Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09160

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,932,148	+		DZA65_RS09155	0.69	-0.6
1,932,149	-		DZA65_RS09155	0.69	-0.6
1,932,212	-		DZA65_RS09155	0.72	-0.1
1,932,499	+		DZA65_RS09155	0.85	-0.3
1,932,500	-		DZA65_RS09155	0.85	+1.2
1,932,500	-		DZA65_RS09155	0.85	+0.3
1,932,707	+				+0.1
1,932,707	+				-1.4
1,932,707	+				+0.9
1,932,707	+				-0.8
1,932,707	+				+0.1
1,932,708	-				+0.2
1,932,708	-				+0.6
1,932,708	-				+0.2
1,932,708	-				-0.4
1,932,708	-				+0.0
1,932,803	+				-1.7
1,932,803	+				-1.2
1,932,803	+				+0.6
1,932,803	+				+0.9
1,932,803	+				-0.5
1,932,803	+				-0.9
1,932,804	-				+1.3
1,932,804	-				+0.4
1,932,804	-				-0.4
1,932,831	+				+0.2
1,932,831	+				+0.2
1,932,832	-				-1.2
1,932,844	+				-2.2
1,932,926	+				-0.2
1,932,926	+				+1.6
1,932,926	+				-1.4
1,932,926	+				-0.1
1,932,927	-				+0.0
1,932,927	-				-1.2
1,932,927	-				+0.4
1,933,027	+				-0.6
1,933,027	+				+0.9
1,933,027	+				-0.1
1,933,028	-				-0.3
1,933,028	-				-1.3
1,933,096	+				-0.7
1,933,096	+				+0.4
1,933,097	-				-0.2
1,933,097	-				+0.1
1,933,105	+				+0.0
1,933,105	+				-0.1
1,933,105	+				-1.4
1,933,105	+				-1.0
1,933,105	+				-2.0
1,933,105	+				-1.2
1,933,105	+				-0.6
1,933,105	+				+0.2
1,933,105	+				-1.2
1,933,105	+				+0.0
1,933,105	+				-1.6
1,933,105	+				+1.0
1,933,105	+				+0.4
1,933,105	+				-0.1
1,933,105	+				+1.6
1,933,106	-				-0.1
1,933,106	-				+0.2
1,933,106	-				+0.4
1,933,106	-				-0.3
1,933,106	-				-0.9
1,933,106	-				-1.4
1,933,106	-				-0.5
1,933,106	-				-0.3
1,933,107	+				-0.2
1,933,107	+				+0.5
1,933,108	-				-0.3
1,933,108	-				+0.6
1,933,115	+				+0.6
1,933,115	+				-1.2
1,933,208	-		DZA65_RS09160	0.19	+0.3
1,933,232	+		DZA65_RS09160	0.22	+0.6
1,933,232	+		DZA65_RS09160	0.22	+1.2
1,933,232	+		DZA65_RS09160	0.22	-1.0
1,933,232	+		DZA65_RS09160	0.22	+0.0
1,933,232	+		DZA65_RS09160	0.22	-0.9
1,933,232	+		DZA65_RS09160	0.22	+0.6
1,933,232	+		DZA65_RS09160	0.22	-1.5
1,933,232	+		DZA65_RS09160	0.22	+0.7
1,933,232	+		DZA65_RS09160	0.22	-0.3
1,933,232	+		DZA65_RS09160	0.22	+0.2
1,933,233	-		DZA65_RS09160	0.22	+0.2
1,933,233	-		DZA65_RS09160	0.22	+0.1
1,933,282	+		DZA65_RS09160	0.27	-1.4
1,933,282	+				+2.2
1,933,282	+		DZA65_RS09160	0.27	-0.1
1,933,282	+		DZA65_RS09160	0.27	+0.8
1,933,282	+		DZA65_RS09160	0.27	+0.9
1,933,283	-		DZA65_RS09160	0.27	+0.4
1,933,283	-		DZA65_RS09160	0.27	-0.9
1,933,283	-		DZA65_RS09160	0.27	+0.4
1,933,283	-		DZA65_RS09160	0.27	+0.2
1,933,284	+		DZA65_RS09160	0.27	+0.1
1,933,284	+		DZA65_RS09160	0.27	+0.0
1,933,284	+		DZA65_RS09160	0.27	+1.0
1,933,285	-		DZA65_RS09160	0.27	-0.5
1,933,285	-		DZA65_RS09160	0.27	+0.6
1,933,305	+		DZA65_RS09160	0.29	+0.4
1,933,306	-		DZA65_RS09160	0.29	+0.2
1,933,485	+		DZA65_RS09160	0.48	-0.7
1,933,485	+		DZA65_RS09160	0.48	+0.1
1,933,486	-		DZA65_RS09160	0.48	+0.2
1,933,566	+		DZA65_RS09160	0.56	+0.4
1,933,567	-		DZA65_RS09160	0.56	-0.3
1,933,639	+		DZA65_RS09160	0.64	-1.4
1,933,639	+		DZA65_RS09160	0.64	-0.7
1,933,640	-		DZA65_RS09160	0.64	+0.2
1,933,640	-		DZA65_RS09160	0.64	+0.2
1,933,656	+		DZA65_RS09160	0.66	+1.7
1,933,717	+		DZA65_RS09160	0.72	+0.2
1,933,717	+		DZA65_RS09160	0.72	+1.1
1,933,717	+		DZA65_RS09160	0.72	+0.3
1,933,717	+		DZA65_RS09160	0.72	+0.1
1,933,717	+		DZA65_RS09160	0.72	+0.6
1,933,718	-		DZA65_RS09160	0.72	+0.1
1,933,718	-		DZA65_RS09160	0.72	-0.4
1,933,970	+				-0.3
1,934,000	+				-0.1
1,934,006	+				-0.5
1,934,006	+				+0.1
1,934,007	-				+0.3
1,934,007	-				+1.0
1,934,034	+				-0.6
1,934,034	+				-0.4
1,934,034	+				-0.0
1,934,041	+				-0.2
1,934,041	+				+0.3
1,934,065	+				-0.6
1,934,065	+				+0.6
1,934,065	+				+0.0
1,934,065	+				-0.9
1,934,065	+				+0.1
1,934,065	+				-0.1
1,934,065	+				+0.9
1,934,065	+				+0.4
1,934,066	-				+0.4
1,934,066	-				-1.4
1,934,066	-				+0.0
1,934,066	-				+0.6
1,934,066	-				-1.0
1,934,066	-				+0.4
1,934,066	-				+1.8
1,934,110	+				+0.1
1,934,110	+				+0.0
1,934,110	+				+0.1
1,934,110	+				+0.1
1,934,110	+				+0.3
1,934,110	+				+1.3
1,934,111	-				-0.2
1,934,111	-				+0.2
1,934,111	-				-0.3
1,934,111	-				+0.6
1,934,111	-				+1.4
1,934,112	+				-0.8
1,934,112	+				-2.0
1,934,179	-				-2.1
1,934,179	-				+0.8
1,934,348	+		DZA65_RS09165	0.17	-0.3
1,934,349	-		DZA65_RS09165	0.17	+0.8
1,934,349	-		DZA65_RS09165	0.17	+0.2
1,934,482	+		DZA65_RS09165	0.25	+0.7
1,934,599	+		DZA65_RS09165	0.31	+0.4
1,934,599	+		DZA65_RS09165	0.31	-0.2
1,934,600	-		DZA65_RS09165	0.31	+1.2
1,934,600	-		DZA65_RS09165	0.31	-0.4
1,934,608	+		DZA65_RS09165	0.31	+0.3
1,934,608	+		DZA65_RS09165	0.31	-0.4
1,934,608	+		DZA65_RS09165	0.31	-2.8
1,934,609	-		DZA65_RS09165	0.31	-1.3
1,934,609	-		DZA65_RS09165	0.31	+0.6
1,934,609	-		DZA65_RS09165	0.31	+0.3
1,934,761	+		DZA65_RS09165	0.40	+0.7
1,934,800	+		DZA65_RS09165	0.42	+0.6
1,934,800	+		DZA65_RS09165	0.42	-1.2
1,934,800	+		DZA65_RS09165	0.42	+1.2
1,934,800	+		DZA65_RS09165	0.42	-1.7
1,934,800	+		DZA65_RS09165	0.42	+0.4
1,934,800	+		DZA65_RS09165	0.42	+0.2
1,934,800	+		DZA65_RS09165	0.42	+0.8
1,934,800	+		DZA65_RS09165	0.42	+0.7
1,934,800	+		DZA65_RS09165	0.42	+0.4
1,934,801	-		DZA65_RS09165	0.42	-0.4
1,934,801	-		DZA65_RS09165	0.42	-0.1
1,934,801	-		DZA65_RS09165	0.42	-1.1
1,934,801	-		DZA65_RS09165	0.42	+0.2
1,934,801	-		DZA65_RS09165	0.42	-0.4
1,934,801	-		DZA65_RS09165	0.42	+0.9
1,934,801	-		DZA65_RS09165	0.42	+0.0
1,934,801	-		DZA65_RS09165	0.42	+0.9
1,934,801	-		DZA65_RS09165	0.42	-2.2
1,934,866	-		DZA65_RS09165	0.45	-0.1
1,934,911	+		DZA65_RS09165	0.48	-0.4