Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS04375 and DZA65_RS04380 are separated by 222 nucleotides DZA65_RS04380 and DZA65_RS04385 are separated by 148 nucleotides
DZA65_RS04375: DZA65_RS04375 - sulfate transporter CysZ, at 912,413 to 913,183
_RS04375
DZA65_RS04380: DZA65_RS04380 - cell division protein ZipA, at 913,406 to 914,305
_RS04380
DZA65_RS04385: DZA65_RS04385 - L-methionine/branched-chain amino acid transporter, at 914,454 to 915,707
_RS04385
Position (kb) 913
914
915 Strain fitness (log2 ratio) -2
-1
0
1
2 at 912.414 kb on + strand at 912.414 kb on + strand at 912.414 kb on + strand at 912.414 kb on + strand at 912.415 kb on - strand at 912.415 kb on - strand at 912.415 kb on - strand at 912.415 kb on - strand at 912.415 kb on - strand at 912.447 kb on + strand at 912.493 kb on + strand, within DZA65_RS04375 at 912.523 kb on + strand, within DZA65_RS04375 at 912.523 kb on + strand, within DZA65_RS04375 at 912.523 kb on + strand, within DZA65_RS04375 at 912.523 kb on + strand, within DZA65_RS04375 at 912.524 kb on - strand, within DZA65_RS04375 at 912.524 kb on - strand, within DZA65_RS04375 at 912.524 kb on - strand, within DZA65_RS04375 at 912.527 kb on + strand, within DZA65_RS04375 at 912.527 kb on + strand, within DZA65_RS04375 at 912.527 kb on + strand, within DZA65_RS04375 at 912.527 kb on + strand, within DZA65_RS04375 at 912.527 kb on + strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.528 kb on - strand, within DZA65_RS04375 at 912.625 kb on - strand, within DZA65_RS04375 at 912.633 kb on + strand, within DZA65_RS04375 at 912.731 kb on + strand, within DZA65_RS04375 at 912.731 kb on + strand, within DZA65_RS04375 at 912.731 kb on + strand, within DZA65_RS04375 at 912.731 kb on + strand, within DZA65_RS04375 at 912.732 kb on - strand, within DZA65_RS04375 at 912.732 kb on - strand, within DZA65_RS04375 at 912.744 kb on + strand, within DZA65_RS04375 at 912.744 kb on + strand, within DZA65_RS04375 at 912.744 kb on + strand, within DZA65_RS04375 at 912.745 kb on - strand, within DZA65_RS04375 at 912.745 kb on - strand, within DZA65_RS04375 at 912.745 kb on - strand, within DZA65_RS04375 at 912.745 kb on - strand, within DZA65_RS04375 at 912.745 kb on - strand, within DZA65_RS04375 at 912.747 kb on + strand, within DZA65_RS04375 at 912.747 kb on + strand, within DZA65_RS04375 at 912.748 kb on - strand, within DZA65_RS04375 at 912.748 kb on - strand, within DZA65_RS04375 at 912.752 kb on + strand, within DZA65_RS04375 at 912.752 kb on + strand, within DZA65_RS04375 at 912.752 kb on + strand, within DZA65_RS04375 at 912.898 kb on + strand, within DZA65_RS04375 at 912.898 kb on + strand at 912.899 kb on - strand, within DZA65_RS04375 at 912.912 kb on + strand, within DZA65_RS04375 at 912.912 kb on + strand, within DZA65_RS04375 at 912.912 kb on + strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.913 kb on - strand, within DZA65_RS04375 at 912.920 kb on + strand, within DZA65_RS04375 at 912.920 kb on + strand, within DZA65_RS04375 at 912.920 kb on + strand, within DZA65_RS04375 at 912.920 kb on + strand, within DZA65_RS04375 at 912.961 kb on - strand, within DZA65_RS04375 at 912.961 kb on - strand, within DZA65_RS04375 at 912.961 kb on - strand, within DZA65_RS04375 at 912.961 kb on - strand, within DZA65_RS04375 at 912.961 kb on - strand, within DZA65_RS04375 at 913.063 kb on + strand, within DZA65_RS04375 at 913.067 kb on - strand, within DZA65_RS04375 at 913.137 kb on + strand at 913.137 kb on + strand at 913.137 kb on + strand at 913.137 kb on + strand at 913.138 kb on - strand at 913.177 kb on - strand at 913.177 kb on - strand at 913.183 kb on + strand at 913.183 kb on + strand at 913.183 kb on + strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.184 kb on - strand at 913.186 kb on + strand at 913.186 kb on + strand at 913.186 kb on + strand at 913.187 kb on - strand at 913.187 kb on - strand at 913.200 kb on + strand at 913.200 kb on + strand at 913.201 kb on - strand at 913.201 kb on - strand at 913.205 kb on + strand at 913.206 kb on - strand at 913.206 kb on - strand at 913.224 kb on + strand at 913.247 kb on + strand at 913.248 kb on - strand at 913.248 kb on - strand at 913.248 kb on - strand at 913.248 kb on - strand at 913.248 kb on - strand at 913.298 kb on + strand at 913.298 kb on + strand at 913.299 kb on - strand at 913.302 kb on - strand at 913.306 kb on + strand at 913.306 kb on + strand at 913.306 kb on + strand at 913.306 kb on + strand at 913.306 kb on + strand at 913.306 kb on + strand at 913.311 kb on + strand at 913.311 kb on + strand at 913.311 kb on + strand at 913.311 kb on + strand at 913.311 kb on + strand at 913.312 kb on - strand at 913.312 kb on - strand at 913.334 kb on + strand at 913.346 kb on + strand at 913.352 kb on + strand at 913.352 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.358 kb on + strand at 913.384 kb on + strand at 913.384 kb on + strand at 913.384 kb on + strand at 913.392 kb on + strand at 914.274 kb on + strand at 914.274 kb on + strand at 914.275 kb on - strand at 914.275 kb on - strand at 914.275 kb on - strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.284 kb on + strand at 914.284 kb on + strand at 914.287 kb on + strand at 914.287 kb on + strand at 914.287 kb on + strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.290 kb on + strand at 914.290 kb on + strand at 914.290 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.330 kb on + strand at 914.330 kb on + strand at 914.331 kb on - strand at 914.331 kb on - strand at 914.331 kb on - strand at 914.365 kb on - strand at 914.365 kb on - strand at 914.419 kb on + strand at 914.465 kb on + strand at 914.466 kb on - strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.473 kb on + strand at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.966 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.131 kb on - strand, within DZA65_RS04385 at 915.131 kb on - strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 912,414 + -1.5 912,414 + -0.1 912,414 + -0.9 912,414 + +0.8 912,415 - +0.3 912,415 - +1.0 912,415 - +0.2 912,415 - -0.2 912,415 - -0.1 912,447 + -0.9 912,493 + DZA65_RS04375 0.10 -1.2 912,523 + DZA65_RS04375 0.14 +0.0 912,523 + DZA65_RS04375 0.14 +1.2 912,523 + DZA65_RS04375 0.14 +0.6 912,523 + DZA65_RS04375 0.14 +0.1 912,524 - DZA65_RS04375 0.14 -0.7 912,524 - DZA65_RS04375 0.14 +0.1 912,524 - DZA65_RS04375 0.14 +0.1 912,527 + DZA65_RS04375 0.15 -0.0 912,527 + DZA65_RS04375 0.15 +1.0 912,527 + DZA65_RS04375 0.15 -0.0 912,527 + DZA65_RS04375 0.15 +0.8 912,527 + DZA65_RS04375 0.15 -0.3 912,528 - DZA65_RS04375 0.15 +1.0 912,528 - DZA65_RS04375 0.15 -0.5 912,528 - DZA65_RS04375 0.15 -1.0 912,528 - DZA65_RS04375 0.15 -0.5 912,528 - DZA65_RS04375 0.15 -0.4 912,528 - DZA65_RS04375 0.15 -1.0 912,528 - DZA65_RS04375 0.15 -1.0 912,528 - DZA65_RS04375 0.15 +0.4 912,528 - DZA65_RS04375 0.15 +1.5 912,528 - DZA65_RS04375 0.15 +0.5 912,528 - DZA65_RS04375 0.15 -1.6 912,528 - DZA65_RS04375 0.15 +1.4 912,528 - DZA65_RS04375 0.15 -1.5 912,528 - DZA65_RS04375 0.15 -0.5 912,528 - DZA65_RS04375 0.15 +1.3 912,528 - DZA65_RS04375 0.15 -0.4 912,528 - DZA65_RS04375 0.15 -0.5 912,625 - DZA65_RS04375 0.27 +0.6 912,633 + DZA65_RS04375 0.29 -0.5 912,731 + DZA65_RS04375 0.41 -0.0 912,731 + DZA65_RS04375 0.41 +1.6 912,731 + DZA65_RS04375 0.41 +0.2 912,731 + DZA65_RS04375 0.41 -0.0 912,732 - DZA65_RS04375 0.41 +0.3 912,732 - DZA65_RS04375 0.41 +0.3 912,744 + DZA65_RS04375 0.43 -0.2 912,744 + DZA65_RS04375 0.43 -0.9 912,744 + DZA65_RS04375 0.43 +1.4 912,745 - DZA65_RS04375 0.43 +0.5 912,745 - DZA65_RS04375 0.43 -0.8 912,745 - DZA65_RS04375 0.43 -0.8 912,745 - DZA65_RS04375 0.43 +1.3 912,745 - DZA65_RS04375 0.43 +0.4 912,747 + DZA65_RS04375 0.43 +1.4 912,747 + DZA65_RS04375 0.43 -0.9 912,748 - DZA65_RS04375 0.43 +0.3 912,748 - DZA65_RS04375 0.43 +0.2 912,752 + DZA65_RS04375 0.44 +0.5 912,752 + DZA65_RS04375 0.44 -0.6 912,752 + DZA65_RS04375 0.44 -0.3 912,898 + DZA65_RS04375 0.63 -0.3 912,898 + +1.0 912,899 - DZA65_RS04375 0.63 +1.7 912,912 + DZA65_RS04375 0.65 -0.1 912,912 + DZA65_RS04375 0.65 +1.0 912,912 + DZA65_RS04375 0.65 -0.6 912,913 - DZA65_RS04375 0.65 +0.7 912,913 - DZA65_RS04375 0.65 +1.0 912,913 - DZA65_RS04375 0.65 -0.4 912,913 - DZA65_RS04375 0.65 -1.4 912,913 - DZA65_RS04375 0.65 +0.1 912,913 - DZA65_RS04375 0.65 -0.0 912,920 + DZA65_RS04375 0.66 -1.0 912,920 + DZA65_RS04375 0.66 +0.2 912,920 + DZA65_RS04375 0.66 -0.4 912,920 + DZA65_RS04375 0.66 +0.4 912,961 - DZA65_RS04375 0.71 +0.7 912,961 - DZA65_RS04375 0.71 -0.5 912,961 - DZA65_RS04375 0.71 -0.0 912,961 - DZA65_RS04375 0.71 -0.3 912,961 - DZA65_RS04375 0.71 -0.5 913,063 + DZA65_RS04375 0.84 -0.4 913,067 - DZA65_RS04375 0.85 +0.2 913,137 + -0.2 913,137 + -1.3 913,137 + +0.1 913,137 + +1.8 913,138 - +0.5 913,177 - +1.2 913,177 - -0.0 913,183 + -0.2 913,183 + -0.5 913,183 + -0.2 913,184 - +0.8 913,184 - +0.6 913,184 - -0.0 913,184 - -1.0 913,184 - -0.4 913,184 - -0.1 913,184 - -0.0 913,184 - -0.2 913,184 - +1.0 913,184 - -1.4 913,184 - -1.1 913,184 - +0.6 913,184 - +0.4 913,186 + -0.2 913,186 + +0.4 913,186 + -0.7 913,187 - +0.6 913,187 - +0.2 913,200 + +1.2 913,200 + -1.3 913,201 - -0.4 913,201 - -1.8 913,205 + +1.5 913,206 - -1.0 913,206 - +0.5 913,224 + +1.1 913,247 + -0.2 913,248 - +0.4 913,248 - -0.5 913,248 - -0.5 913,248 - -0.4 913,248 - +1.3 913,298 + +0.4 913,298 + +1.5 913,299 - +0.0 913,302 - +0.2 913,306 + +0.2 913,306 + +1.0 913,306 + +0.1 913,306 + -0.4 913,306 + -0.8 913,306 + -0.4 913,311 + +1.0 913,311 + -0.9 913,311 + +0.5 913,311 + -0.2 913,311 + -0.0 913,312 - -1.4 913,312 - -2.5 913,334 + -0.1 913,346 + +0.3 913,352 + -0.1 913,352 + +0.5 913,358 + +1.6 913,358 + -1.7 913,358 + -1.8 913,358 + -1.0 913,358 + -0.7 913,358 + -1.7 913,358 + +0.4 913,358 + -1.1 913,358 + -0.1 913,384 + -0.6 913,384 + -0.0 913,384 + +2.2 913,392 + +1.4 914,274 + -0.9 914,274 + +1.2 914,275 - -0.6 914,275 - -0.2 914,275 - +0.6 914,278 + -1.5 914,278 + +0.4 914,278 + +0.4 914,278 + +0.7 914,279 - -0.4 914,279 - -0.4 914,279 - -1.4 914,279 - +1.5 914,279 - -1.8 914,284 + +0.2 914,284 + -0.0 914,287 + -1.6 914,287 + +0.2 914,287 + +0.2 914,288 - +0.3 914,288 - +1.0 914,288 - +0.1 914,288 - +0.8 914,290 + -0.2 914,290 + +1.0 914,290 + -0.4 914,324 + -0.5 914,324 + -1.6 914,324 + +0.2 914,324 + -0.2 914,324 + -0.1 914,324 + -0.4 914,324 + -0.4 914,324 + +0.1 914,324 + +0.6 914,324 + +0.2 914,324 + +0.2 914,324 + +0.4 914,324 + +0.1 914,325 - -0.4 914,325 - -0.5 914,325 - +0.1 914,325 - -0.2 914,325 - +0.1 914,325 - -0.0 914,325 - -0.6 914,325 - -0.6 914,325 - -0.6 914,325 - -0.5 914,330 + +0.8 914,330 + -0.6 914,331 - -0.2 914,331 - -0.5 914,331 - +1.1 914,365 - -0.5 914,365 - +0.1 914,419 + +0.3 914,465 + -0.2 914,466 - +0.2 914,468 + -0.2 914,468 + +0.1 914,468 + +0.3 914,468 + +1.4 914,468 + +0.2 914,468 + -0.4 914,468 + -1.0 914,469 - -0.6 914,469 - -0.7 914,469 - +0.2 914,469 - +0.2 914,469 - +0.6 914,473 + -0.0 914,682 + DZA65_RS04385 0.18 -0.0 914,682 + DZA65_RS04385 0.18 -0.6 914,682 + DZA65_RS04385 0.18 +0.2 914,682 + DZA65_RS04385 0.18 -1.0 914,682 + DZA65_RS04385 0.18 -1.4 914,903 - DZA65_RS04385 0.36 +0.5 914,903 - DZA65_RS04385 0.36 -0.4 914,903 - DZA65_RS04385 0.36 +0.3 914,966 + DZA65_RS04385 0.41 +1.2 915,130 + DZA65_RS04385 0.54 -0.4 915,130 + DZA65_RS04385 0.54 -0.2 915,130 + DZA65_RS04385 0.54 +0.7 915,130 + DZA65_RS04385 0.54 -0.1 915,130 + DZA65_RS04385 0.54 -0.8 915,131 - DZA65_RS04385 0.54 +0.2 915,131 - DZA65_RS04385 0.54 -0.0 915,167 + DZA65_RS04385 0.57 -0.3 915,167 + DZA65_RS04385 0.57 +1.3 915,167 + DZA65_RS04385 0.57 -0.3 915,167 + DZA65_RS04385 0.57 -0.9 915,167 + DZA65_RS04385 0.57 -0.0 915,167 + DZA65_RS04385 0.57 -0.5 915,167 + DZA65_RS04385 0.57 +0.6 915,168 - DZA65_RS04385 0.57 +0.4 915,168 - DZA65_RS04385 0.57 -0.2 915,168 - DZA65_RS04385 0.57 -0.7 915,168 - DZA65_RS04385 0.57 +0.8 915,168 - DZA65_RS04385 0.57 +0.2 915,168 - DZA65_RS04385 0.57 +0.8 915,168 - DZA65_RS04385 0.57 -0.5 915,168 - DZA65_RS04385 0.57 +0.5 915,168 - DZA65_RS04385 0.57 +0.3 915,168 - DZA65_RS04385 0.57 +0.2
Or see this region's nucleotide sequence