Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21060

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,552,554	+				-1.8
4,552,554	+				-0.6
4,552,554	+				-0.2
4,552,555	-				-2.5
4,552,555	-				-0.5
4,552,592	-				-1.3
4,552,613	-				-0.2
4,552,613	-				+0.6
4,552,613	-				+0.5
4,552,617	-				-1.1
4,552,617	-				-0.4
4,552,731	+				-0.5
4,552,731	+				-0.2
4,552,732	-				-0.1
4,552,732	-				+0.2
4,552,732	-				+0.2
4,552,732	-				-0.7
4,552,732	-				+0.9
4,552,732	-				-0.6
4,552,732	-				+0.2
4,552,732	-				-0.9
4,552,732	-				+1.0
4,552,778	+		DZA65_RS21050	0.64	-0.6
4,552,778	+		DZA65_RS21050	0.64	-1.4
4,552,778	+		DZA65_RS21050	0.64	-1.0
4,552,815	+				-1.1
4,552,816	-				-0.7
4,552,816	-				+0.5
4,552,824	+				-0.1
4,552,829	+				-0.8
4,552,829	+				-0.5
4,552,829	+				-2.4
4,552,829	+				-0.8
4,552,829	+				-0.1
4,552,829	+				-1.5
4,552,830	-				+0.5
4,552,830	-				+0.5
4,552,830	-				-0.2
4,552,830	-				-0.0
4,552,830	-				-0.1
4,552,830	-				-0.5
4,552,830	-				-0.3
4,552,866	+				+0.9
4,552,866	+				+0.5
4,552,866	+				+0.4
4,552,866	+				+0.8
4,552,866	+				-0.5
4,552,866	+				-1.1
4,552,866	+				+1.3
4,552,867	-				-0.9
4,552,867	-				-0.3
4,552,867	-				-0.3
4,552,867	-				-0.4
4,552,867	-				+0.6
4,552,867	-				-1.4
4,552,867	-				-0.4
4,552,867	-				+0.1
4,552,867	-				-0.3
4,552,867	-				-0.2
4,552,867	-				+0.5
4,552,867	-				+0.4
4,552,868	+				-0.1
4,552,894	+				+0.5
4,552,895	-				-0.7
4,552,920	+				-1.0
4,552,931	+				+0.5
4,552,985	+				+0.3
4,552,985	+				-0.1
4,552,985	+				+0.6
4,552,985	+				-1.1
4,552,985	+				+0.3
4,552,986	-				-0.2
4,552,986	-				-0.1
4,552,986	-				+0.8
4,552,986	-				-0.1
4,552,986	-				-1.1
4,552,988	+				+1.0
4,552,988	+				-0.4
4,552,988	+				+0.7
4,552,989	-				+1.3
4,552,989	-				+1.3
4,552,989	-				-0.4
4,552,989	-				-0.5
4,552,989	-				-0.5
4,552,989	-				+1.0
4,552,989	-				-1.3
4,552,989	-				-0.1
4,552,989	-				-0.6
4,552,989	-				+1.0
4,553,011	+				+0.6
4,553,011	+				+0.3
4,553,011	+				-0.1
4,553,011	+				+0.3
4,553,011	+				+0.0
4,553,011	+				-1.1
4,553,011	+				-1.3
4,553,011	+				+0.9
4,553,011	+				-1.5
4,553,011	+				-0.0
4,553,011	+				-1.0
4,553,011	+				+0.0
4,553,011	+				-0.6
4,553,011	+				-0.5
4,553,011	+				-0.9
4,553,011	+				-1.3
4,553,011	+				+0.2
4,553,011	+				+0.2
4,553,011	+				-0.5
4,553,011	+				+0.3
4,553,011	+				-0.9
4,553,011	+				-0.1
4,553,011	+				-1.0
4,553,011	+				+0.6
4,553,011	+				+0.3
4,553,011	+				-0.0
4,553,011	+				-0.8
4,553,011	+				-0.7
4,553,011	+				-0.1
4,553,011	+				+1.8
4,553,012	-				+0.0
4,553,012	-				-0.7
4,553,012	-				-1.3
4,553,012	-				-1.1
4,553,012	-				+0.4
4,553,012	-				-1.4
4,553,012	-				+0.2
4,553,012	-				-0.5
4,553,012	-				-0.5
4,553,012	-				-0.6
4,553,012	-				-0.7
4,553,012	-				-1.2
4,553,012	-				+0.0
4,553,012	-				-0.2
4,553,012	-				+0.7
4,553,012	-				-0.4
4,553,012	-				+0.0
4,553,012	-				-0.5
4,553,012	-				-1.2
4,553,012	-				+0.5
4,553,012	-				+0.0
4,553,036	+		DZA65_RS21055	0.12	-1.0
4,553,037	-		DZA65_RS21055	0.12	-0.3
4,553,037	-		DZA65_RS21055	0.12	-1.3
4,553,040	+		DZA65_RS21055	0.13	+2.3
4,553,040	+		DZA65_RS21055	0.13	+0.1
4,553,040	+		DZA65_RS21055	0.13	+0.2
4,553,040	+		DZA65_RS21055	0.13	-0.9
4,553,040	+		DZA65_RS21055	0.13	-0.7
4,553,040	+		DZA65_RS21055	0.13	-0.3
4,553,041	-		DZA65_RS21055	0.13	-0.2
4,553,041	-		DZA65_RS21055	0.13	-1.3
4,553,107	+		DZA65_RS21055	0.27	+0.2
4,553,304	+		DZA65_RS21055	0.69	-1.4
4,553,304	+		DZA65_RS21055	0.69	-0.7
4,553,304	+		DZA65_RS21055	0.69	+0.2
4,553,305	-		DZA65_RS21055	0.69	-1.1
4,553,305	-		DZA65_RS21055	0.69	-1.3
4,553,305	-		DZA65_RS21055	0.69	-0.1
4,553,305	-		DZA65_RS21055	0.69	+0.8
4,553,367	-				+1.9
4,553,392	+		DZA65_RS21055	0.87	-0.5
4,553,392	+		DZA65_RS21055	0.87	+0.9
4,553,393	-		DZA65_RS21055	0.88	-0.1
4,553,393	-		DZA65_RS21055	0.88	-0.1
4,553,393	-		DZA65_RS21055	0.88	-0.1
4,553,393	-		DZA65_RS21055	0.88	+0.1
4,553,396	+		DZA65_RS21055	0.88	+0.2
4,553,397	-		DZA65_RS21055	0.89	-0.2
4,553,436	+				+1.2
4,553,436	+				-0.5
4,553,436	+				-0.2
4,553,436	+				-0.6
4,553,436	+				+0.0
4,553,436	+				-0.7
4,553,436	+				+0.2
4,553,436	+				-0.4
4,553,437	-				-0.5
4,553,437	-				+0.0
4,553,437	-				+1.1
4,553,512	+				-1.6
4,553,548	+				+1.3
4,553,548	+				-0.4
4,553,549	-				-1.1
4,553,549	-				+1.3
4,553,549	-				-0.2
4,553,559	-				-0.8
4,553,559	-				-0.7
4,553,559	-				+0.5
4,553,559	-				-0.4
4,553,559	-				-0.2
4,553,559	-				+0.1
4,553,559	-				+0.7
4,553,581	+				+0.7
4,553,582	-				+0.5
4,553,601	+				+2.0
4,553,601	+				-1.1
4,553,601	+				+1.7
4,553,601	+				+0.3
4,553,601	+				-2.1
4,553,601	+				-0.1
4,553,601	+				-0.3
4,553,601	+				-0.2
4,553,601	+				-1.6
4,553,601	+				+0.7
4,553,602	-				-0.4
4,553,602	-				-0.3
4,553,602	-				+0.6
4,553,602	-				-1.1
4,553,602	-				-0.3
4,553,602	-				+0.9
4,553,602	-				+1.0
4,553,602	-				-0.3
4,553,602	-				+0.6
4,553,602	-				-1.1
4,553,602	-				-0.5
4,553,602	-				-0.3
4,553,602	-				-0.7
4,553,603	+				-0.7
4,553,603	+				-0.3
4,553,603	+				-0.5
4,553,603	+				-0.3
4,553,603	+				-0.1
4,553,603	+				-1.1
4,553,603	+				-0.2
4,553,603	+				+0.6
4,553,603	+				-0.7
4,553,603	+				+0.5
4,553,603	+				-0.5
4,553,603	+				-0.6
4,553,603	+				+0.2
4,553,603	+				-1.8
4,553,603	+				+0.3
4,553,603	+				+0.3
4,553,603	+				+1.5
4,553,603	+				-0.9
4,553,603	+				+0.8
4,553,603	+				+0.6
4,553,604	-				+0.4
4,553,604	-				+0.4
4,553,604	-				-1.0
4,553,604	-				-0.4
4,553,604	-				+0.8
4,553,604	-				+0.8
4,553,628	+				-0.1
4,553,628	+				+0.3
4,553,682	-		DZA65_RS21060	0.14	+0.5
4,553,726	+		DZA65_RS21060	0.19	+0.4
4,553,726	+		DZA65_RS21060	0.19	-0.5
4,553,727	-		DZA65_RS21060	0.19	-0.1
4,553,727	-		DZA65_RS21060	0.19	-0.7
4,553,820	+		DZA65_RS21060	0.29	+1.3
4,553,820	+		DZA65_RS21060	0.29	+1.0
4,553,820	+		DZA65_RS21060	0.29	+0.1
4,553,820	+		DZA65_RS21060	0.29	+1.5
4,553,820	+		DZA65_RS21060	0.29	-0.1
4,553,820	+		DZA65_RS21060	0.29	-1.4
4,553,820	+		DZA65_RS21060	0.29	-0.2
4,553,820	+		DZA65_RS21060	0.29	+1.5
4,553,820	+		DZA65_RS21060	0.29	+1.3
4,553,821	-		DZA65_RS21060	0.29	-0.4
4,553,821	-				-1.1
4,553,821	-		DZA65_RS21060	0.29	+0.7
4,553,840	+		DZA65_RS21060	0.31	+0.4
4,553,846	+		DZA65_RS21060	0.32	-0.1
4,553,846	+		DZA65_RS21060	0.32	+0.9
4,553,846	+		DZA65_RS21060	0.32	-0.4
4,553,846	+		DZA65_RS21060	0.32	+0.2
4,553,846	+		DZA65_RS21060	0.32	+1.6
4,553,846	+		DZA65_RS21060	0.32	+0.5
4,553,846	+		DZA65_RS21060	0.32	-0.7
4,553,846	+		DZA65_RS21060	0.32	-0.1
4,553,846	+		DZA65_RS21060	0.32	-1.9
4,553,847	-		DZA65_RS21060	0.32	-1.4
4,553,847	-		DZA65_RS21060	0.32	+1.3
4,553,847	-		DZA65_RS21060	0.32	+0.1
4,553,847	-		DZA65_RS21060	0.32	-1.3
4,553,847	-		DZA65_RS21060	0.32	+0.0
4,553,847	-		DZA65_RS21060	0.32	+0.9
4,553,847	-		DZA65_RS21060	0.32	-0.6
4,553,847	-		DZA65_RS21060	0.32	-1.7
4,553,847	-		DZA65_RS21060	0.32	+0.4
4,553,847	-		DZA65_RS21060	0.32	+0.8
4,553,847	-		DZA65_RS21060	0.32	-0.0
4,553,847	-		DZA65_RS21060	0.32	-0.4
4,553,847	-		DZA65_RS21060	0.32	+0.5
4,553,847	-		DZA65_RS21060	0.32	+0.0
4,553,847	-		DZA65_RS21060	0.32	-1.3
4,553,868	+		DZA65_RS21060	0.34	-0.7
4,553,869	-		DZA65_RS21060	0.34	+0.3
4,553,869	-		DZA65_RS21060	0.34	-0.4
4,553,972	-		DZA65_RS21060	0.45	+3.3
4,554,017	+		DZA65_RS21060	0.50	+0.7
4,554,103	+		DZA65_RS21060	0.60	+0.4
4,554,103	+		DZA65_RS21060	0.60	-0.8
4,554,104	-		DZA65_RS21060	0.60	-0.1
4,554,104	-		DZA65_RS21060	0.60	+0.6
4,554,104	-		DZA65_RS21060	0.60	+0.8
4,554,129	+		DZA65_RS21060	0.63	+0.6
4,554,130	-		DZA65_RS21060	0.63	+0.3
4,554,242	+		DZA65_RS21060	0.75	-0.3
4,554,242	+		DZA65_RS21060	0.75	-0.4
4,554,242	+		DZA65_RS21060	0.75	-0.4
4,554,242	+		DZA65_RS21060	0.75	+0.5
4,554,243	-		DZA65_RS21060	0.75	+0.3
4,554,243	-		DZA65_RS21060	0.75	-0.1
4,554,272	+		DZA65_RS21060	0.78	+0.3
4,554,272	+		DZA65_RS21060	0.78	-0.9
4,554,272	+		DZA65_RS21060	0.78	-0.2
4,554,273	-		DZA65_RS21060	0.78	-1.9
4,554,273	-		DZA65_RS21060	0.78	+1.1
4,554,292	-		DZA65_RS21060	0.80	+0.0
4,554,292	-		DZA65_RS21060	0.80	-0.2
4,554,333	+		DZA65_RS21060	0.85	-0.1
4,554,417	+				+1.7
4,554,417	+				-0.9
4,554,417	+				-0.7
4,554,417	+				+0.2
4,554,417	+				+1.7
4,554,417	+				-0.1
4,554,417	+				-0.7
4,554,418	-				+0.9
4,554,418	-				-0.3
4,554,420	-				+0.4
4,554,466	+				-0.4
4,554,466	+				-0.7
4,554,466	+				-1.5
4,554,466	+				+0.2
4,554,466	+				+0.9
4,554,466	+				+0.3
4,554,466	+				+0.3
4,554,466	+				-0.3
4,554,466	+				-0.1
4,554,466	+				+0.3
4,554,467	-				-0.1
4,554,467	-				+0.6
4,554,467	-				+0.7
4,554,467	-				-0.3
4,554,467	-				-0.1
4,554,467	-				+0.3
4,554,467	-				-0.4
4,554,467	-				-0.6
4,554,467	-				+0.3
4,554,467	-				+0.0
4,554,467	-				+0.2
4,554,467	-				+1.8
4,554,467	-				-0.1
4,554,467	-				+1.3
4,554,467	-				-0.3
4,554,467	-				+0.9
4,554,467	-				-1.5
4,554,486	-				-0.3
4,554,573	-		DZA65_RS21065	0.13	+0.0
4,554,605	-		DZA65_RS21065	0.16	-0.5
4,554,680	+		DZA65_RS21065	0.23	+0.3
4,554,681	-		DZA65_RS21065	0.24	-0.2
4,554,772	+		DZA65_RS21065	0.32	-0.0
4,554,772	+		DZA65_RS21065	0.32	+0.3
4,554,787	-		DZA65_RS21065	0.34	-1.2
4,554,804	+		DZA65_RS21065	0.35	+0.4
4,554,804	+		DZA65_RS21065	0.35	-0.2
4,554,804	+		DZA65_RS21065	0.35	-0.3
4,554,804	+		DZA65_RS21065	0.35	-0.3
4,554,804	+		DZA65_RS21065	0.35	-0.2
4,554,804	+		DZA65_RS21065	0.35	+0.1
4,554,804	+		DZA65_RS21065	0.35	+0.1
4,554,804	+		DZA65_RS21065	0.35	-1.2
4,554,805	-		DZA65_RS21065	0.35	-1.1
4,554,805	-		DZA65_RS21065	0.35	+2.0
4,554,805	-		DZA65_RS21065	0.35	-1.1
4,554,805	-		DZA65_RS21065	0.35	-0.8
4,554,805	-		DZA65_RS21065	0.35	-0.7
4,554,805	-		DZA65_RS21065	0.35	-0.3
4,554,805	-		DZA65_RS21065	0.35	-0.5
4,554,805	-		DZA65_RS21065	0.35	-1.1
4,554,805	-		DZA65_RS21065	0.35	-0.1
4,554,828	+		DZA65_RS21065	0.37	+0.5
4,554,828	+		DZA65_RS21065	0.37	-0.5
4,554,828	+		DZA65_RS21065	0.37	-0.7
4,554,828	+		DZA65_RS21065	0.37	-0.4
4,554,828	+		DZA65_RS21065	0.37	+0.9
4,554,828	+		DZA65_RS21065	0.37	-0.9
4,554,828	+		DZA65_RS21065	0.37	+0.1
4,554,828	+		DZA65_RS21065	0.37	-0.5
4,554,828	+		DZA65_RS21065	0.37	-0.7
4,554,828	+		DZA65_RS21065	0.37	-0.3
4,554,828	+		DZA65_RS21065	0.37	-0.6
4,554,829	-		DZA65_RS21065	0.37	-0.2
4,554,829	-		DZA65_RS21065	0.37	-0.5
4,554,829	-		DZA65_RS21065	0.37	+0.3
4,554,829	-		DZA65_RS21065	0.37	-1.3
4,554,829	-		DZA65_RS21065	0.37	-0.2
4,554,829	-		DZA65_RS21065	0.37	-0.5
4,554,829	-		DZA65_RS21065	0.37	+0.8
4,554,829	-		DZA65_RS21065	0.37	-0.3
4,554,829	-		DZA65_RS21065	0.37	-0.7
4,554,832	-				+1.7
4,554,832	-		DZA65_RS21065	0.38	+1.3
4,554,832	-		DZA65_RS21065	0.38	+0.2
4,554,875	+		DZA65_RS21065	0.42	+0.0
4,554,875	+		DZA65_RS21065	0.42	+0.4
4,554,875	+		DZA65_RS21065	0.42	-0.1
4,554,875	+		DZA65_RS21065	0.42	-0.2
4,554,905	+		DZA65_RS21065	0.45	+0.3
4,554,905	+		DZA65_RS21065	0.45	+0.5
4,554,905	+		DZA65_RS21065	0.45	-1.4
4,554,905	+		DZA65_RS21065	0.45	-0.8
4,554,906	-		DZA65_RS21065	0.45	-0.0
4,554,971	+		DZA65_RS21065	0.51	-0.8
4,555,039	-		DZA65_RS21065	0.57	-0.3
4,555,049	-		DZA65_RS21065	0.58	+0.7
4,555,049	-		DZA65_RS21065	0.58	-0.8
4,555,049	-		DZA65_RS21065	0.58	+0.1
4,555,164	-		DZA65_RS21065	0.69	-0.4
4,555,164	-		DZA65_RS21065	0.69	+0.4
4,555,165	+		DZA65_RS21065	0.69	-1.3
4,555,165	+		DZA65_RS21065	0.69	-0.2
4,555,165	+		DZA65_RS21065	0.69	+0.0
4,555,165	+		DZA65_RS21065	0.69	+0.0
4,555,166	-		DZA65_RS21065	0.69	-2.3
4,555,220	+		DZA65_RS21065	0.74	-0.6
4,555,220	+		DZA65_RS21065	0.74	-0.6
4,555,220	+		DZA65_RS21065	0.74	+0.0
4,555,220	+		DZA65_RS21065	0.74	-0.3
4,555,220	+		DZA65_RS21065	0.74	+0.3
4,555,221	-		DZA65_RS21065	0.75	-0.7
4,555,221	-		DZA65_RS21065	0.75	-0.9
4,555,221	-		DZA65_RS21065	0.75	+0.7
4,555,221	-		DZA65_RS21065	0.75	+0.3
4,555,221	-		DZA65_RS21065	0.75	+0.1
4,555,221	-		DZA65_RS21065	0.75	+0.3
4,555,224	+		DZA65_RS21065	0.75	+0.3
4,555,224	+		DZA65_RS21065	0.75	-0.2
4,555,224	+		DZA65_RS21065	0.75	-1.9
4,555,225	-		DZA65_RS21065	0.75	+0.1
4,555,225	-		DZA65_RS21065	0.75	+0.2
4,555,225	-		DZA65_RS21065	0.75	-0.7
4,555,225	-		DZA65_RS21065	0.75	+0.2
4,555,225	-		DZA65_RS21065	0.75	-2.0
4,555,225	-		DZA65_RS21065	0.75	-0.1
4,555,225	-		DZA65_RS21065	0.75	-1.9
4,555,225	-		DZA65_RS21065	0.75	-0.5
4,555,225	-		DZA65_RS21065	0.75	+0.4
4,555,308	-		DZA65_RS21065	0.83	-0.9
4,555,308	-		DZA65_RS21065	0.83	-0.3
4,555,334	+		DZA65_RS21065	0.85	+0.1
4,555,411	+				-0.9
4,555,411	+				-0.5
4,555,411	+				+0.1
4,555,411	+				-1.5
4,555,412	-				+0.6
4,555,412	-				+0.1
4,555,412	-				-1.5
4,555,412	-				-0.1