.68	-1.5
2,753,423	+		DZA65_RS22920	0.68	-0.4
2,753,424	-		DZA65_RS22920	0.68	+1.8
2,753,424	-		DZA65_RS22920	0.68	+0.4
2,753,424	-		DZA65_RS22920	0.68	-0.0
2,753,424	-		DZA65_RS22920	0.68	+0.3
2,753,465	+		DZA65_RS22920	0.71	-2.0
2,753,465	+		DZA65_RS22920	0.71	+0.1
2,753,466	-		DZA65_RS22920	0.71	+0.6
2,753,466	-		DZA65_RS22920	0.71	+0.2
2,753,468	+		DZA65_RS22920	0.71	-0.9
2,753,468	+		DZA65_RS22920	0.71	+0.6
2,753,468	+		DZA65_RS22920	0.71	-0.4
2,753,488	-				-0.0
2,753,490	+		DZA65_RS22920	0.73	-1.4
2,753,490	+		DZA65_RS22920	0.73	-0.5
2,753,491	-		DZA65_RS22920	0.73	+0.1
2,753,491	-		DZA65_RS22920	0.73	+0.4
2,753,592	-		DZA65_RS22920	0.80	-0.2
2,753,594	+		DZA65_RS22920	0.80	-0.0
2,753,601	+		DZA65_RS22920	0.80	-1.6
2,753,604	-		DZA65_RS22920	0.81	-0.6
2,753,604	-		DZA65_RS22920	0.81	-0.9
2,753,712	-		DZA65_RS22920	0.88	-0.6
2,753,789	+				+0.2
2,753,790	-				+0.1
2,753,852	+				-0.0
2,753,853	-				-1.1
2,753,855	+				+0.4
2,753,855	+				+0.4
2,753,875	-				-1.6
2,753,877	+				-0.4
2,753,877	+				-0.3
2,753,883	-				+0.2
2,753,883	-				+0.6
2,753,885	-				-0.4
2,753,885	-				+0.1
2,753,944	+				-0.3
2,753,945	-				+0.8
2,753,976	+				-0.7
2,753,977	-				-0.8
2,753,977	-				-0.4
2,753,982	+				-2.4
2,753,982	+				-0.6
2,753,983	-				+0.3
2,753,983	-				+0.6
2,753,983	-				-0.3
2,754,076	+				-0.3
2,754,077	-				+0.1
2,754,077	-				-0.8
2,754,138	+		DZA65_RS12850	0.10	-2.8
2,754,138	+		DZA65_RS12850	0.10	+0.8
2,754,139	-		DZA65_RS12850	0.11	-0.2
2,754,139	-		DZA65_RS12850	0.11	+0.1
2,754,141	+		DZA65_RS12850	0.11	+0.1
2,754,146	+		DZA65_RS12850	0.11	+0.4
2,754,146	+		DZA65_RS12850	0.11	-0.7
2,754,146	+		DZA65_RS12850	0.11	+0.9
2,754,146	+		DZA65_RS12850	0.11	-0.4
2,754,146	+		DZA65_RS12850	0.11	-0.6
2,754,146	+		DZA65_RS12850	0.11	-1.0
2,754,147	-		DZA65_RS12850	0.11	+0.1
2,754,147	-		DZA65_RS12850	0.11	-0.2
2,754,147	-		DZA65_RS12850	0.11	-0.2
2,754,147	-		DZA65_RS12850	0.11	-1.0
2,754,147	-		DZA65_RS12850	0.11	-0.7
2,754,147	-		DZA65_RS12850	0.11	-0.4
2,754,147	-		DZA65_RS12850	0.11	-0.0
2,754,147	-		DZA65_RS12850	0.11	-1.8
2,754,147	-		DZA65_RS12850	0.11	-0.6
2,754,147	-		DZA65_RS12850	0.11	-0.7
2,754,196	+		DZA65_RS12850	0.17	+0.7
2,754,196	+		DZA65_RS12850	0.17	+1.4
2,754,196	+		DZA65_RS12850	0.17	-1.9
2,754,196	+		DZA65_RS12850	0.17	+0.3
2,754,196	+		DZA65_RS12850	0.17	+0.4
2,754,196	+		DZA65_RS12850	0.17	+0.8
2,754,196	+		DZA65_RS12850	0.17	+0.1
2,754,196	+		DZA65_RS12850	0.17	-0.4
2,754,196	+		DZA65_RS12850	0.17	+0.3
2,754,196	+		DZA65_RS12850	0.17	-0.2
2,754,196	+		DZA65_RS12850	0.17	+0.7
2,754,196	+		DZA65_RS12850	0.17	-0.2
2,754,196	+		DZA65_RS12850	0.17	-0.1
2,754,197	-		DZA65_RS12850	0.17	-0.9
2,754,197	-		DZA65_RS12850	0.17	+0.2
2,754,197	-		DZA65_RS12850	0.17	-0.4
2,754,197	-		DZA65_RS12850	0.17	-0.4
2,754,197	-		DZA65_RS12850	0.17	+0.5
2,754,197	-		DZA65_RS12850	0.17	-0.0
2,754,197	-		DZA65_RS12850	0.17	+0.1
2,754,197	-		DZA65_RS12850	0.17	-0.0
2,754,197	-		DZA65_RS12850	0.17	+0.6
2,754,197	-		DZA65_RS12850	0.17	+0.2
2,754,197	-		DZA65_RS12850	0.17	-2.0
2,754,197	-		DZA65_RS12850	0.17	+0.1
2,754,197	-		DZA65_RS12850	0.17	-0.2
2,754,198	+		DZA65_RS12850	0.17	-1.1
2,754,198	+		DZA65_RS12850	0.17	-0.5
2,754,198	+		DZA65_RS12850	0.17	-0.4
2,754,198	+		DZA65_RS12850	0.17	-0.8
2,754,199	-		DZA65_RS12850	0.17	+0.4
2,754,199	-		DZA65_RS12850	0.17	+0.6
2,754,199	-		DZA65_RS12850	0.17	+0.6
2,754,199	-		DZA65_RS12850	0.17	+0.4
2,754,199	-		DZA65_RS12850	0.17	+0.2
2,754,199	-		DZA65_RS12850	0.17	+0.2
2,754,199	-		DZA65_RS12850	0.17	-1.7
2,754,314	-		DZA65_RS12850	0.29	+0.6
2,754,337	+		DZA65_RS12850	0.32	-1.2
2,754,338	-		DZA65_RS12850	0.32	-1.3
2,754,338	-		DZA65_RS12850	0.32	+0.3
2,754,357	+		DZA65_RS12850	0.34	-0.6
2,754,357	+		DZA65_RS12850	0.34	-0.4
2,754,358	-		DZA65_RS12850	0.34	-1.0
2,754,358	-		DZA65_RS12850	0.34	+0.8
2,754,361	+		DZA65_RS12850	0.34	-0.3
2,754,361	+		DZA65_RS12850	0.34	-1.6
2,754,362	-		DZA65_RS12850	0.34	+2.8
2,754,362	-		DZA65_RS12850	0.34	+0.9
2,754,393	+		DZA65_RS12850	0.37	-0.6
2,754,393	+		DZA65_RS12850	0.37	-1.4
2,754,394	-		DZA65_RS12850	0.38	+1.0
2,754,394	-		DZA65_RS12850	0.38	-2.6
2,754,394	-		DZA65_RS12850	0.38	+0.4
2,754,394	-		DZA65_RS12850	0.38	-1.0
2,754,394	-		DZA65_RS12850	0.38	-1.0
2,754,399	+		DZA65_RS12850	0.38	-0.5
2,754,399	+		DZA65_RS12850	0.38	-0.4
2,754,399	+		DZA65_RS12850	0.38	+0.1
2,754,399	+		DZA65_RS12850	0.38	-0.6
2,754,399	+		DZA65_RS12850	0.38	+0.6
2,754,400	-		DZA65_RS12850	0.38	-1.6
2,754,400	-		DZA65_RS12850	0.38	-0.2
2,754,400	-		DZA65_RS12850	0.38	+0.9
2,754,522	+		DZA65_RS12850	0.51	-0.1
2,754,522	+		DZA65_RS12850	0.51	+2.2
2,754,523	-		DZA65_RS12850	0.51	-1.0
2,754,523	-		DZA65_RS12850	0.51	-0.8
2,754,523	-		DZA65_RS12850	0.51	-1.7
2,754,529	+		DZA65_RS12850	0.52	-2.2
2,754,607	+		DZA65_RS12850	0.60	-0.4
2,754,607	+		DZA65_RS12850	0.60	+1.7
2,754,669	+		DZA65_RS12850	0.67	-0.3
2,754,669	+		DZA65_RS12850	0.67	-0.6
2,754,669	+		DZA65_RS12850	0.67	-2.2
2,754,670	-		DZA65_RS12850	0.67	+0.3
2,754,670	-		DZA65_RS12850	0.67	-0.4
2,754,896	+				-1.4
2,754,896	+				-0.3
2,754,936	+				+0.7
2,754,937	-				+0.1
2,754,937	-				+0.6
2,754,960	-				+0.6
2,754,966	-				-0.2
2,754,980	-				-0.4
2,754,980	-				+0.3
2,755,026	-				-1.4
2,755,026	-				+0.3
2,755,118	-				-1.0
2,755,166	-				+0.6
2,755,166	-				-0.2
2,755,166	-				-0.0
2,755,166	-				-0.8
2,755,174	+				-0.7
2,755,174	+				-1.2
2,755,175	-				-0.3
2,755,175	-				-0.4
2,755,175	-				+0.2
2,755,175	-				-0.4
2,755,182	-				+0.9
2,755,198	+				+0.4
2,755,198	+				-0.4
2,755,199	-				-0.4
2,755,199	-				-1.2
2,755,206	+				+0.4
2,755,206	+				-0.3
2,755,257	-				+0.2
2,755,362	+				+0.8
2,755,363	-				+0.7
2,755,376	+				-2.2
2,755,377	-				+0.6
2,755,387	-				+0.8
2,755,546	+		DZA65_RS12860	0.18	-0.4
2,755,546	+		DZA65_RS12860	0.18	-0.6
2,755,547	-		DZA65_RS12860	0.18	+0.6
2,755,547	-		DZA65_RS12860	0.18	+1.8
2,755,547	-		DZA65_RS12860	0.18	-1.7
2,755,547	-		DZA65_RS12860	0.18	-0.1
2,755,550	+		DZA65_RS12860	0.19	+1.4
2,755,550	+		DZA65_RS12860	0.19	+0.8
2,755,551	-		DZA65_RS12860	0.19	-0.8
2,755,551	-		DZA65_RS12860	0.19	-0.3
2,755,551	-		DZA65_RS12860	0.19	+0.1
2,755,670	+		DZA65_RS12860	0.31	-0.2
2,755,750	+		DZA65_RS12860	0.39	-0.4
2,755,750	+		DZA65_RS12860	0.39	-0.0
2,755,751	-		DZA65_RS12860	0.39	+0.6
2,755,842	-		DZA65_RS12860	0.48	-0.4
2,755,842	-		DZA65_RS12860	0.48	+0.6
2,755,854	+		DZA65_RS12860	0.50	+1.6
2,755,854	+		DZA65_RS12860	0.50	-2.0
2,755,854	+		DZA65_RS12860	0.50	-0.1
2,755,855	-		DZA65_RS12860	0.50	-2.0
2,755,855	-		DZA65_RS12860	0.50	+0.1
2,755,855	-		DZA65_RS12860	0.50	+0.1
2,755,902	-		DZA65_RS12860	0.54	-0.2
2,755,902	-		DZA65_RS12860	0.54	-0.2
2,755,977	+		DZA65_RS12860	0.62	+0.8
2,755,977	+		DZA65_RS12860	0.62	-0.9