Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00485

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
114,601	+		DZA65_RS00480	0.37	+0.6
114,602	-		DZA65_RS00480	0.37	-2.0
114,617	-		DZA65_RS00480	0.38	-1.2
114,643	+		DZA65_RS00480	0.40	-0.0
114,649	+		DZA65_RS00480	0.40	+0.2
114,649	+		DZA65_RS00480	0.40	-0.2
114,649	+		DZA65_RS00480	0.40	-0.7
114,650	-		DZA65_RS00480	0.40	-0.4
114,650	-		DZA65_RS00480	0.40	-2.5
114,650	-		DZA65_RS00480	0.40	+0.3
114,650	-		DZA65_RS00480	0.40	-0.3
114,650	-		DZA65_RS00480	0.40	-2.0
114,650	-		DZA65_RS00480	0.40	+0.1
114,650	-		DZA65_RS00480	0.40	-2.3
114,650	-		DZA65_RS00480	0.40	-0.7
114,686	+				-0.0
114,687	-		DZA65_RS00480	0.43	+0.3
114,687	-		DZA65_RS00480	0.43	-0.6
114,687	-		DZA65_RS00480	0.43	+0.1
114,778	+		DZA65_RS00480	0.49	-1.5
114,778	+		DZA65_RS00480	0.49	-1.5
114,778	+		DZA65_RS00480	0.49	+0.0
114,778	+		DZA65_RS00480	0.49	+0.3
114,778	+		DZA65_RS00480	0.49	+0.1
114,779	-		DZA65_RS00480	0.49	-0.7
114,779	-		DZA65_RS00480	0.49	+1.3
114,779	-		DZA65_RS00480	0.49	+0.9
114,779	-		DZA65_RS00480	0.49	-0.5
114,779	-		DZA65_RS00480	0.49	-1.9
114,779	-		DZA65_RS00480	0.49	-0.7
114,779	-		DZA65_RS00480	0.49	-0.3
114,779	-		DZA65_RS00480	0.49	-0.2
114,779	-		DZA65_RS00480	0.49	+0.6
114,779	-		DZA65_RS00480	0.49	-0.7
114,816	+		DZA65_RS00480	0.51	+0.6
114,816	+		DZA65_RS00480	0.51	-0.3
114,816	+		DZA65_RS00480	0.51	+0.6
114,816	+		DZA65_RS00480	0.51	+0.2
114,822	+		DZA65_RS00480	0.52	-1.5
114,822	+		DZA65_RS00480	0.52	-0.6
114,822	+		DZA65_RS00480	0.52	+0.6
114,822	+		DZA65_RS00480	0.52	+0.4
114,822	+		DZA65_RS00480	0.52	+0.8
114,822	+		DZA65_RS00480	0.52	-1.6
114,822	+		DZA65_RS00480	0.52	-0.2
114,822	+		DZA65_RS00480	0.52	-1.9
114,822	+		DZA65_RS00480	0.52	+0.3
114,822	+		DZA65_RS00480	0.52	-0.8
114,822	+		DZA65_RS00480	0.52	+0.3
114,822	+		DZA65_RS00480	0.52	-0.9
114,822	+		DZA65_RS00480	0.52	+0.9
114,822	+		DZA65_RS00480	0.52	-0.0
114,822	+		DZA65_RS00480	0.52	-2.3
114,822	+		DZA65_RS00480	0.52	-0.1
114,822	+		DZA65_RS00480	0.52	+0.8
114,822	+		DZA65_RS00480	0.52	-0.3
114,822	+		DZA65_RS00480	0.52	-0.8
114,822	+		DZA65_RS00480	0.52	-1.3
114,823	-		DZA65_RS00480	0.52	+0.4
114,823	-		DZA65_RS00480	0.52	-0.9
114,823	-		DZA65_RS00480	0.52	-0.4
114,823	-		DZA65_RS00480	0.52	-0.6
114,823	-		DZA65_RS00480	0.52	+0.9
114,823	-				+2.0
114,823	-		DZA65_RS00480	0.52	+0.6
114,823	-		DZA65_RS00480	0.52	-0.5
114,823	-		DZA65_RS00480	0.52	+0.4
114,823	-		DZA65_RS00480	0.52	-1.5
114,823	-		DZA65_RS00480	0.52	-0.4
114,823	-		DZA65_RS00480	0.52	-1.2
114,823	-		DZA65_RS00480	0.52	+0.3
114,823	-		DZA65_RS00480	0.52	-1.3
114,823	-		DZA65_RS00480	0.52	-0.0
114,843	+		DZA65_RS00480	0.53	-0.4
114,843	+		DZA65_RS00480	0.53	+0.2
114,843	+		DZA65_RS00480	0.53	-0.8
114,844	-		DZA65_RS00480	0.53	+0.3
114,844	-		DZA65_RS00480	0.53	-0.9
114,910	-		DZA65_RS00480	0.57	-0.9
114,910	-		DZA65_RS00480	0.57	-1.5
114,912	+		DZA65_RS00480	0.57	+0.3
114,912	+		DZA65_RS00480	0.57	-0.4
114,912	+		DZA65_RS00480	0.57	-0.1
114,913	-		DZA65_RS00480	0.57	+0.7
114,913	-		DZA65_RS00480	0.57	-0.1
114,913	-		DZA65_RS00480	0.57	-0.4
114,913	-		DZA65_RS00480	0.57	+0.6
114,913	-		DZA65_RS00480	0.57	-1.0
114,913	-		DZA65_RS00480	0.57	-0.0
114,913	-		DZA65_RS00480	0.57	-1.5
114,913	-		DZA65_RS00480	0.57	-0.1
114,916	-		DZA65_RS00480	0.58	-0.4
114,973	-		DZA65_RS00480	0.61	+0.5
114,973	-		DZA65_RS00480	0.61	-0.5
114,993	+		DZA65_RS00480	0.63	-0.9
114,993	+		DZA65_RS00480	0.63	+1.1
114,993	+		DZA65_RS00480	0.63	-2.6
114,993	+				+0.7
114,993	+		DZA65_RS00480	0.63	+0.4
114,993	+		DZA65_RS00480	0.63	-1.4
114,993	+		DZA65_RS00480	0.63	+0.1
114,993	+		DZA65_RS00480	0.63	-0.2
114,994	-		DZA65_RS00480	0.63	-0.8
114,994	-		DZA65_RS00480	0.63	-1.0
114,994	-		DZA65_RS00480	0.63	-0.5
114,994	-		DZA65_RS00480	0.63	-0.2
114,994	-		DZA65_RS00480	0.63	-0.0
114,994	-				-0.3
114,994	-		DZA65_RS00480	0.63	-0.7
115,049	+		DZA65_RS00480	0.66	-0.2
115,049	+		DZA65_RS00480	0.66	-0.7
115,049	+		DZA65_RS00480	0.66	-0.0
115,049	+		DZA65_RS00480	0.66	+0.0
115,049	+		DZA65_RS00480	0.66	-0.3
115,050	-		DZA65_RS00480	0.66	-0.1
115,050	-		DZA65_RS00480	0.66	-1.0
115,050	-		DZA65_RS00480	0.66	-0.7
115,050	-		DZA65_RS00480	0.66	-0.0
115,050	-		DZA65_RS00480	0.66	+0.6
115,050	-		DZA65_RS00480	0.66	-0.1
115,050	-		DZA65_RS00480	0.66	-0.0
115,050	-		DZA65_RS00480	0.66	-0.5
115,050	-		DZA65_RS00480	0.66	-0.7
115,050	-		DZA65_RS00480	0.66	-0.3
115,050	-		DZA65_RS00480	0.66	-0.3
115,050	-		DZA65_RS00480	0.66	-0.2
115,050	-		DZA65_RS00480	0.66	-0.2
115,050	-		DZA65_RS00480	0.66	+0.3
115,050	-		DZA65_RS00480	0.66	-0.9
115,050	-		DZA65_RS00480	0.66	+0.9
115,084	+		DZA65_RS00480	0.69	-0.7
115,084	+		DZA65_RS00480	0.69	+0.2
115,084	+		DZA65_RS00480	0.69	-0.3
115,084	+		DZA65_RS00480	0.69	+0.0
115,084	+		DZA65_RS00480	0.69	-0.3
115,085	-		DZA65_RS00480	0.69	-0.7
115,085	-		DZA65_RS00480	0.69	+0.4
115,133	+		DZA65_RS00480	0.72	+0.4
115,133	+		DZA65_RS00480	0.72	-0.2
115,133	+		DZA65_RS00480	0.72	-0.9
115,133	+		DZA65_RS00480	0.72	-0.6
115,133	+		DZA65_RS00480	0.72	+0.5
115,133	+		DZA65_RS00480	0.72	+1.3
115,133	+		DZA65_RS00480	0.72	-1.9
115,134	-		DZA65_RS00480	0.72	-1.2
115,134	-		DZA65_RS00480	0.72	+0.2
115,134	-		DZA65_RS00480	0.72	-2.7
115,134	-		DZA65_RS00480	0.72	-0.4
115,134	-		DZA65_RS00480	0.72	+1.3
115,134	-		DZA65_RS00480	0.72	+0.3
115,134	-		DZA65_RS00480	0.72	-2.0
115,134	-		DZA65_RS00480	0.72	-0.7
115,144	+		DZA65_RS00480	0.73	+0.2
115,144	+		DZA65_RS00480	0.73	+2.0
115,144	+		DZA65_RS00480	0.73	+0.2
115,144	+		DZA65_RS00480	0.73	-0.2
115,145	-		DZA65_RS00480	0.73	+0.1
115,145	-		DZA65_RS00480	0.73	-1.0
115,145	-		DZA65_RS00480	0.73	-0.0
115,156	+		DZA65_RS00480	0.73	+0.0
115,156	+		DZA65_RS00480	0.73	+0.3
115,156	+		DZA65_RS00480	0.73	+0.1
115,156	+		DZA65_RS00480	0.73	-0.6
115,156	+		DZA65_RS00480	0.73	-0.0
115,156	+		DZA65_RS00480	0.73	+0.6
115,156	+		DZA65_RS00480	0.73	-0.4
115,156	+		DZA65_RS00480	0.73	-0.2
115,156	+		DZA65_RS00480	0.73	+0.3
115,156	+		DZA65_RS00480	0.73	-0.6
115,156	+		DZA65_RS00480	0.73	-1.3
115,157	-		DZA65_RS00480	0.73	-0.2
115,157	-		DZA65_RS00480	0.73	-0.8
115,157	-		DZA65_RS00480	0.73	-0.7
115,157	-		DZA65_RS00480	0.73	-0.6
115,157	-		DZA65_RS00480	0.73	-0.9
115,157	-		DZA65_RS00480	0.73	-1.0
115,157	-		DZA65_RS00480	0.73	-1.2
115,157	-		DZA65_RS00480	0.73	-0.2
115,158	+		DZA65_RS00480	0.74	+0.9
115,158	+		DZA65_RS00480	0.74	-0.1
115,158	+		DZA65_RS00480	0.74	-1.6
115,158	+		DZA65_RS00480	0.74	-2.9
115,159	-		DZA65_RS00480	0.74	-0.3
115,159	-		DZA65_RS00480	0.74	-0.7
115,159	-		DZA65_RS00480	0.74	-0.5
115,171	+		DZA65_RS00480	0.74	-0.2
115,171	+		DZA65_RS00480	0.74	+0.2
115,171	+		DZA65_RS00480	0.74	+0.7
115,171	+		DZA65_RS00480	0.74	+1.3
115,171	+		DZA65_RS00480	0.74	-0.8
115,171	+		DZA65_RS00480	0.74	+0.1
115,172	-		DZA65_RS00480	0.74	-0.6
115,179	+		DZA65_RS00480	0.75	-0.6
115,180	-		DZA65_RS00480	0.75	-0.3
115,197	+		DZA65_RS00480	0.76	-0.6
115,197	+		DZA65_RS00480	0.76	-0.5
115,198	-		DZA65_RS00480	0.76	-0.2
115,198	-		DZA65_RS00480	0.76	+0.3
115,258	+		DZA65_RS00480	0.80	+2.1
115,267	+		DZA65_RS00480	0.81	-0.5
115,267	+		DZA65_RS00480	0.81	+2.5
115,267	+		DZA65_RS00480	0.81	-0.8
115,267	+		DZA65_RS00480	0.81	-1.0
115,267	+		DZA65_RS00480	0.81	+1.1
115,267	+		DZA65_RS00480	0.81	-0.3
115,267	+		DZA65_RS00480	0.81	-2.4
115,267	+		DZA65_RS00480	0.81	+0.3
115,268	-		DZA65_RS00480	0.81	-0.7
115,268	-		DZA65_RS00480	0.81	-0.0
115,268	-		DZA65_RS00480	0.81	-1.2
115,268	-		DZA65_RS00480	0.81	-0.3
115,268	-		DZA65_RS00480	0.81	-0.5
115,268	-		DZA65_RS00480	0.81	+0.6
115,268	-		DZA65_RS00480	0.81	-0.5
115,268	-		DZA65_RS00480	0.81	-0.3
115,276	+		DZA65_RS00480	0.81	-0.1
115,276	+		DZA65_RS00480	0.81	-1.3
115,277	-		DZA65_RS00480	0.81	-0.1
115,277	-		DZA65_RS00480	0.81	-0.4
115,277	-		DZA65_RS00480	0.81	+0.1
115,277	-		DZA65_RS00480	0.81	-0.5
115,296	+		DZA65_RS00480	0.83	-0.3
115,378	+		DZA65_RS00480	0.88	-0.1
115,379	-		DZA65_RS00480	0.88	+0.8
115,379	-		DZA65_RS00480	0.88	-0.4
115,379	-		DZA65_RS00480	0.88	-0.6
115,379	-		DZA65_RS00480	0.88	-1.2
115,394	+		DZA65_RS00480	0.89	-0.2
115,394	+		DZA65_RS00480	0.89	+0.0
115,395	-		DZA65_RS00480	0.89	-0.2
115,438	+				+0.4
115,438	+				-0.3
115,439	-				-0.5
115,439	-				+3.3
115,439	-				-1.6
115,439	-				+0.6
115,439	-				-0.7
115,439	-				-1.0
115,439	-				-0.4
115,439	-				-0.4
115,439	-				-1.0
115,447	+				+0.3
115,459	+				+1.3
115,459	+				-0.0
115,459	+				+0.0
115,459	+				-0.5
115,459	+				-1.6
115,459	+				+0.2
115,460	-				-0.4
115,460	-				+0.9
115,460	-				-0.7
115,460	-				-0.1
115,460	-				-0.7
115,473	+				+0.7
115,473	+				+0.8
115,473	+				-0.4
115,473	+				-0.0
115,473	+				-0.5
115,474	-				-1.1
115,474	-				-0.4
115,474	-				-0.3
115,474	-				+0.6
115,474	-				+0.7
115,474	-				-0.2
115,474	-				-2.0
115,474	-				-0.7
115,475	+				-1.9
115,475	+				+1.2
115,475	+				+2.9
115,475	+				-0.2
115,475	+				+0.2
115,476	-				-0.2
115,476	-				-0.3
115,476	-				-0.1
115,501	+				-0.6
115,501	+				-0.4
115,501	+				-1.0
115,501	+				-0.7
115,501	+				-1.1
115,502	-				+0.1
115,502	-				+0.8
115,502	-				-0.4
115,502	-				-1.4
115,502	-				-0.3
115,543	-				-0.4
115,561	-				-1.3
115,561	-				+0.9
115,666	+				-0.4
115,666	+				+0.5
115,666	+				+0.3
115,666	+				+0.1
115,666	+				+0.2
115,666	+				+0.8
115,666	+				-0.4
115,666	+				+0.5
115,666	+				-1.0
115,666	+				+0.0
115,666	+				-0.2
115,666	+				+1.3
115,667	-				-0.1
115,667	-				-1.4
115,667	-				+0.2
115,667	-				-0.7
115,667	-				-0.7
115,667	-				-0.8
115,668	+				+0.4
115,668	+				-1.2
115,668	+				+0.3
115,668	+				+0.2
115,668	+				-0.6
115,668	+				-2.3
115,668	+				-1.7
115,668	+				-1.0
115,668	+				-0.8
115,668	+				+0.0
115,669	-				+0.7
115,669	-				-1.2
115,669	-				-0.5
115,669	-				-1.3
115,669	-				-0.2
115,669	-				-0.3
115,669	-				+1.1
115,669	-				+0.1
115,669	-				-0.2
115,669	-				-1.0
115,669	-				+1.0
115,669	-				-2.2
115,669	-				-0.2
115,688	+				-0.4
115,689	-				-1.3
115,689	-				-0.3
115,689	-				-1.5
115,692	+				-0.7
115,693	-				+0.9
115,693	-				+0.3
115,714	+		DZA65_RS00485	0.11	-0.2
115,715	-		DZA65_RS00485	0.11	+1.1
115,797	-		DZA65_RS00485	0.17	-0.5
115,849	-		DZA65_RS00485	0.20	+0.3
115,890	+		DZA65_RS00485	0.23	+0.3
115,890	+		DZA65_RS00485	0.23	-0.0
115,890	+		DZA65_RS00485	0.23	+0.1
115,890	+		DZA65_RS00485	0.23	-0.5
115,891	-		DZA65_RS00485	0.23	-1.6
115,891	-		DZA65_RS00485	0.23	-2.2
115,891	-		DZA65_RS00485	0.23	+0.3
115,891	-		DZA65_RS00485	0.23	+2.1
115,891	-		DZA65_RS00485	0.23	-0.0
115,996	-		DZA65_RS00485	0.29	+0.6
116,088	+		DZA65_RS00485	0.35	+0.6
116,088	+		DZA65_RS00485	0.35	-0.3
116,088	+		DZA65_RS00485	0.35	-0.7
116,088	+		DZA65_RS00485	0.35	-1.4
116,089	-		DZA65_RS00485	0.35	+0.2
116,089	-		DZA65_RS00485	0.35	+1.3
116,089	-		DZA65_RS00485	0.35	-1.1
116,158	+		DZA65_RS00485	0.40	+0.8
116,158	+		DZA65_RS00485	0.40	-1.7
116,158	+		DZA65_RS00485	0.40	-0.6
116,158	+		DZA65_RS00485	0.40	+0.1
116,159	-		DZA65_RS00485	0.40	-1.2
116,159	-		DZA65_RS00485	0.40	+1.0
116,159	-		DZA65_RS00485	0.40	-0.4
116,159	-		DZA65_RS00485	0.40	-1.9
116,159	-		DZA65_RS00485	0.40	-2.3
116,159	-		DZA65_RS00485	0.40	+0.0
116,159	-				+2.6
116,159	-		DZA65_RS00485	0.40	-2.5
116,175	+		DZA65_RS00485	0.41	-0.9
116,175	+		DZA65_RS00485	0.41	-0.9
116,176	-		DZA65_RS00485	0.41	-1.7
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116,176	-		DZA65_RS00485	0.41	+1.1
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116,179	+		DZA65_RS00485	0.41	-1.9
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