Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05205

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,068,477	+		DZA65_RS05200	0.12	-1.1
1,068,517	+		DZA65_RS05200	0.16	-0.4
1,068,518	-		DZA65_RS05200	0.16	+0.3
1,068,562	+		DZA65_RS05200	0.21	+0.1
1,068,617	-		DZA65_RS05200	0.27	+0.6
1,068,658	+		DZA65_RS05200	0.32	+2.3
1,068,659	-		DZA65_RS05200	0.32	-0.1
1,068,666	+		DZA65_RS05200	0.33	+0.1
1,068,742	-		DZA65_RS05200	0.41	+0.2
1,068,766	-		DZA65_RS05200	0.44	-0.4
1,068,769	+		DZA65_RS05200	0.44	-0.2
1,068,774	-		DZA65_RS05200	0.45	+0.5
1,068,774	-		DZA65_RS05200	0.45	+0.1
1,068,870	-		DZA65_RS05200	0.56	-1.2
1,068,870	-		DZA65_RS05200	0.56	-0.9
1,068,877	+		DZA65_RS05200	0.56	+0.2
1,068,877	+		DZA65_RS05200	0.56	+0.2
1,068,877	+		DZA65_RS05200	0.56	+0.1
1,068,877	+		DZA65_RS05200	0.56	+0.6
1,068,877	+		DZA65_RS05200	0.56	+0.6
1,068,877	+		DZA65_RS05200	0.56	-1.8
1,068,878	-		DZA65_RS05200	0.56	-1.1
1,068,878	-		DZA65_RS05200	0.56	+0.4
1,068,878	-		DZA65_RS05200	0.56	+0.1
1,068,878	-		DZA65_RS05200	0.56	-0.2
1,068,878	-		DZA65_RS05200	0.56	+0.6
1,068,878	-		DZA65_RS05200	0.56	-0.2
1,068,883	+		DZA65_RS05200	0.57	+0.4
1,068,883	+		DZA65_RS05200	0.57	-2.2
1,068,883	+		DZA65_RS05200	0.57	+0.9
1,068,884	-		DZA65_RS05200	0.57	-1.4
1,068,884	-		DZA65_RS05200	0.57	+0.0
1,068,884	-		DZA65_RS05200	0.57	+1.8
1,068,884	-		DZA65_RS05200	0.57	-0.1
1,068,884	-		DZA65_RS05200	0.57	+1.1
1,068,884	-		DZA65_RS05200	0.57	+0.2
1,068,884	-		DZA65_RS05200	0.57	-0.3
1,068,884	-		DZA65_RS05200	0.57	-1.4
1,068,893	+		DZA65_RS05200	0.58	+0.0
1,068,893	+		DZA65_RS05200	0.58	-2.0
1,068,894	-		DZA65_RS05200	0.58	+0.1
1,068,894	-		DZA65_RS05200	0.58	+1.2
1,068,936	+		DZA65_RS05200	0.63	-0.1
1,068,936	+		DZA65_RS05200	0.63	+1.5
1,068,939	+		DZA65_RS05200	0.63	+0.8
1,068,939	+		DZA65_RS05200	0.63	+0.0
1,069,014	-		DZA65_RS05200	0.72	+0.4
1,069,049	-		DZA65_RS05200	0.76	-1.6
1,069,099	+		DZA65_RS05200	0.81	+0.6
1,069,099	+		DZA65_RS05200	0.81	+0.2
1,069,099	+		DZA65_RS05200	0.81	+0.7
1,069,099	+		DZA65_RS05200	0.81	+0.2
1,069,099	+		DZA65_RS05200	0.81	-0.1
1,069,099	+		DZA65_RS05200	0.81	+0.2
1,069,100	-		DZA65_RS05200	0.81	-2.1
1,069,100	-		DZA65_RS05200	0.81	-1.5
1,069,101	+		DZA65_RS05200	0.81	-0.8
1,069,132	+		DZA65_RS05200	0.85	-1.9
1,069,132	+		DZA65_RS05200	0.85	-0.2
1,069,185	+				-1.0
1,069,198	-				-0.1
1,069,198	-				-0.1
1,069,242	+				+1.9
1,069,266	+				+0.6
1,069,266	+				+1.0
1,069,266	+				+0.5
1,069,266	+				+0.9
1,069,266	+				-0.6
1,069,267	-				+0.7
1,069,270	-				+1.9
1,069,270	-				+0.6
1,069,271	+				-0.1
1,069,301	-				-0.1
1,069,313	+				-0.6
1,069,326	+				-0.6
1,069,326	+				-0.2
1,069,327	-				+0.1
1,069,327	-				-0.3
1,069,331	-				+1.9
1,069,349	+				-0.3
1,069,349	+				+0.1
1,069,349	+				+0.1
1,069,350	-				+0.4
1,069,383	+				-0.3
1,069,384	-				+1.0
1,069,384	-				+0.7
1,069,391	+				+0.0
1,069,392	-				-0.3
1,069,392	-				+0.9
1,069,404	+				-1.6
1,069,436	-				+1.8
1,069,492	+				-0.6
1,069,492	+				+0.9
1,069,492	+				+0.0
1,069,493	-				-0.1
1,069,493	-				+0.6
1,069,493	-				+0.6
1,069,494	+				-1.1
1,069,494	+				-0.3
1,069,495	-				+0.4
1,069,495	-				-0.1
1,069,553	+		DZA65_RS05205	0.17	-0.1
1,069,553	+		DZA65_RS05205	0.17	+0.3
1,069,553	+		DZA65_RS05205	0.17	+0.0
1,069,554	-		DZA65_RS05205	0.17	+0.7
1,069,597	+		DZA65_RS05205	0.24	+2.4
1,069,630	+		DZA65_RS05205	0.30	-0.1
1,069,631	-		DZA65_RS05205	0.30	+0.5
1,069,696	+		DZA65_RS05205	0.41	-1.2
1,069,696	+		DZA65_RS05205	0.41	+0.9
1,069,696	+		DZA65_RS05205	0.41	+1.4
1,069,697	-		DZA65_RS05205	0.42	-2.1
1,069,697	-		DZA65_RS05205	0.42	+0.5
1,069,697	-		DZA65_RS05205	0.42	+1.4
1,069,700	-		DZA65_RS05205	0.42	-0.1
1,069,700	-		DZA65_RS05205	0.42	-1.2
1,069,795	+		DZA65_RS05205	0.59	+0.3
1,069,845	-		DZA65_RS05205	0.67	+0.5
1,069,845	-		DZA65_RS05205	0.67	-0.5
1,069,845	-		DZA65_RS05205	0.67	-2.1
1,069,845	-		DZA65_RS05205	0.67	-0.8
1,069,845	-		DZA65_RS05205	0.67	-0.1
1,069,864	-		DZA65_RS05205	0.71	-0.3
1,069,864	-		DZA65_RS05205	0.71	+0.1
1,069,893	-		DZA65_RS05205	0.76	-1.6
1,069,945	+		DZA65_RS05205	0.85	+0.9
1,069,945	+		DZA65_RS05205	0.85	+0.4
1,069,945	+		DZA65_RS05205	0.85	-0.1
1,069,945	+		DZA65_RS05205	0.85	-1.1
1,069,945	+		DZA65_RS05205	0.85	+0.3
1,069,945	+		DZA65_RS05205	0.85	-0.1
1,069,945	+		DZA65_RS05205	0.85	+0.2
1,069,945	+		DZA65_RS05205	0.85	+0.9
1,069,945	+		DZA65_RS05205	0.85	-0.5
1,069,945	+		DZA65_RS05205	0.85	+1.1
1,069,946	-		DZA65_RS05205	0.85	+0.6
1,069,946	-		DZA65_RS05205	0.85	+1.2
1,069,946	-		DZA65_RS05205	0.85	+2.9
1,069,946	-		DZA65_RS05205	0.85	+0.4
1,069,946	-		DZA65_RS05205	0.85	-0.6
1,069,946	-		DZA65_RS05205	0.85	+0.1
1,069,949	+		DZA65_RS05205	0.85	+0.4
1,069,949	+		DZA65_RS05205	0.85	+0.4
1,069,950	-		DZA65_RS05205	0.86	+0.6
1,069,950	-		DZA65_RS05205	0.86	+0.7
1,069,950	-		DZA65_RS05205	0.86	+0.8
1,069,950	-		DZA65_RS05205	0.86	+0.6
1,069,950	-		DZA65_RS05205	0.86	+0.9
1,069,963	+		DZA65_RS05205	0.88	-0.6
1,069,964	-		DZA65_RS05205	0.88	+0.2
1,070,028	-				+0.8
1,070,032	+				+0.3
1,070,032	+				+0.4
1,070,033	-				-0.4
1,070,033	-				-0.6
1,070,065	-				+0.6
1,070,096	+				-0.4
1,070,096	+				-0.2
1,070,096	+				-0.2
1,070,097	-				+0.7
1,070,097	-				+0.1
1,070,101	+				+0.4
1,070,101	+				-0.3
1,070,101	+				+0.1
1,070,101	+				-0.6
1,070,101	+				-0.7
1,070,101	+				+0.9
1,070,102	-				+1.2
1,070,102	-				-1.1
1,070,102	-				-0.4
1,070,102	-				-0.5
1,070,102	-				+0.9
1,070,102	-				-0.6
1,070,104	+				+0.7
1,070,133	+				-0.5
1,070,133	+				+0.7
1,070,133	+				-0.7
1,070,133	+				+0.6
1,070,133	+				+1.3
1,070,159	+				+0.1
1,070,159	+				-1.0
1,070,159	+				-0.4
1,070,160	-				+0.2
1,070,184	+				+1.3
1,070,185	-				-0.6
1,070,187	+				+0.2
1,070,187	+				+0.1
1,070,187	+				+0.4
1,070,188	-				-0.9
1,070,188	-				+0.9
1,070,189	+				+0.1
1,070,189	+				-0.6
1,070,190	-				+0.8
1,070,190	-				+0.5
1,070,219	+				-0.8
1,070,400	-		DZA65_RS05210	0.18	+0.3
1,070,413	+		DZA65_RS05210	0.18	+0.0
1,070,414	-		DZA65_RS05210	0.19	+0.2
1,070,432	+		DZA65_RS05210	0.20	+0.6
1,070,433	-		DZA65_RS05210	0.20	-0.1
1,070,433	-		DZA65_RS05210	0.20	+0.1
1,070,433	-		DZA65_RS05210	0.20	-0.3
1,070,433	-		DZA65_RS05210	0.20	-0.9
1,070,433	-		DZA65_RS05210	0.20	-0.4
1,070,489	+		DZA65_RS05210	0.24	+0.1
1,070,489	+		DZA65_RS05210	0.24	-2.4
1,070,489	+		DZA65_RS05210	0.24	-0.0
1,070,489	+		DZA65_RS05210	0.24	-0.1
1,070,489	+		DZA65_RS05210	0.24	+0.3
1,070,490	-		DZA65_RS05210	0.24	-1.1
1,070,490	-		DZA65_RS05210	0.24	+1.9
1,070,490	-		DZA65_RS05210	0.24	-0.2
1,070,490	-		DZA65_RS05210	0.24	+0.9
1,070,544	+		DZA65_RS05210	0.27	+0.7
1,070,545	-		DZA65_RS05210	0.27	+0.5
1,070,551	-		DZA65_RS05210	0.28	-1.6
1,070,554	+		DZA65_RS05210	0.28	-1.2
1,070,554	+		DZA65_RS05210	0.28	+0.1
1,070,554	+		DZA65_RS05210	0.28	+0.1
1,070,554	+		DZA65_RS05210	0.28	+1.9
1,070,555	-		DZA65_RS05210	0.28	+1.2
1,070,555	-		DZA65_RS05210	0.28	+0.0
1,070,555	-		DZA65_RS05210	0.28	+0.7
1,070,555	-		DZA65_RS05210	0.28	+0.2
1,070,555	-		DZA65_RS05210	0.28	+0.9
1,070,557	+		DZA65_RS05210	0.28	+0.5
1,070,557	+		DZA65_RS05210	0.28	-0.1
1,070,557	+		DZA65_RS05210	0.28	-2.1
1,070,557	+				+1.4
1,070,557	+		DZA65_RS05210	0.28	+0.9
1,070,558	-		DZA65_RS05210	0.28	-0.9
1,070,614	-		DZA65_RS05210	0.32	+0.1
1,070,619	+		DZA65_RS05210	0.32	-0.1
1,070,619	+		DZA65_RS05210	0.32	+0.4
1,070,619	+		DZA65_RS05210	0.32	+1.7
1,070,620	-		DZA65_RS05210	0.32	-0.5
1,070,620	-		DZA65_RS05210	0.32	+0.2
1,070,660	-		DZA65_RS05210	0.35	+0.1
1,070,660	-		DZA65_RS05210	0.35	-2.1
1,070,698	+		DZA65_RS05210	0.37	-0.3
1,070,698	+		DZA65_RS05210	0.37	-1.9
1,070,699	-		DZA65_RS05210	0.37	+0.5
1,070,772	-		DZA65_RS05210	0.42	-0.1
1,070,772	-		DZA65_RS05210	0.42	+0.4
1,070,772	-		DZA65_RS05210	0.42	-0.4
1,070,772	-		DZA65_RS05210	0.42	-0.7
1,070,772	-		DZA65_RS05210	0.42	+0.7
1,070,774	+		DZA65_RS05210	0.42	+1.6
1,070,774	+		DZA65_RS05210	0.42	+0.4
1,070,775	-		DZA65_RS05210	0.42	-1.5
1,070,783	+		DZA65_RS05210	0.43	-0.5
1,070,784	-		DZA65_RS05210	0.43	+0.2
1,070,836	-		DZA65_RS05210	0.47	+0.4
1,070,874	+		DZA65_RS05210	0.49	+0.5
1,070,905	-		DZA65_RS05210	0.51	+0.9
1,070,905	-				+3.3
1,070,905	-		DZA65_RS05210	0.51	-0.1
1,070,905	-		DZA65_RS05210	0.51	+0.2
1,070,907	+		DZA65_RS05210	0.51	+0.6
1,070,907	+		DZA65_RS05210	0.51	-0.8
1,070,907	+		DZA65_RS05210	0.51	+0.3
1,070,907	+		DZA65_RS05210	0.51	+0.2
1,070,908	-		DZA65_RS05210	0.51	-1.3
1,070,908	-		DZA65_RS05210	0.51	-1.9
1,070,910	+		DZA65_RS05210	0.51	+0.0
1,070,910	+		DZA65_RS05210	0.51	+0.4
1,070,910	+		DZA65_RS05210	0.51	+0.6
1,070,910	+		DZA65_RS05210	0.51	-0.7
1,070,910	+		DZA65_RS05210	0.51	-2.9
1,070,910	+		DZA65_RS05210	0.51	+0.8
1,070,911	-		DZA65_RS05210	0.51	-0.5
1,070,911	-		DZA65_RS05210	0.51	+0.6
1,070,911	-		DZA65_RS05210	0.51	+0.5
1,070,911	-		DZA65_RS05210	0.51	+0.4
1,070,911	-		DZA65_RS05210	0.51	-0.4
1,070,911	-		DZA65_RS05210	0.51	-0.8
1,070,911	-		DZA65_RS05210	0.51	-0.6
1,070,911	-		DZA65_RS05210	0.51	+1.4
1,070,911	-		DZA65_RS05210	0.51	-0.3
1,070,911	-		DZA65_RS05210	0.51	-0.2
1,070,912	+		DZA65_RS05210	0.52	+0.9
1,070,912	+		DZA65_RS05210	0.52	+1.5
1,070,912	+		DZA65_RS05210	0.52	-0.3
1,070,913	-		DZA65_RS05210	0.52	+1.4
1,070,913	-		DZA65_RS05210	0.52	-0.3
1,070,951	+		DZA65_RS05210	0.54	+0.2
1,070,951	+		DZA65_RS05210	0.54	+0.5
1,070,952	-		DZA65_RS05210	0.54	-0.2
1,070,952	-		DZA65_RS05210	0.54	+0.2
1,070,952	-		DZA65_RS05210	0.54	-0.8
1,070,964	-		DZA65_RS05210	0.55	+0.2
1,070,964	-		DZA65_RS05210	0.55	+1.7
1,070,964	-		DZA65_RS05210	0.55	+0.9
1,070,996	-		DZA65_RS05210	0.57	-0.1
1,071,001	-		DZA65_RS05210	0.57	+0.1