Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05135

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
1,057,955	+				-0.4
1,057,956	-				+0.0
1,058,005	+				-0.7
1,058,026	-				-0.4
1,058,036	+				-0.3
1,058,036	+				+0.5
1,058,037	-				-1.5
1,058,037	-				-0.1
1,058,088	+				-0.3
1,058,135	+				-0.6
1,058,135	+				+0.1
1,058,135	+				+0.0
1,058,135	+				-0.4
1,058,135	+				-1.7
1,058,136	-				+0.0
1,058,201	+				+0.2
1,058,203	+				-1.8
1,058,203	+				-0.3
1,058,203	+				-0.1
1,058,203	+				-0.2
1,058,203	+				-0.5
1,058,203	+				-0.2
1,058,203	+				-0.4
1,058,203	+				-0.7
1,058,203	+				-2.2
1,058,203	+				-2.3
1,058,204	-				-0.3
1,058,204	-				-0.1
1,058,233	-				-1.1
1,058,233	-				+0.0
1,058,233	-				-0.2
1,058,266	+				-1.8
1,058,266	+				-0.2
1,058,266	+				+0.8
1,058,266	+				-0.6
1,058,267	-				-1.4
1,058,267	-				-0.3
1,058,267	-				+0.0
1,058,267	-				-0.4
1,058,267	-				-1.4
1,058,268	+				-0.4
1,058,303	-				+0.1
1,058,308	+				+0.0
1,058,308	+				+0.4
1,058,309	-				-1.3
1,058,309	-				-1.6
1,058,310	+				-0.1
1,058,310	+				+0.2
1,058,310	+				-0.9
1,058,310	+				+0.8
1,058,311	-				+0.3
1,058,356	+				-0.4
1,058,357	-				-0.9
1,058,398	+				+0.2
1,058,398	+				-2.9
1,058,398	+				-0.6
1,058,398	+				+0.4
1,058,398	+				-0.3
1,058,399	-				+0.7
1,058,399	-				+0.4
1,058,419	-				+0.2
1,058,419	-				+0.4
1,058,564	+		DZA65_RS05130	0.37	-0.1
1,058,564	+		DZA65_RS05130	0.37	+0.4
1,058,564	+		DZA65_RS05130	0.37	+0.3
1,058,565	-		DZA65_RS05130	0.37	-2.6
1,058,565	-		DZA65_RS05130	0.37	-0.8
1,058,755	+		DZA65_RS05130	0.76	+0.7
1,058,757	+		DZA65_RS05130	0.77	-1.4
1,058,757	+		DZA65_RS05130	0.77	-1.6
1,058,757	+		DZA65_RS05130	0.77	-0.7
1,058,758	-		DZA65_RS05130	0.77	-0.5
1,058,758	-		DZA65_RS05130	0.77	+0.4
1,058,758	-		DZA65_RS05130	0.77	-3.2
1,058,758	-		DZA65_RS05130	0.77	-0.4
1,058,771	+		DZA65_RS05130	0.80	-0.1
1,058,771	+		DZA65_RS05130	0.80	-1.0
1,058,771	+		DZA65_RS05130	0.80	+0.0
1,058,771	+		DZA65_RS05130	0.80	+0.1
1,058,771	+		DZA65_RS05130	0.80	-0.7
1,058,771	+		DZA65_RS05130	0.80	+0.3
1,058,772	-		DZA65_RS05130	0.80	+1.0
1,058,772	-		DZA65_RS05130	0.80	-1.9
1,058,772	-		DZA65_RS05130	0.80	+0.0
1,058,798	+		DZA65_RS05130	0.85	+0.0
1,058,867	+				+0.2
1,058,867	+				-1.9
1,058,867	+				-0.7
1,058,867	+				-0.4
1,058,868	-				-0.8
1,058,868	-				-0.4
1,058,868	-				-0.6
1,058,868	-				+0.0
1,058,872	-				-1.0
1,058,872	-				+1.0
1,058,872	-				+0.0
1,058,872	-				-1.6
1,058,897	+				+0.2
1,058,897	+				-1.9
1,058,898	-				+0.5
1,058,898	-				-0.1
1,058,898	-				+0.4
1,058,898	-				+0.5
1,058,898	-				-0.1
1,058,898	-				-0.2
1,058,914	-				+0.4
1,058,979	+				+0.4
1,058,979	+				-0.8
1,058,980	-				+0.4
1,058,985	+				+1.0
1,059,037	-				-0.5
1,059,037	-				-0.6
1,059,037	-				+0.8
1,059,222	-		DZA65_RS05135	0.14	-1.3
1,059,295	+		DZA65_RS05135	0.18	+0.0
1,059,295	+		DZA65_RS05135	0.18	+0.0
1,059,296	-		DZA65_RS05135	0.18	+0.4
1,059,332	+		DZA65_RS05135	0.20	-0.9
1,059,391	-		DZA65_RS05135	0.23	-0.0
1,059,412	+		DZA65_RS05135	0.24	+1.0
1,059,412	+		DZA65_RS05135	0.24	-0.8
1,059,412	+		DZA65_RS05135	0.24	-0.2
1,059,417	-		DZA65_RS05135	0.24	-0.6
1,059,440	+		DZA65_RS05135	0.25	-1.3
1,059,441	-		DZA65_RS05135	0.25	-0.9
1,059,450	+		DZA65_RS05135	0.26	-0.7
1,059,563	+		DZA65_RS05135	0.32	+0.0
1,059,564	-		DZA65_RS05135	0.32	-2.1
1,059,564	-		DZA65_RS05135	0.32	-1.2
1,059,564	-		DZA65_RS05135	0.32	-1.0
1,059,616	-		DZA65_RS05135	0.34	+1.2
1,059,616	-		DZA65_RS05135	0.34	+0.5
1,059,707	+		DZA65_RS05135	0.39	+0.2
1,059,715	+		DZA65_RS05135	0.39	-2.4
1,059,715	+		DZA65_RS05135	0.39	+0.1
1,059,715	+		DZA65_RS05135	0.39	+1.4
1,059,746	+		DZA65_RS05135	0.41	-0.7
1,059,746	+		DZA65_RS05135	0.41	-0.5
1,059,810	+		DZA65_RS05135	0.44	-0.8
1,059,819	-		DZA65_RS05135	0.45	-0.8
1,059,819	-		DZA65_RS05135	0.45	+0.1
1,059,819	-		DZA65_RS05135	0.45	+0.1
1,059,819	-		DZA65_RS05135	0.45	-0.4
1,059,898	+		DZA65_RS05135	0.49	+2.0
1,059,899	-		DZA65_RS05135	0.49	-1.8
1,059,899	-		DZA65_RS05135	0.49	-0.6
1,059,899	-		DZA65_RS05135	0.49	-1.2
1,059,995	+		DZA65_RS05135	0.54	-0.3
1,059,995	+		DZA65_RS05135	0.54	-0.2
1,059,996	-		DZA65_RS05135	0.54	+0.2
1,060,028	+		DZA65_RS05135	0.55	-0.4
1,060,028	+		DZA65_RS05135	0.55	-1.0
1,060,029	-		DZA65_RS05135	0.55	-1.7
1,060,142	+		DZA65_RS05135	0.61	-0.8
1,060,215	+		DZA65_RS05135	0.65	+0.1
1,060,215	+		DZA65_RS05135	0.65	-1.5
1,060,269	+		DZA65_RS05135	0.68	-0.6
1,060,269	+		DZA65_RS05135	0.68	+0.6
1,060,270	-		DZA65_RS05135	0.68	-0.4
1,060,288	+		DZA65_RS05135	0.69	-1.4
1,060,289	-		DZA65_RS05135	0.69	+0.2
1,060,289	-		DZA65_RS05135	0.69	+0.0
1,060,289	-		DZA65_RS05135	0.69	-0.2
1,060,327	+		DZA65_RS05135	0.71	+0.7
1,060,327	+		DZA65_RS05135	0.71	-1.0
1,060,327	+		DZA65_RS05135	0.71	-0.5
1,060,327	+		DZA65_RS05135	0.71	-0.7
1,060,327	+		DZA65_RS05135	0.71	-0.7
1,060,327	+		DZA65_RS05135	0.71	-0.6
1,060,328	-		DZA65_RS05135	0.71	-0.4
1,060,328	-		DZA65_RS05135	0.71	-1.9
1,060,328	-		DZA65_RS05135	0.71	+0.8
1,060,328	-		DZA65_RS05135	0.71	+0.2
1,060,328	-		DZA65_RS05135	0.71	+0.8
1,060,328	-		DZA65_RS05135	0.71	-1.1
1,060,328	-		DZA65_RS05135	0.71	-1.8
1,060,328	-		DZA65_RS05135	0.71	-0.1
1,060,328	-		DZA65_RS05135	0.71	+0.3
1,060,329	+		DZA65_RS05135	0.71	-1.2
1,060,329	+		DZA65_RS05135	0.71	-0.3
1,060,329	+		DZA65_RS05135	0.71	-0.4
1,060,329	+		DZA65_RS05135	0.71	+0.6
1,060,329	+		DZA65_RS05135	0.71	-1.7
1,060,330	-		DZA65_RS05135	0.71	+0.5
1,060,330	-		DZA65_RS05135	0.71	-0.1
1,060,330	-		DZA65_RS05135	0.71	-0.8
1,060,411	+		DZA65_RS05135	0.75	+1.5
1,060,411	+		DZA65_RS05135	0.75	-0.4
1,060,411	+		DZA65_RS05135	0.75	-0.1
1,060,439	+		DZA65_RS05135	0.76	-0.6
1,060,439	+		DZA65_RS05135	0.76	-0.4
1,060,439	+		DZA65_RS05135	0.76	+0.3
1,060,439	+		DZA65_RS05135	0.76	-1.3
1,060,439	+		DZA65_RS05135	0.76	-0.4
1,060,440	-		DZA65_RS05135	0.76	-0.5
1,060,440	-		DZA65_RS05135	0.76	-0.0
1,060,440	-		DZA65_RS05135	0.76	-0.4
1,060,440	-		DZA65_RS05135	0.76	-0.6
1,060,440	-		DZA65_RS05135	0.76	-0.9
1,060,440	-		DZA65_RS05135	0.76	-1.4
1,060,492	+		DZA65_RS05135	0.79	-1.2
1,060,493	-		DZA65_RS05135	0.79	+0.2
1,060,493	-		DZA65_RS05135	0.79	+0.6
1,060,504	+		DZA65_RS05135	0.80	-1.6
1,060,504	+		DZA65_RS05135	0.80	-0.8
1,060,504	+		DZA65_RS05135	0.80	-1.6
1,060,504	+		DZA65_RS05135	0.80	+1.0
1,060,504	+		DZA65_RS05135	0.80	-2.4
1,060,504	+		DZA65_RS05135	0.80	+0.1
1,060,505	-		DZA65_RS05135	0.80	+0.1
1,060,505	-		DZA65_RS05135	0.80	-1.1
1,060,505	-		DZA65_RS05135	0.80	-0.2
1,060,505	-		DZA65_RS05135	0.80	-1.9
1,060,505	-		DZA65_RS05135	0.80	-0.3
1,060,505	-		DZA65_RS05135	0.80	-1.0
1,060,520	+		DZA65_RS05135	0.81	-0.1
1,060,521	-		DZA65_RS05135	0.81	-0.1
1,060,521	-		DZA65_RS05135	0.81	-2.0
1,060,521	-		DZA65_RS05135	0.81	-0.2
1,060,521	-		DZA65_RS05135	0.81	+0.0
1,060,529	+		DZA65_RS05135	0.81	-0.2
1,060,530	-		DZA65_RS05135	0.81	-0.8
1,060,568	-		DZA65_RS05135	0.83	-0.6
1,060,568	-		DZA65_RS05135	0.83	+0.3
1,060,621	+		DZA65_RS05135	0.86	+0.1
1,060,621	+		DZA65_RS05135	0.86	-0.6
1,060,621	+		DZA65_RS05135	0.86	-0.1
1,060,621	+		DZA65_RS05135	0.86	+0.6
1,060,621	+		DZA65_RS05135	0.86	-0.6
1,060,621	+		DZA65_RS05135	0.86	+0.1
1,060,621	+		DZA65_RS05135	0.86	-2.8
1,060,622	-		DZA65_RS05135	0.86	+0.6
1,060,622	-		DZA65_RS05135	0.86	+1.2
1,060,646	+		DZA65_RS05135	0.87	+0.4
1,060,711	+				-0.6
1,060,711	+				-0.7
1,060,711	+				+1.0
1,060,711	+				-0.2
1,060,711	+				+1.2
1,060,711	+				+0.0
1,060,711	+				-1.1
1,060,711	+				-0.2
1,060,711	+				-1.3
1,060,711	+				+0.6
1,060,711	+				+1.0
1,060,711	+				-0.5
1,060,712	-				-1.0
1,060,712	-				-0.1
1,060,712	-				+0.4
1,060,712	-				-2.0
1,060,712	-				-0.6
1,060,712	-				+0.0
1,060,712	-				+0.6
1,060,712	-				-1.0
1,060,712	-				+0.1
1,060,712	-				-1.0
1,060,712	-				-0.2
1,060,712	-				-0.4
1,060,712	-				-0.1
1,060,712	-				+0.3
1,060,715	+				-0.9
1,060,715	+				-0.7
1,060,715	+				+0.8
1,060,715	+				-0.7
1,060,715	+				-0.3
1,060,715	+				-1.6
1,060,715	+				+0.2
1,060,715	+				+0.0
1,060,716	-				+0.2
1,060,716	-				-0.3
1,060,716	-				+0.4
1,060,716	-				+0.6
1,060,716	-				+0.0
1,060,716	-				+0.8
1,060,716	-				-0.3
1,060,716	-				-0.1
1,060,716	-				-1.0
1,060,716	-				+0.5
1,060,716	-				-0.1
1,060,716	-				-0.8
1,060,722	-				+0.6
1,060,722	-				-0.4
1,060,752	+				+0.0
1,060,758	+				+0.2
1,060,758	+				-1.8
1,060,794	-				+1.2
1,060,804	+				+0.7
1,060,804	+				-0.4
1,060,804	+				+0.2
1,060,804	+				-0.4
1,060,804	+				+0.0
1,060,805	-				+0.2
1,060,805	-				-1.0
1,060,805	-				-0.5
1,060,805	-				-0.4
1,060,826	-				+0.2
1,060,904	+				+0.9
1,060,904	+				+0.2
1,060,905	-				-0.3
1,060,905	-				-0.5
1,060,976	+				-0.3
1,060,977	-				+0.0
1,060,991	+				-0.2
1,060,992	-				+0.7
1,060,995	+				+0.3
1,060,995	+				-0.3
1,060,995	+				+0.1
1,060,995	+				-0.3
1,060,995	+				+0.1
1,060,996	-				+0.3
1,060,996	-				-1.2
1,060,996	-				+0.3
1,061,001	-				+0.4
1,061,020	+				-2.0
1,061,020	+				+0.3
1,061,020	+				+0.9
1,061,021	-				+0.8
1,061,021	-				-2.0
1,061,021	-				-1.0
1,061,079	+		DZA65_RS05140	0.11	-0.2
1,061,079	+		DZA65_RS05140	0.11	-0.4
1,061,079	+		DZA65_RS05140	0.11	+0.3
1,061,079	+		DZA65_RS05140	0.11	-1.0
1,061,079	+		DZA65_RS05140	0.11	+0.1
1,061,080	-		DZA65_RS05140	0.11	+0.2
1,061,080	-		DZA65_RS05140	0.11	-0.3
1,061,080	-		DZA65_RS05140	0.11	+0.0
1,061,080	-		DZA65_RS05140	0.11	-0.2
1,061,080	-		DZA65_RS05140	0.11	-1.2
1,061,085	-		DZA65_RS05140	0.12	-0.5
1,061,186	+		DZA65_RS05140	0.23	-0.9
1,061,186	+		DZA65_RS05140	0.23	+0.0
1,061,186	+		DZA65_RS05140	0.23	-0.1
1,061,187	-		DZA65_RS05140	0.23	+0.6
1,061,250	+		DZA65_RS05140	0.30	-0.6
1,061,250	+		DZA65_RS05140	0.30	-1.6
1,061,250	+		DZA65_RS05140	0.30	+0.3
1,061,250	+		DZA65_RS05140	0.30	-1.1
1,061,250	+		DZA65_RS05140	0.30	-0.7
1,061,251	-		DZA65_RS05140	0.30	+0.4
1,061,251	-		DZA65_RS05140	0.30	-0.5
1,061,265	+		DZA65_RS05140	0.31	-0.0
1,061,265	+		DZA65_RS05140	0.31	-0.5
1,061,265	+		DZA65_RS05140	0.31	-0.4
1,061,265	+		DZA65_RS05140	0.31	-0.5
1,061,265	+		DZA65_RS05140	0.31	+0.4
1,061,265	+		DZA65_RS05140	0.31	-1.6
1,061,266	-		DZA65_RS05140	0.31	+0.7
1,061,266	-		DZA65_RS05140	0.31	+0.2
1,061,266	-		DZA65_RS05140	0.31	+0.3
1,061,266	-		DZA65_RS05140	0.31	-0.4
1,061,266	-		DZA65_RS05140	0.31	-2.8
1,061,266	-		DZA65_RS05140	0.31	-0.1
1,061,266	-		DZA65_RS05140	0.31	-0.6
1,061,266	-		DZA65_RS05140	0.31	-0.0
1,061,266	-		DZA65_RS05140	0.31	-0.6
1,061,266	-		DZA65_RS05140	0.31	-1.4
1,061,266	-		DZA65_RS05140	0.31	-1.8
1,061,266	-		DZA65_RS05140	0.31	+0.1
1,061,266	-		DZA65_RS05140	0.31	-0.8
1,061,267	+		DZA65_RS05140	0.31	+1.0
1,061,267	+		DZA65_RS05140	0.31	+0.0
1,061,267	+		DZA65_RS05140	0.31	+0.0
1,061,267	+		DZA65_RS05140	0.31	-0.4
1,061,267	+		DZA65_RS05140	0.31	-0.2
1,061,267	+		DZA65_RS05140	0.31	+0.2
1,061,268	-		DZA65_RS05140	0.32	+1.2
1,061,268	-		DZA65_RS05140	0.32	-0.1
1,061,329	+		DZA65_RS05140	0.38	-0.9
1,061,329	+		DZA65_RS05140	0.38	-0.9
1,061,330	-		DZA65_RS05140	0.38	-0.6
1,061,330	-		DZA65_RS05140	0.38	-1.8
1,061,330	-		DZA65_RS05140	0.38	-0.3
1,061,330	-		DZA65_RS05140	0.38	-1.4
1,061,330	-		DZA65_RS05140	0.38	+0.7
1,061,330	-		DZA65_RS05140	0.38	+0.2
1,061,442	-		DZA65_RS05140	0.50	-0.9
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1,061,488	-		DZA65_RS05140	0.55	+0.2
1,061,537	+		DZA65_RS05140	0.61	+0.0
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1,061,605	+		DZA65_RS05140	0.68	-0.2
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1,061,605	+		DZA65_RS05140	0.68	-0.3
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1,061,606	-		DZA65_RS05140	0.68	-0.4
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1,061,609	+		DZA65_RS05140	0.69	-1.8
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1,061,609	+		DZA65_RS05140	0.69	-0.5
1,061,609	+		DZA65_RS05140	0.69	+1.3
1,061,609	+		DZA65_RS05140	0.69	-1.7
1,061,609	+		DZA65_RS05140	0.69	+1.2
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1,061,610	-		DZA65_RS05140	0.69	+0.3
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1,061,610	-		DZA65_RS05140	0.69	-1.0
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1,061,610	-		DZA65_RS05140	0.69	-0.1
1,061,610	-		DZA65_RS05140	0.69	-2.0
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1,061,631	+		DZA65_RS05140	0.71	+0.0
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1,061,632	-		DZA65_RS05140	0.71	+0.2
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1,061,643	+				+2.0
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1,061,645	+		DZA65_RS05140	0.73	-1.2
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1,061,646	-		DZA65_RS05140	0.73	+0.1
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1,061,666	+		DZA65_RS05140	0.75	-1.2
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1,061,666	+		DZA65_RS05140	0.75	+0.6
1,061,672	+		DZA65_RS05140	0.75	+0.1
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1,061,686	+		DZA65_RS05140	0.77	-0.4
1,061,698	+		DZA65_RS05140	0.78	-0.4
1,061,699	-		DZA65_RS05140	0.78	+0.1
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1,061,699	-		DZA65_RS05140	0.78	-1.7
1,061,703	+		DZA65_RS05140	0.79	+1.0
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1,061,708	+		DZA65_RS05140	0.79	-0.7
1,061,762	+		DZA65_RS05140	0.85	-0.0
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1,061,775	+		DZA65_RS05140	0.87	+0.7