Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13635

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
2,927,462	-		DZA65_RS13635	0.21	-0.1
2,927,462	-		DZA65_RS13635	0.21	-1.3
2,927,462	-		DZA65_RS13635	0.21	-0.6
2,927,462	-		DZA65_RS13635	0.21	+0.0
2,927,462	-		DZA65_RS13635	0.21	-0.4
2,927,462	-		DZA65_RS13635	0.21	-0.8
2,927,462	-		DZA65_RS13635	0.21	-0.6
2,927,462	-		DZA65_RS13635	0.21	-0.2
2,927,466	-		DZA65_RS13635	0.21	-0.5
2,927,466	-		DZA65_RS13635	0.21	+0.2
2,927,466	-		DZA65_RS13635	0.21	-0.6
2,927,466	-		DZA65_RS13635	0.21	-1.2
2,927,466	-		DZA65_RS13635	0.21	+0.5
2,927,466	-		DZA65_RS13635	0.21	+0.3
2,927,466	-		DZA65_RS13635	0.21	+0.0
2,927,466	-		DZA65_RS13635	0.21	+0.5
2,927,466	-		DZA65_RS13635	0.21	-0.0
2,927,471	-		DZA65_RS13635	0.22	+1.8
2,927,471	-		DZA65_RS13635	0.22	-0.2
2,927,471	-		DZA65_RS13635	0.22	-2.4
2,927,516	-		DZA65_RS13635	0.26	-0.2
2,927,516	-		DZA65_RS13635	0.26	-0.2
2,927,516	-		DZA65_RS13635	0.26	+0.7
2,927,516	-		DZA65_RS13635	0.26	+0.5
2,927,516	-		DZA65_RS13635	0.26	+0.6
2,927,516	-		DZA65_RS13635	0.26	+0.0
2,927,516	-		DZA65_RS13635	0.26	+0.6
2,927,516	-				+1.5
2,927,516	-		DZA65_RS13635	0.26	+0.2
2,927,534	-		DZA65_RS13635	0.28	+0.3
2,927,534	-		DZA65_RS13635	0.28	+1.4
2,927,534	-		DZA65_RS13635	0.28	-0.2
2,927,534	-		DZA65_RS13635	0.28	+0.5
2,927,534	-		DZA65_RS13635	0.28	+0.8
2,927,534	-		DZA65_RS13635	0.28	+0.6
2,927,534	-		DZA65_RS13635	0.28	+0.5
2,927,538	-		DZA65_RS13635	0.28	+0.1
2,927,676	-		DZA65_RS13635	0.42	+0.2
2,927,676	-		DZA65_RS13635	0.42	+0.5
2,927,676	-		DZA65_RS13635	0.42	+0.8
2,927,760	-		DZA65_RS13635	0.50	+0.7
2,927,760	-				+1.8
2,927,786	-		DZA65_RS13635	0.52	-0.2
2,927,786	-		DZA65_RS13635	0.52	-0.3
2,927,786	-		DZA65_RS13635	0.52	-1.2
2,927,786	-		DZA65_RS13635	0.52	+1.2
2,927,786	-		DZA65_RS13635	0.52	+0.2
2,927,786	-		DZA65_RS13635	0.52	+1.1
2,927,786	-		DZA65_RS13635	0.52	+0.7
2,927,786	-		DZA65_RS13635	0.52	+0.3
2,927,786	-		DZA65_RS13635	0.52	-1.0
2,927,786	-		DZA65_RS13635	0.52	+0.5
2,927,786	-		DZA65_RS13635	0.52	-0.6
2,927,786	-		DZA65_RS13635	0.52	+0.3
2,927,786	-		DZA65_RS13635	0.52	+0.4
2,927,786	-		DZA65_RS13635	0.52	-0.6
2,927,786	-		DZA65_RS13635	0.52	-0.1
2,927,790	-		DZA65_RS13635	0.53	+0.8
2,927,817	-		DZA65_RS13635	0.55	+0.4
2,927,865	-		DZA65_RS13635	0.60	+0.4
2,927,865	-		DZA65_RS13635	0.60	-0.2
2,927,865	-		DZA65_RS13635	0.60	-1.2
2,927,865	-		DZA65_RS13635	0.60	+0.8
2,927,888	-		DZA65_RS13635	0.62	-0.2
2,928,023	-		DZA65_RS13635	0.75	+0.6
2,928,036	-		DZA65_RS13635	0.76	-0.0
2,928,036	-		DZA65_RS13635	0.76	+0.9
2,928,124	-		DZA65_RS13635	0.85	+0.0
2,928,156	-		DZA65_RS13635	0.88	+1.5
2,928,205	-				-0.5
2,928,205	-				+0.6
2,928,268	-				-0.2
2,928,279	-				-0.2
2,928,279	-				+0.5
2,928,279	-				+0.8
2,928,317	-				-0.4
2,928,317	-				-0.6
2,928,317	-				-0.3
2,928,345	-				+0.5
2,928,345	-				+1.3
2,928,345	-				-0.1
2,928,345	-				-0.3
2,928,345	-				+0.8
2,928,394	-		DZA65_RS13640	0.14	+0.2
2,928,394	-		DZA65_RS13640	0.14	+2.8
2,928,394	-		DZA65_RS13640	0.14	-0.2
2,928,394	-		DZA65_RS13640	0.14	+0.1
2,928,473	+		DZA65_RS13640	0.23	-1.1
2,928,474	-		DZA65_RS13640	0.24	-0.8
2,928,474	-		DZA65_RS13640	0.24	-0.2
2,928,474	-		DZA65_RS13640	0.24	+0.8
2,928,474	-		DZA65_RS13640	0.24	+0.2
2,928,474	-		DZA65_RS13640	0.24	+0.7
2,928,476	+		DZA65_RS13640	0.24	+0.3
2,928,476	+		DZA65_RS13640	0.24	-1.4
2,928,476	+		DZA65_RS13640	0.24	-0.4
2,928,476	+		DZA65_RS13640	0.24	+0.5
2,928,476	+		DZA65_RS13640	0.24	-0.6
2,928,476	+		DZA65_RS13640	0.24	+0.5
2,928,477	-				+1.0
2,928,477	-		DZA65_RS13640	0.24	+0.3
2,928,477	-		DZA65_RS13640	0.24	-0.6
2,928,477	-		DZA65_RS13640	0.24	+0.1
2,928,477	-		DZA65_RS13640	0.24	-1.2
2,928,477	-		DZA65_RS13640	0.24	-0.6
2,928,553	-		DZA65_RS13640	0.33	-0.3
2,928,553	-		DZA65_RS13640	0.33	-1.2
2,928,558	-		DZA65_RS13640	0.34	+1.8
2,928,663	+		DZA65_RS13640	0.47	+0.5
2,928,664	-		DZA65_RS13640	0.47	+0.3
2,928,664	-		DZA65_RS13640	0.47	+0.2
2,928,664	-		DZA65_RS13640	0.47	-0.8
2,928,664	-		DZA65_RS13640	0.47	+0.2
2,928,664	-		DZA65_RS13640	0.47	-0.3
2,928,664	-		DZA65_RS13640	0.47	-0.5
2,928,664	-		DZA65_RS13640	0.47	-0.7
2,928,664	-		DZA65_RS13640	0.47	+0.5
2,928,664	-		DZA65_RS13640	0.47	+0.4
2,928,664	-		DZA65_RS13640	0.47	+0.0
2,928,751	+		DZA65_RS13640	0.58	-0.8
2,928,751	+				+0.8
2,928,752	-		DZA65_RS13640	0.58	+0.5
2,928,752	-		DZA65_RS13640	0.58	-0.2
2,928,752	-		DZA65_RS13640	0.58	+0.5
2,928,752	-		DZA65_RS13640	0.58	-0.7
2,928,752	-		DZA65_RS13640	0.58	-0.1
2,928,752	-		DZA65_RS13640	0.58	-1.1
2,928,752	-		DZA65_RS13640	0.58	-0.5
2,928,752	-		DZA65_RS13640	0.58	-0.4
2,928,752	-		DZA65_RS13640	0.58	+0.1
2,928,777	-		DZA65_RS13640	0.61	+0.0
2,928,777	-		DZA65_RS13640	0.61	+0.3
2,928,782	+		DZA65_RS13640	0.62	-0.1
2,928,782	+		DZA65_RS13640	0.62	+0.9
2,928,782	+		DZA65_RS13640	0.62	+0.5
2,928,782	+		DZA65_RS13640	0.62	-1.0
2,928,782	+		DZA65_RS13640	0.62	-0.8
2,928,782	+		DZA65_RS13640	0.62	+0.8
2,928,782	+		DZA65_RS13640	0.62	-1.1
2,928,782	+		DZA65_RS13640	0.62	-0.2
2,928,782	+		DZA65_RS13640	0.62	+0.3
2,928,782	+		DZA65_RS13640	0.62	+0.4
2,928,782	+		DZA65_RS13640	0.62	+0.0
2,928,782	+		DZA65_RS13640	0.62	+1.2
2,928,782	+		DZA65_RS13640	0.62	-0.6
2,928,782	+		DZA65_RS13640	0.62	+0.1
2,928,783	-		DZA65_RS13640	0.62	-0.8
2,928,783	-		DZA65_RS13640	0.62	-0.1
2,928,783	-		DZA65_RS13640	0.62	-1.0
2,928,783	-		DZA65_RS13640	0.62	+0.4
2,928,783	-		DZA65_RS13640	0.62	-0.0
2,928,783	-		DZA65_RS13640	0.62	+0.8
2,928,783	-		DZA65_RS13640	0.62	+0.1
2,928,783	-		DZA65_RS13640	0.62	-0.4
2,928,783	-		DZA65_RS13640	0.62	+0.0
2,928,783	-		DZA65_RS13640	0.62	+0.3
2,928,783	-		DZA65_RS13640	0.62	+0.6
2,928,783	-		DZA65_RS13640	0.62	+0.7
2,928,783	-		DZA65_RS13640	0.62	-0.3
2,928,783	-		DZA65_RS13640	0.62	-0.2
2,928,783	-		DZA65_RS13640	0.62	-0.5
2,928,783	-		DZA65_RS13640	0.62	-0.6
2,928,783	-		DZA65_RS13640	0.62	-1.3
2,928,783	-		DZA65_RS13640	0.62	+0.6
2,928,783	-		DZA65_RS13640	0.62	+0.4
2,928,783	-		DZA65_RS13640	0.62	+0.3
2,928,783	-		DZA65_RS13640	0.62	+0.6
2,928,786	+		DZA65_RS13640	0.62	+0.1
2,928,930	+		DZA65_RS13640	0.80	-2.4
2,928,931	-		DZA65_RS13640	0.80	-0.8
2,928,931	-		DZA65_RS13640	0.80	+0.0
2,928,931	-		DZA65_RS13640	0.80	+1.1
2,928,962	+		DZA65_RS13640	0.84	-1.0
2,928,963	-		DZA65_RS13640	0.84	+0.2
2,928,963	-		DZA65_RS13640	0.84	+0.5
2,928,984	-		DZA65_RS13640	0.87	-0.8
2,929,032	+				+0.5
2,929,033	-				+1.0
2,929,033	-				+2.5
2,929,088	+				-0.2
2,929,088	+				+1.0
2,929,088	+				+0.1
2,929,088	+				-0.4
2,929,088	+				+0.5
2,929,088	+				+0.2
2,929,088	+				+0.5
2,929,089	-				-1.6
2,929,089	-				+1.4
2,929,089	-				+1.0
2,929,089	-				+0.3
2,929,089	-				+0.4
2,929,089	-				-0.3
2,929,089	-				-0.4
2,929,089	-				-1.2
2,929,089	-				+0.8
2,929,089	-				+0.3
2,929,089	-				-0.6
2,929,201	+				-1.0
2,929,202	-				+0.8
2,929,202	-				+0.2
2,929,266	+				-0.4