Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10810

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,285,891	-		DZA65_RS10800	0.17	-1.2
2,285,940	-		DZA65_RS10800	0.25	-0.0
2,285,969	+		DZA65_RS10800	0.30	-1.3
2,285,969	+		DZA65_RS10800	0.30	-0.8
2,285,969	+		DZA65_RS10800	0.30	-0.7
2,285,969	+		DZA65_RS10800	0.30	+0.7
2,285,969	+		DZA65_RS10800	0.30	+0.2
2,285,969	+		DZA65_RS10800	0.30	-0.3
2,285,969	+		DZA65_RS10800	0.30	-0.2
2,285,970	-		DZA65_RS10800	0.30	-1.5
2,285,970	-		DZA65_RS10800	0.30	-0.0
2,285,970	-		DZA65_RS10800	0.30	-0.9
2,285,970	-		DZA65_RS10800	0.30	-1.1
2,285,970	-		DZA65_RS10800	0.30	+1.0
2,285,971	+		DZA65_RS10800	0.30	-0.1
2,285,971	+		DZA65_RS10800	0.30	+0.1
2,285,971	+		DZA65_RS10800	0.30	+0.3
2,285,972	-		DZA65_RS10800	0.30	+1.7
2,285,972	-		DZA65_RS10800	0.30	-0.3
2,285,972	-		DZA65_RS10800	0.30	+0.4
2,285,972	-		DZA65_RS10800	0.30	+0.3
2,285,972	-		DZA65_RS10800	0.30	-0.5
2,285,972	-		DZA65_RS10800	0.30	+0.4
2,285,975	+		DZA65_RS10800	0.31	+1.3
2,285,975	+		DZA65_RS10800	0.31	-0.2
2,285,975	+		DZA65_RS10800	0.31	-0.5
2,285,976	-		DZA65_RS10800	0.31	+0.3
2,285,976	-		DZA65_RS10800	0.31	-0.8
2,285,976	-		DZA65_RS10800	0.31	-1.2
2,285,976	-		DZA65_RS10800	0.31	+0.1
2,285,976	-		DZA65_RS10800	0.31	-0.4
2,285,976	-		DZA65_RS10800	0.31	+0.5
2,286,079	+		DZA65_RS10800	0.48	-0.7
2,286,079	+		DZA65_RS10800	0.48	-1.0
2,286,080	-		DZA65_RS10800	0.48	+0.9
2,286,080	-		DZA65_RS10800	0.48	+0.1
2,286,080	-		DZA65_RS10800	0.48	-1.4
2,286,080	-		DZA65_RS10800	0.48	-0.8
2,286,086	-		DZA65_RS10800	0.49	-1.2
2,286,148	+		DZA65_RS10800	0.59	+0.1
2,286,148	+		DZA65_RS10800	0.59	+0.2
2,286,148	+		DZA65_RS10800	0.59	+1.3
2,286,148	+		DZA65_RS10800	0.59	+0.2
2,286,158	-		DZA65_RS10800	0.60	-0.1
2,286,174	+		DZA65_RS10800	0.63	-1.4
2,286,181	+		DZA65_RS10800	0.64	-0.9
2,286,181	+		DZA65_RS10800	0.64	-0.2
2,286,224	+		DZA65_RS10800	0.71	-1.1
2,286,224	+		DZA65_RS10800	0.71	-0.1
2,286,224	+		DZA65_RS10800	0.71	+0.8
2,286,224	+		DZA65_RS10800	0.71	+0.6
2,286,224	+		DZA65_RS10800	0.71	+0.2
2,286,224	+		DZA65_RS10800	0.71	-0.1
2,286,225	-		DZA65_RS10800	0.71	+0.0
2,286,225	-		DZA65_RS10800	0.71	-0.8
2,286,225	-				+1.4
2,286,294	+		DZA65_RS10800	0.82	+2.2
2,286,295	-		DZA65_RS10800	0.82	+0.8
2,286,325	-		DZA65_RS10800	0.87	+0.7
2,286,377	+				-1.5
2,286,377	+				-0.3
2,286,377	+				-0.6
2,286,377	+				+0.2
2,286,377	+				+1.9
2,286,377	+				+0.6
2,286,377	+				+0.2
2,286,377	+				-0.6
2,286,377	+				+0.2
2,286,378	-				+0.1
2,286,378	-				-1.1
2,286,378	-				+0.7
2,286,378	-				-0.5
2,286,378	-				+0.9
2,286,378	-				-0.8
2,286,378	-				-0.0
2,286,379	+				+1.5
2,286,379	+				-0.1
2,286,379	+				-1.3
2,286,380	-				+2.1
2,286,380	-				-0.7
2,286,380	-				-1.2
2,286,380	-				-0.3
2,286,380	-				+0.8
2,286,401	+				-1.5
2,286,401	+				-0.9
2,286,402	-				-0.1
2,286,421	+				-0.6
2,286,422	-				+0.8
2,286,447	+				-1.3
2,286,447	+				-2.4
2,286,452	+				-0.1
2,286,502	+				+0.4
2,286,503	-				-1.2
2,286,702	-				-0.5
2,286,720	+				-0.4
2,286,720	+				+0.2
2,286,721	-				-0.1
2,286,802	+				-0.8
2,286,832	+				-1.4
2,286,832	+				-1.5
2,286,833	-				-1.0
2,286,833	-				-1.1
2,286,837	+				-1.5
2,286,837	+				-1.4
2,286,838	-				-2.5
2,286,841	-				-0.1
2,286,854	+				-0.5
2,286,884	+				-0.5
2,286,884	+				-1.5
2,286,884	+				-2.3
2,286,885	-				-1.1
2,286,885	-				-0.1
2,286,885	-				-1.8
2,286,885	-				-2.4
2,286,885	-				-0.5
2,286,950	+		DZA65_RS10810	0.15	-1.7
2,286,950	+		DZA65_RS10810	0.15	-1.3
2,286,950	+		DZA65_RS10810	0.15	-0.7
2,286,950	+		DZA65_RS10810	0.15	-0.2
2,286,950	+		DZA65_RS10810	0.15	-1.2
2,286,951	-		DZA65_RS10810	0.15	-3.3
2,286,951	-		DZA65_RS10810	0.15	-0.8
2,286,951	-		DZA65_RS10810	0.15	-1.9
2,286,951	-		DZA65_RS10810	0.15	-0.7
2,286,951	-		DZA65_RS10810	0.15	-0.1
2,286,951	-		DZA65_RS10810	0.15	-0.2
2,287,012	+		DZA65_RS10810	0.22	-1.6
2,287,013	-		DZA65_RS10810	0.22	-1.5
2,287,016	+		DZA65_RS10810	0.22	-0.7
2,287,016	+		DZA65_RS10810	0.22	-1.5
2,287,017	-		DZA65_RS10810	0.22	-2.2
2,287,056	-		DZA65_RS10810	0.27	-0.8
2,287,056	-		DZA65_RS10810	0.27	-0.4
2,287,166	+		DZA65_RS10810	0.40	-1.6
2,287,166	+		DZA65_RS10810	0.40	-2.0
2,287,167	-		DZA65_RS10810	0.40	-2.5
2,287,167	-		DZA65_RS10810	0.40	-2.7
2,287,167	-		DZA65_RS10810	0.40	-1.1
2,287,167	-				-0.5
2,287,184	+		DZA65_RS10810	0.42	-2.4
2,287,184	+		DZA65_RS10810	0.42	-0.5
2,287,184	+		DZA65_RS10810	0.42	-2.3
2,287,184	+		DZA65_RS10810	0.42	-1.6
2,287,185	-		DZA65_RS10810	0.42	-1.4
2,287,185	-		DZA65_RS10810	0.42	-0.2
2,287,185	-		DZA65_RS10810	0.42	-1.1
2,287,196	+		DZA65_RS10810	0.43	-1.1
2,287,352	+		DZA65_RS10810	0.62	-1.3
2,287,503	+		DZA65_RS10810	0.79	-2.8
2,287,503	+		DZA65_RS10810	0.79	-2.2
2,287,553	+		DZA65_RS10810	0.85	-1.3
2,287,553	+		DZA65_RS10810	0.85	-1.1
2,287,553	+		DZA65_RS10810	0.85	-2.1
2,287,554	-		DZA65_RS10810	0.85	+0.1
2,287,554	-		DZA65_RS10810	0.85	-0.5
2,287,554	-		DZA65_RS10810	0.85	-0.8
2,287,554	-		DZA65_RS10810	0.85	-0.9
2,287,589	+		DZA65_RS10810	0.90	-1.4
2,287,590	-		DZA65_RS10810	0.90	-2.3
2,287,702	+				-2.3
2,287,703	-				+0.3
2,287,703	-				+0.5
2,287,745	-				-1.7
2,287,745	-				+0.7
2,287,748	+				-1.1
2,287,748	+				-1.5
2,287,748	+				-0.6
2,287,748	+				-1.6
2,287,749	-				+0.2
2,287,749	-				+0.7
2,287,749	-				+1.8
2,287,754	+				-1.8
2,287,754	+				-1.4
2,287,754	+				-1.7
2,287,755	-				+0.2
2,287,757	+				-0.1
2,287,757	+				+0.2
2,287,758	-				-0.5
2,287,758	-				-0.3
2,287,758	-				+0.5
2,287,758	-				-0.2
2,287,758	-				+0.3
2,287,758	-				+1.1
2,287,758	-				-0.1
2,287,844	+		DZA65_RS10815	0.19	-0.9
2,287,844	+		DZA65_RS10815	0.19	-1.5
2,287,844	+		DZA65_RS10815	0.19	-0.6
2,287,844	+		DZA65_RS10815	0.19	-0.5
2,287,844	+		DZA65_RS10815	0.19	-1.2
2,287,844	+		DZA65_RS10815	0.19	-0.8
2,287,844	+		DZA65_RS10815	0.19	-0.5
2,287,844	+		DZA65_RS10815	0.19	+0.0
2,287,845	-		DZA65_RS10815	0.19	-0.5
2,287,845	-		DZA65_RS10815	0.19	-0.3
2,287,845	-		DZA65_RS10815	0.19	-0.4
2,287,845	-		DZA65_RS10815	0.19	+0.3
2,287,845	-		DZA65_RS10815	0.19	-1.1
2,287,845	-		DZA65_RS10815	0.19	+0.1
2,287,845	-		DZA65_RS10815	0.19	-0.6
2,287,845	-		DZA65_RS10815	0.19	+0.0
2,287,845	-		DZA65_RS10815	0.19	-1.0
2,287,845	-		DZA65_RS10815	0.19	+0.2
2,287,845	-		DZA65_RS10815	0.19	-0.0
2,287,845	-		DZA65_RS10815	0.19	-1.0
2,287,845	-		DZA65_RS10815	0.19	-1.0
2,287,845	-		DZA65_RS10815	0.19	+0.4
2,287,847	+		DZA65_RS10815	0.19	-0.4
2,287,847	+		DZA65_RS10815	0.19	-1.3
2,287,847	+		DZA65_RS10815	0.19	-1.8
2,287,847	+		DZA65_RS10815	0.19	-0.7
2,287,847	+		DZA65_RS10815	0.19	-1.3
2,287,848	-		DZA65_RS10815	0.20	+1.4
2,287,848	-		DZA65_RS10815	0.20	-1.8
2,287,946	+		DZA65_RS10815	0.41	-0.9
2,287,984	+		DZA65_RS10815	0.49	-0.1
2,287,985	-		DZA65_RS10815	0.49	-0.6
2,288,082	-		DZA65_RS10815	0.70	-1.0
2,288,102	+		DZA65_RS10815	0.74	-0.8
2,288,102	+		DZA65_RS10815	0.74	+1.3
2,288,102	+		DZA65_RS10815	0.74	-1.3
2,288,103	-		DZA65_RS10815	0.74	-0.9
2,288,103	-		DZA65_RS10815	0.74	-0.4
2,288,109	+		DZA65_RS10815	0.75	-0.0
2,288,109	+		DZA65_RS10815	0.75	+0.0
2,288,109	+		DZA65_RS10815	0.75	-0.2
2,288,110	-		DZA65_RS10815	0.76	-0.4
2,288,166	-		DZA65_RS10815	0.88	+0.2
2,288,186	+				+1.1
2,288,187	-				+0.5
2,288,226	+				+1.2
2,288,226	+				+0.2
2,288,226	+				+0.5
2,288,227	-				+0.6
2,288,227	-				+0.5
2,288,227	-				-0.7
2,288,248	+				+0.3
2,288,249	-				+0.4
2,288,249	-				+1.2
2,288,254	+				+1.2
2,288,254	+				+0.9
2,288,254	+				-0.7
2,288,258	+				-0.1
2,288,259	-				-0.3
2,288,288	+				+0.9
2,288,288	+				+0.5
2,288,288	+				+0.5
2,288,288	+				+1.4
2,288,288	+				+2.8
2,288,288	+				+1.5
2,288,293	+				-0.5
2,288,294	-				-0.1
2,288,319	+				+1.6
2,288,320	-				-0.1
2,288,336	+				+1.6
2,288,336	+				+0.1
2,288,336	+				+0.2
2,288,336	+				+0.9
2,288,336	+				+1.3
2,288,337	-				+0.3
2,288,340	+				-0.4
2,288,340	+				+0.6
2,288,340	+				-0.1
2,288,340	+				+0.2
2,288,340	+				-0.2
2,288,340	+				-1.1
2,288,340	+				+0.8
2,288,340	+				-0.2
2,288,340	+				-0.5
2,288,340	+				+0.3
2,288,340	+				+0.1
2,288,341	-				-0.2
2,288,341	-				-0.5
2,288,341	-				-0.8
2,288,341	-				-0.6
2,288,341	-				-0.7
2,288,341	-				-0.1
2,288,341	-				-1.1
2,288,341	-				-0.1
2,288,363	+				+0.1
2,288,363	+				+0.2
2,288,363	+				+0.2
2,288,363	+				+0.2
2,288,363	+				+1.8
2,288,363	+				+0.6
2,288,364	-				-0.7
2,288,364	-				-0.5
2,288,364	-				-1.2
2,288,393	+				+0.2
2,288,393	+				+1.2
2,288,393	+				+1.3
2,288,393	+				+0.1
2,288,394	-				+0.5
2,288,397	+				-0.2
2,288,397	+				-0.1
2,288,443	-				+0.9
2,288,531	-		DZA65_RS10820	0.16	+0.7
2,288,531	-		DZA65_RS10820	0.16	-0.2
2,288,631	-		DZA65_RS10820	0.27	-0.6
2,288,631	-		DZA65_RS10820	0.27	+1.0
2,288,660	+		DZA65_RS10820	0.31	+0.2
2,288,660	+		DZA65_RS10820	0.31	+0.1
2,288,660	+		DZA65_RS10820	0.31	+1.1
2,288,660	+		DZA65_RS10820	0.31	+0.1
2,288,661	-		DZA65_RS10820	0.31	+0.3
2,288,661	-		DZA65_RS10820	0.31	-1.3
2,288,661	-		DZA65_RS10820	0.31	-0.0
2,288,661	-		DZA65_RS10820	0.31	-1.1
2,288,661	-		DZA65_RS10820	0.31	-1.8
2,288,661	-		DZA65_RS10820	0.31	-1.4
2,288,661	-		DZA65_RS10820	0.31	-0.7
2,288,672	+		DZA65_RS10820	0.32	+1.9
2,288,672	+		DZA65_RS10820	0.32	+0.3
2,288,676	+		DZA65_RS10820	0.32	+0.9
2,288,676	+		DZA65_RS10820	0.32	+1.5
2,288,676	+		DZA65_RS10820	0.32	+0.0
2,288,676	+		DZA65_RS10820	0.32	+0.8
2,288,677	-		DZA65_RS10820	0.33	-0.5
2,288,677	-		DZA65_RS10820	0.33	-0.1
2,288,677	-		DZA65_RS10820	0.33	-0.1