Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS04960

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,025,737	-		DZA65_RS04950	0.62	+0.2
1,025,737	-		DZA65_RS04950	0.62	-0.5
1,025,809	+		DZA65_RS04950	0.68	-2.5
1,025,809	+		DZA65_RS04950	0.68	+1.9
1,025,810	-		DZA65_RS04950	0.68	-0.2
1,025,810	-		DZA65_RS04950	0.68	-0.5
1,025,810	-		DZA65_RS04950	0.68	-0.9
1,025,810	-		DZA65_RS04950	0.68	+0.5
1,025,811	+				+1.2
1,025,812	-		DZA65_RS04950	0.68	-0.5
1,025,831	+		DZA65_RS04950	0.69	-1.6
1,025,847	+		DZA65_RS04950	0.71	-2.2
1,025,847	+		DZA65_RS04950	0.71	+0.1
1,025,847	+		DZA65_RS04950	0.71	-0.3
1,025,848	-		DZA65_RS04950	0.71	+0.4
1,025,848	-		DZA65_RS04950	0.71	-0.5
1,025,857	+		DZA65_RS04950	0.71	+0.3
1,025,857	+		DZA65_RS04950	0.71	-0.5
1,025,944	-		DZA65_RS04950	0.79	-0.6
1,026,048	+		DZA65_RS04950	0.87	-0.1
1,026,064	+		DZA65_RS04950	0.88	-0.6
1,026,076	+		DZA65_RS04950	0.89	+0.8
1,026,077	-		DZA65_RS04950	0.89	+0.2
1,026,077	-		DZA65_RS04950	0.89	-0.3
1,026,077	-		DZA65_RS04950	0.89	-1.2
1,026,178	+				+0.3
1,026,178	+				-0.2
1,026,178	+				+1.5
1,026,179	-				+1.2
1,026,179	-				+0.8
1,026,179	-				-1.1
1,026,179	-				+0.5
1,026,186	+				-1.6
1,026,187	-				+0.6
1,026,205	+				-0.1
1,026,205	+				-0.4
1,026,205	+				-0.9
1,026,205	+				-0.5
1,026,205	+				+0.9
1,026,205	+				-0.1
1,026,206	-				+0.2
1,026,206	-				+0.0
1,026,206	-				+0.4
1,026,211	+				+0.2
1,026,212	-				-2.5
1,026,212	-				+0.1
1,026,218	-				+0.7
1,026,223	+				-0.3
1,026,223	+				+0.4
1,026,224	-				-0.3
1,026,227	+				+0.1
1,026,227	+				+1.9
1,026,227	+				-0.8
1,026,228	-				+0.8
1,026,228	-				-0.1
1,026,228	-				-0.9
1,026,228	-				+0.2
1,026,235	+				+0.5
1,026,235	+				+1.1
1,026,281	+		DZA65_RS04955	0.11	+1.8
1,026,281	+		DZA65_RS04955	0.11	-0.2
1,026,281	+		DZA65_RS04955	0.11	+0.0
1,026,281	+		DZA65_RS04955	0.11	-0.2
1,026,281	+		DZA65_RS04955	0.11	-0.3
1,026,281	+		DZA65_RS04955	0.11	+0.5
1,026,281	+		DZA65_RS04955	0.11	+0.9
1,026,281	+		DZA65_RS04955	0.11	-0.4
1,026,281	+		DZA65_RS04955	0.11	-0.4
1,026,281	+		DZA65_RS04955	0.11	-0.4
1,026,281	+		DZA65_RS04955	0.11	+0.7
1,026,282	-		DZA65_RS04955	0.11	-1.0
1,026,282	-		DZA65_RS04955	0.11	+0.3
1,026,282	-		DZA65_RS04955	0.11	-0.4
1,026,479	-		DZA65_RS04955	0.50	-1.2
1,026,492	+		DZA65_RS04955	0.52	+0.3
1,026,492	+		DZA65_RS04955	0.52	-0.1
1,026,496	-		DZA65_RS04955	0.53	-0.6
1,026,496	-		DZA65_RS04955	0.53	+0.9
1,026,496	-		DZA65_RS04955	0.53	-0.4
1,026,531	+		DZA65_RS04955	0.60	-0.5
1,026,599	+		DZA65_RS04955	0.73	+0.1
1,026,600	-		DZA65_RS04955	0.73	-0.6
1,026,621	+		DZA65_RS04955	0.77	-1.6
1,026,622	-		DZA65_RS04955	0.78	-0.2
1,026,624	+		DZA65_RS04955	0.78	-0.9
1,026,624	+		DZA65_RS04955	0.78	-0.4
1,026,624	+		DZA65_RS04955	0.78	-1.2
1,026,653	+		DZA65_RS04955	0.84	+0.5
1,026,653	+		DZA65_RS04955	0.84	+0.1
1,026,671	+		DZA65_RS04955	0.87	-1.1
1,026,671	+		DZA65_RS04955	0.87	-1.2
1,026,671	+		DZA65_RS04955	0.87	-0.2
1,026,671	+		DZA65_RS04955	0.87	-0.6
1,026,672	-		DZA65_RS04955	0.87	-2.2
1,026,675	+		DZA65_RS04955	0.88	-0.9
1,026,675	+		DZA65_RS04955	0.88	-1.3
1,026,675	+		DZA65_RS04955	0.88	-1.4
1,026,675	+		DZA65_RS04955	0.88	+0.4
1,026,676	-		DZA65_RS04955	0.88	-0.1
1,026,676	-		DZA65_RS04955	0.88	-0.4
1,026,690	+				-0.4
1,026,691	-				+0.2
1,026,702	+				-0.3
1,026,703	-				-1.2
1,026,801	-				-2.4
1,027,817	-				+0.1
1,027,817	-				-0.9
1,027,821	-				-0.7
1,027,835	+				-1.9
1,027,836	-				+0.2
1,027,836	-				-0.6
1,027,836	-				+0.1
1,027,836	-				+0.2
1,027,859	-				+0.4
1,027,880	+				-0.5
1,027,880	+				+0.3
1,027,880	+				+0.1
1,027,881	-				-0.8
1,027,881	-				+0.2
1,027,881	-				+0.2
1,027,881	-				-2.2
1,027,881	-				-0.7
1,028,020	+				+0.6
1,028,020	+				+0.3
1,028,020	+				+0.9
1,028,021	-				+0.5
1,028,021	-				-1.5
1,028,021	-				-0.1
1,028,038	-				-0.8
1,028,088	+				+0.3
1,028,088	+				-1.0
1,028,088	+				-0.2
1,028,088	+				-0.3
1,028,088	+				+0.2
1,028,088	+				+1.7
1,028,089	-				-0.1
1,028,089	-				-0.1
1,028,089	-				-0.2
1,028,089	-				-0.6
1,028,089	-				-0.2
1,028,089	-				-0.5
1,028,102	+				+0.1
1,028,102	+				+2.1
1,028,103	-				-0.3
1,028,103	-				+0.1
1,028,103	-				+0.7
1,028,110	+				-0.4
1,028,111	-				+0.2
1,028,111	-				+0.6
1,028,121	+				-0.6
1,028,121	+				-0.1
1,028,121	+				-1.1
1,028,121	+				+0.3
1,028,130	-				-1.2
1,028,130	-				+0.9
1,028,130	-				-0.1
1,028,136	+				-0.4
1,028,136	+				+1.1
1,028,136	+				-1.4
1,028,143	+				-1.0
1,028,156	+				-0.2
1,028,156	+				-1.6
1,028,157	-				-0.2
1,028,157	-				+0.5
1,028,157	-				-1.4
1,028,186	+				+0.7
1,028,187	-				-1.4
1,028,187	-				+1.1
1,028,267	+		DZA65_RS04965	0.12	-1.4
1,028,267	+		DZA65_RS04965	0.12	-0.2
1,028,268	-		DZA65_RS04965	0.12	-1.5
1,028,268	-		DZA65_RS04965	0.12	-0.4
1,028,333	+		DZA65_RS04965	0.19	+0.4
1,028,333	+		DZA65_RS04965	0.19	-0.1
1,028,333	+		DZA65_RS04965	0.19	-0.4
1,028,333	+		DZA65_RS04965	0.19	-0.2
1,028,334	-		DZA65_RS04965	0.19	-0.6
1,028,334	-		DZA65_RS04965	0.19	-1.5
1,028,344	+		DZA65_RS04965	0.21	-0.5
1,028,344	+		DZA65_RS04965	0.21	+0.2
1,028,388	+		DZA65_RS04965	0.25	-0.9
1,028,388	+		DZA65_RS04965	0.25	-0.1
1,028,388	+		DZA65_RS04965	0.25	+0.4
1,028,389	-		DZA65_RS04965	0.26	-1.1
1,028,389	-		DZA65_RS04965	0.26	+1.1
1,028,389	-		DZA65_RS04965	0.26	-0.4
1,028,481	-		DZA65_RS04965	0.36	-0.3
1,028,528	-		DZA65_RS04965	0.41	-1.5
1,028,616	-		DZA65_RS04965	0.50	+0.7
1,028,624	+		DZA65_RS04965	0.51	-1.4
1,028,625	-		DZA65_RS04965	0.51	+0.5
1,028,626	+		DZA65_RS04965	0.52	-0.5
1,028,626	+		DZA65_RS04965	0.52	-0.2
1,028,626	+		DZA65_RS04965	0.52	+0.5
1,028,626	+		DZA65_RS04965	0.52	-1.1
1,028,627	-		DZA65_RS04965	0.52	-0.2
1,028,627	-		DZA65_RS04965	0.52	-0.5
1,028,627	-		DZA65_RS04965	0.52	-0.9
1,028,627	-		DZA65_RS04965	0.52	-1.8
1,028,690	+		DZA65_RS04965	0.59	+0.9
1,028,690	+		DZA65_RS04965	0.59	+0.3
1,028,691	-		DZA65_RS04965	0.59	+0.6
1,028,691	-		DZA65_RS04965	0.59	-0.2
1,028,691	-		DZA65_RS04965	0.59	-0.5