Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21880

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,731,601	-		DZA65_RS21875	0.61	-1.1
4,731,669	+		DZA65_RS21875	0.65	-1.0
4,731,669	+		DZA65_RS21875	0.65	+0.6
4,731,669	+		DZA65_RS21875	0.65	+0.9
4,731,669	+		DZA65_RS21875	0.65	+0.4
4,731,670	-		DZA65_RS21875	0.65	-0.7
4,731,670	-		DZA65_RS21875	0.65	-1.7
4,731,670	-		DZA65_RS21875	0.65	-0.3
4,731,675	+		DZA65_RS21875	0.65	-0.3
4,731,675	+		DZA65_RS21875	0.65	+0.3
4,731,675	+		DZA65_RS21875	0.65	-0.1
4,731,675	+		DZA65_RS21875	0.65	+0.7
4,731,675	+		DZA65_RS21875	0.65	+0.1
4,731,675	+		DZA65_RS21875	0.65	-1.3
4,731,676	-		DZA65_RS21875	0.65	-2.1
4,731,856	+		DZA65_RS21875	0.74	-0.1
4,731,856	+		DZA65_RS21875	0.74	-1.4
4,731,856	+		DZA65_RS21875	0.74	-0.3
4,731,856	+		DZA65_RS21875	0.74	-0.0
4,731,856	+		DZA65_RS21875	0.74	+1.0
4,731,856	+		DZA65_RS21875	0.74	+1.2
4,731,856	+		DZA65_RS21875	0.74	-0.8
4,731,856	+		DZA65_RS21875	0.74	+0.2
4,731,856	+		DZA65_RS21875	0.74	+0.5
4,731,856	+		DZA65_RS21875	0.74	-1.6
4,731,857	-		DZA65_RS21875	0.74	-0.7
4,731,857	-		DZA65_RS21875	0.74	+0.7
4,731,857	-		DZA65_RS21875	0.74	-1.1
4,731,857	-		DZA65_RS21875	0.74	-0.9
4,731,857	-		DZA65_RS21875	0.74	-0.4
4,731,858	+		DZA65_RS21875	0.74	-0.7
4,731,858	+		DZA65_RS21875	0.74	+0.5
4,731,858	+		DZA65_RS21875	0.74	-1.3
4,731,859	-		DZA65_RS21875	0.74	-0.9
4,731,859	-		DZA65_RS21875	0.74	-0.3
4,731,859	-		DZA65_RS21875	0.74	-1.7
4,731,921	+		DZA65_RS21875	0.77	+0.5
4,731,922	-		DZA65_RS21875	0.77	+0.3
4,731,922	-		DZA65_RS21875	0.77	-1.4
4,731,922	-		DZA65_RS21875	0.77	-1.1
4,731,973	+		DZA65_RS21875	0.79	+1.1
4,731,974	-		DZA65_RS21875	0.79	-0.4
4,731,974	-		DZA65_RS21875	0.79	+1.3
4,732,000	+		DZA65_RS21875	0.80	-0.9
4,732,002	+		DZA65_RS21875	0.81	+0.5
4,732,002	+		DZA65_RS21875	0.81	-0.5
4,732,002	+		DZA65_RS21875	0.81	+0.2
4,732,003	-		DZA65_RS21875	0.81	-1.1
4,732,003	-				+0.9
4,732,003	-		DZA65_RS21875	0.81	-1.1
4,732,003	-		DZA65_RS21875	0.81	-0.8
4,732,003	-		DZA65_RS21875	0.81	+0.8
4,732,003	-		DZA65_RS21875	0.81	+0.9
4,732,003	-		DZA65_RS21875	0.81	+0.6
4,732,003	-		DZA65_RS21875	0.81	-1.5
4,732,012	+		DZA65_RS21875	0.81	+0.3
4,732,014	+		DZA65_RS21875	0.81	+0.7
4,732,014	+		DZA65_RS21875	0.81	-0.1
4,732,014	+		DZA65_RS21875	0.81	-0.3
4,732,014	+				+1.7
4,732,014	+		DZA65_RS21875	0.81	-0.3
4,732,014	+		DZA65_RS21875	0.81	-0.5
4,732,014	+		DZA65_RS21875	0.81	-2.3
4,732,014	+		DZA65_RS21875	0.81	+0.8
4,732,014	+		DZA65_RS21875	0.81	-0.5
4,732,014	+		DZA65_RS21875	0.81	-0.6
4,732,014	+		DZA65_RS21875	0.81	-0.6
4,732,014	+		DZA65_RS21875	0.81	-0.1
4,732,014	+		DZA65_RS21875	0.81	+1.5
4,732,014	+		DZA65_RS21875	0.81	-1.0
4,732,014	+		DZA65_RS21875	0.81	+0.4
4,732,014	+		DZA65_RS21875	0.81	-0.6
4,732,014	+		DZA65_RS21875	0.81	+0.9
4,732,014	+		DZA65_RS21875	0.81	+0.2
4,732,014	+		DZA65_RS21875	0.81	-1.1
4,732,014	+		DZA65_RS21875	0.81	+1.2
4,732,014	+		DZA65_RS21875	0.81	+1.9
4,732,014	+		DZA65_RS21875	0.81	-0.0
4,732,014	+		DZA65_RS21875	0.81	-0.4
4,732,014	+		DZA65_RS21875	0.81	+0.8
4,732,014	+		DZA65_RS21875	0.81	+0.0
4,732,014	+		DZA65_RS21875	0.81	-0.9
4,732,014	+		DZA65_RS21875	0.81	+0.1
4,732,014	+		DZA65_RS21875	0.81	+0.5
4,732,014	+		DZA65_RS21875	0.81	-0.5
4,732,014	+		DZA65_RS21875	0.81	-1.0
4,732,014	+		DZA65_RS21875	0.81	-0.0
4,732,014	+		DZA65_RS21875	0.81	-0.9
4,732,014	+		DZA65_RS21875	0.81	+0.5
4,732,014	+		DZA65_RS21875	0.81	-0.4
4,732,014	+		DZA65_RS21875	0.81	-0.6
4,732,014	+		DZA65_RS21875	0.81	+0.2
4,732,014	+		DZA65_RS21875	0.81	+0.5
4,732,015	-		DZA65_RS21875	0.81	-1.0
4,732,015	-		DZA65_RS21875	0.81	-1.0
4,732,015	-		DZA65_RS21875	0.81	+1.3
4,732,015	-		DZA65_RS21875	0.81	+0.1
4,732,015	-		DZA65_RS21875	0.81	+0.2
4,732,015	-		DZA65_RS21875	0.81	+0.2
4,732,015	-		DZA65_RS21875	0.81	+0.2
4,732,015	-		DZA65_RS21875	0.81	-0.3
4,732,015	-		DZA65_RS21875	0.81	-0.0
4,732,015	-		DZA65_RS21875	0.81	+0.3
4,732,015	-		DZA65_RS21875	0.81	+0.7
4,732,015	-		DZA65_RS21875	0.81	+0.4
4,732,015	-		DZA65_RS21875	0.81	-0.3
4,732,015	-		DZA65_RS21875	0.81	-1.5
4,732,015	-		DZA65_RS21875	0.81	-0.0
4,732,015	-		DZA65_RS21875	0.81	+0.1
4,732,015	-		DZA65_RS21875	0.81	-0.0
4,732,015	-		DZA65_RS21875	0.81	+1.1
4,732,015	-		DZA65_RS21875	0.81	-1.8
4,732,015	-		DZA65_RS21875	0.81	+1.1
4,732,015	-		DZA65_RS21875	0.81	+1.1
4,732,015	-		DZA65_RS21875	0.81	+0.8
4,732,015	-		DZA65_RS21875	0.81	-0.3
4,732,015	-		DZA65_RS21875	0.81	-0.4
4,732,015	-		DZA65_RS21875	0.81	+0.6
4,732,015	-		DZA65_RS21875	0.81	-1.0
4,732,015	-		DZA65_RS21875	0.81	-0.9
4,732,015	-		DZA65_RS21875	0.81	+0.4
4,732,015	-		DZA65_RS21875	0.81	+0.7
4,732,015	-		DZA65_RS21875	0.81	-0.7
4,732,015	-		DZA65_RS21875	0.81	+1.0
4,732,015	-		DZA65_RS21875	0.81	+0.4
4,732,015	-		DZA65_RS21875	0.81	+0.7
4,732,015	-		DZA65_RS21875	0.81	-0.8
4,732,015	-		DZA65_RS21875	0.81	-0.4
4,732,015	-		DZA65_RS21875	0.81	-0.6
4,732,015	-		DZA65_RS21875	0.81	+0.9
4,732,015	-		DZA65_RS21875	0.81	-0.2
4,732,015	-		DZA65_RS21875	0.81	-1.3
4,732,015	-		DZA65_RS21875	0.81	+0.7
4,732,015	-		DZA65_RS21875	0.81	-2.4
4,732,015	-		DZA65_RS21875	0.81	+1.0
4,732,015	-		DZA65_RS21875	0.81	-0.1
4,732,015	-		DZA65_RS21875	0.81	+0.0
4,732,015	-		DZA65_RS21875	0.81	-0.7
4,732,015	-		DZA65_RS21875	0.81	+1.3
4,732,015	-		DZA65_RS21875	0.81	-0.7
4,732,015	-		DZA65_RS21875	0.81	+0.5
4,732,100	+		DZA65_RS21875	0.85	-0.2
4,732,100	+		DZA65_RS21875	0.85	-2.0
4,732,100	+		DZA65_RS21875	0.85	+0.4
4,732,100	+		DZA65_RS21875	0.85	-0.7
4,732,100	+		DZA65_RS21875	0.85	-0.7
4,732,100	+		DZA65_RS21875	0.85	-0.1
4,732,101	-		DZA65_RS21875	0.85	-0.3
4,732,101	-		DZA65_RS21875	0.85	-0.4
4,732,103	+		DZA65_RS21875	0.85	+2.7
4,732,103	+		DZA65_RS21875	0.85	-0.1
4,732,103	+		DZA65_RS21875	0.85	+0.7
4,732,103	+		DZA65_RS21875	0.85	-0.1
4,732,104	-		DZA65_RS21875	0.85	+0.9
4,732,122	+		DZA65_RS21875	0.86	-1.0
4,732,122	+		DZA65_RS21875	0.86	-0.5
4,732,122	+		DZA65_RS21875	0.86	+0.6
4,732,122	+		DZA65_RS21875	0.86	+1.2
4,732,122	+		DZA65_RS21875	0.86	-2.3
4,732,122	+		DZA65_RS21875	0.86	+2.9
4,732,123	-		DZA65_RS21875	0.86	-0.4
4,732,123	-		DZA65_RS21875	0.86	-1.1
4,732,123	-		DZA65_RS21875	0.86	-1.0
4,732,123	-		DZA65_RS21875	0.86	+0.3
4,732,123	-		DZA65_RS21875	0.86	-0.1
4,732,123	-		DZA65_RS21875	0.86	-0.4
4,732,136	-		DZA65_RS21875	0.87	+0.9
4,732,140	-		DZA65_RS21875	0.87	+0.6
4,732,174	+		DZA65_RS21875	0.89	-2.3
4,732,175	-		DZA65_RS21875	0.89	-0.5
4,732,203	+				-0.0
4,732,205	+				-0.1
4,732,205	+				-0.2
4,732,205	+				-0.5
4,732,205	+				+0.5
4,732,205	+				-0.4
4,732,205	+				-0.3
4,732,205	+				-1.3
4,732,205	+				-0.8
4,732,205	+				+1.5
4,732,205	+				-2.3
4,732,205	+				+0.0
4,732,205	+				+0.1
4,732,206	-				-1.7
4,732,206	-				-1.7
4,732,206	-				-0.9
4,732,206	-				+0.1
4,732,206	-				+0.1
4,732,206	-				-0.3
4,732,206	-				-0.1
4,732,206	-				+1.1
4,732,206	-				-1.9
4,732,206	-				-0.6
4,732,206	-				+0.0
4,732,206	-				+1.0
4,732,206	-				-2.2
4,732,206	-				-1.4
4,732,206	-				+0.3
4,732,206	-				-0.6
4,732,206	-				+0.7
4,732,207	+				+0.3
4,732,207	+				+2.3
4,732,207	+				+0.1
4,732,207	+				+1.0
4,732,207	+				+1.1
4,732,207	+				-0.3
4,732,207	+				+2.5
4,732,207	+				-0.7
4,732,207	+				-0.7
4,732,207	+				-0.5
4,732,207	+				-0.3
4,732,207	+				-0.4
4,732,207	+				+0.1
4,732,208	-				+0.0
4,732,208	-				-0.0
4,732,208	-				+0.8
4,732,208	-				+1.7
4,732,208	-				+0.2
4,732,208	-				-0.0
4,732,208	-				-0.1
4,732,208	-				-0.7
4,732,208	-				-1.5
4,732,208	-				-0.4
4,732,208	-				-1.1
4,732,208	-				-0.5
4,732,208	-				+0.3
4,732,208	-				-0.7
4,732,208	-				-1.1
4,732,208	-				+0.2
4,732,208	-				-0.5
4,732,209	+				-1.3
4,732,245	-				-1.1
4,732,245	-				-1.4
4,732,254	-				-1.4
4,732,313	+				+0.4
4,732,313	+				-0.9
4,732,313	+				-0.8
4,732,313	+				-1.3
4,732,313	+				-0.5
4,732,313	+				+0.7
4,732,313	+				-0.2
4,732,314	-				-0.3
4,732,314	-				+0.3
4,732,314	-				-0.3
4,732,314	-				-1.2
4,732,314	-				-0.2
4,732,314	-				-0.3
4,732,314	-				+0.2
4,732,314	-				+0.1
4,732,315	+				+0.9
4,732,315	+				+0.2
4,732,315	+				+0.2
4,732,315	+				-0.0
4,732,315	+				+0.4
4,732,315	+				-0.7
4,732,315	+				-1.6
4,732,315	+				-2.9
4,732,315	+				+1.7
4,732,315	+				-0.9
4,732,315	+				-0.3
4,732,315	+				+0.4
4,732,315	+				+2.1
4,732,316	-				-0.5
4,732,316	-				-0.1
4,732,316	-				-0.5
4,732,316	-				+0.1
4,732,316	-				-0.3
4,732,316	-				-0.1
4,732,316	-				-0.9
4,732,316	-				-0.3
4,732,316	-				-0.3
4,732,316	-				-0.3
4,732,316	-				+0.2
4,732,316	-				-0.8
4,732,316	-				+0.4
4,732,316	-				-0.3
4,732,316	-				+0.1
4,732,316	-				-0.1
4,732,316	-				-0.7
4,732,316	-				-0.2
4,732,316	-				+0.6
4,732,317	+				-0.6
4,732,318	-				-0.4
4,732,318	-				-1.1
4,732,318	-				-0.4
4,732,373	+				+0.1
4,732,380	-				-2.8
4,732,380	-				-0.1
4,732,389	-				-0.4
4,732,412	+				-1.3
4,732,412	+				-0.3
4,732,412	+				-1.0
4,732,413	-				-2.7
4,732,413	-				+1.0
4,732,414	+				+0.2
4,732,414	+				+0.4
4,732,415	-				+0.1
4,732,415	-				+0.3
4,732,427	-				-0.3
4,732,427	-				-1.8
4,732,503	+				+0.1
4,732,504	-				+0.3
4,732,519	+				+0.4
4,732,519	+				+0.1
4,732,520	-				+1.4
4,732,520	-				+0.3
4,732,540	+				-1.9
4,732,540	+				+0.3
4,732,540	+				-0.1
4,732,540	+				-0.2
4,732,541	-				-0.1
4,732,541	-				+1.3
4,732,707	+				-1.3
4,732,708	-		DZA65_RS21880	0.23	-1.3
4,732,708	-		DZA65_RS21880	0.23	-2.1
4,732,708	-		DZA65_RS21880	0.23	+0.5
4,732,708	-		DZA65_RS21880	0.23	-1.1
4,732,708	-		DZA65_RS21880	0.23	+0.5
4,732,733	+		DZA65_RS21880	0.26	-0.0
4,732,733	+		DZA65_RS21880	0.26	+1.7
4,732,734	-		DZA65_RS21880	0.26	-0.7
4,732,734	-		DZA65_RS21880	0.26	-1.0
4,732,804	+		DZA65_RS21880	0.35	-0.2
4,732,804	+		DZA65_RS21880	0.35	-0.5
4,732,804	+		DZA65_RS21880	0.35	+0.3
4,732,804	+		DZA65_RS21880	0.35	-0.3
4,732,804	+		DZA65_RS21880	0.35	+2.3
4,732,805	-		DZA65_RS21880	0.35	+0.1
4,732,805	-		DZA65_RS21880	0.35	-0.0
4,732,805	-		DZA65_RS21880	0.35	-0.4
4,732,805	-		DZA65_RS21880	0.35	+2.3
4,732,805	-		DZA65_RS21880	0.35	-0.0
4,732,805	-		DZA65_RS21880	0.35	+1.3
4,732,808	-		DZA65_RS21880	0.36	-0.1
4,732,844	+		DZA65_RS21880	0.40	-1.3
4,732,844	+		DZA65_RS21880	0.40	-1.0
4,732,844	+		DZA65_RS21880	0.40	-0.4
4,732,844	+		DZA65_RS21880	0.40	+0.3
4,732,844	+		DZA65_RS21880	0.40	-0.3
4,732,845	-		DZA65_RS21880	0.40	-0.4
4,732,987	+		DZA65_RS21880	0.57	-0.3
4,732,988	-				+0.3
4,733,023	-		DZA65_RS21880	0.62	+1.8
4,733,042	+		DZA65_RS21880	0.64	+0.3
4,733,042	+		DZA65_RS21880	0.64	+1.7
4,733,043	-		DZA65_RS21880	0.64	+0.2
4,733,043	-		DZA65_RS21880	0.64	-0.3
4,733,043	-		DZA65_RS21880	0.64	+0.3
4,733,043	-		DZA65_RS21880	0.64	+0.3
4,733,099	+		DZA65_RS21880	0.71	-0.0
4,733,099	+		DZA65_RS21880	0.71	+0.4
4,733,099	+		DZA65_RS21880	0.71	+0.6
4,733,100	-		DZA65_RS21880	0.71	+0.5
4,733,100	-		DZA65_RS21880	0.71	-0.1
4,733,100	-		DZA65_RS21880	0.71	+3.1
4,733,120	+				+1.0
4,733,161	+		DZA65_RS21880	0.79	+1.3
4,733,161	+		DZA65_RS21880	0.79	+0.1
4,733,161	+		DZA65_RS21880	0.79	-1.4
4,733,162	-		DZA65_RS21880	0.79	+0.3
4,733,162	-		DZA65_RS21880	0.79	-0.5
4,733,162	-		DZA65_RS21880	0.79	-0.9
4,733,263	+				+0.5
4,733,273	+				-0.8
4,733,274	-				-0.7
4,733,325	+				-1.4
4,733,325	+				+0.0
4,733,326	-				-0.1
4,733,326	-				+0.3
4,733,333	+				+0.8
4,733,333	+				-2.1
4,733,334	-				-0.3
4,733,414	+		DZA65_RS21885	0.15	+0.3
4,733,414	+		DZA65_RS21885	0.15	+0.0
4,733,414	+		DZA65_RS21885	0.15	+0.5
4,733,415	-		DZA65_RS21885	0.15	-0.9
4,733,662	+		DZA65_RS21885	0.56	-1.2
4,733,662	+		DZA65_RS21885	0.56	+1.1
4,733,662	+		DZA65_RS21885	0.56	+0.1
4,733,662	+		DZA65_RS21885	0.56	-1.3
4,733,662	+		DZA65_RS21885	0.56	+0.1
4,733,662	+		DZA65_RS21885	0.56	+0.3
4,733,662	+		DZA65_RS21885	0.56	-0.4
4,733,662	+		DZA65_RS21885	0.56	+1.1
4,733,662	+		DZA65_RS21885	0.56	-0.1
4,733,662	+		DZA65_RS21885	0.56	+0.1
4,733,663	-		DZA65_RS21885	0.56	-0.5
4,733,663	-		DZA65_RS21885	0.56	+0.2
4,733,663	-		DZA65_RS21885	0.56	+0.4
4,733,663	-		DZA65_RS21885	0.56	+0.3
4,733,663	-		DZA65_RS21885	0.56	+1.0
4,733,663	-		DZA65_RS21885	0.56	-0.9
4,733,663	-		DZA65_RS21885	0.56	-0.1
4,733,663	-		DZA65_RS21885	0.56	-0.5
4,733,663	-		DZA65_RS21885	0.56	+0.7
4,733,663	-		DZA65_RS21885	0.56	+0.4
4,733,663	-		DZA65_RS21885	0.56	+1.3
4,733,812	+		DZA65_RS21885	0.81	-0.7
4,733,812	+		DZA65_RS21885	0.81	-0.2
4,733,812	+		DZA65_RS21885	0.81	-1.8
4,733,812	+		DZA65_RS21885	0.81	+2.1
4,733,812	+		DZA65_RS21885	0.81	+0.3
4,733,812	+		DZA65_RS21885	0.81	-0.4
4,733,813	-		DZA65_RS21885	0.81	-1.3
4,733,813	-		DZA65_RS21885	0.81	+1.5
4,733,843	+		DZA65_RS21885	0.86	-0.0
4,733,858	-		DZA65_RS21885	0.89	+1.7
4,733,870	-				-0.8
4,733,880	-				-0.5
4,733,928	+				-1.1
4,733,929	-				-1.5
4,733,929	-				+1.2
4,733,929	-				-0.3
4,733,929	-				-0.2
4,733,962	+				-0.8
4,733,962	+				+0.1
4,733,963	-				+0.5
4,733,963	-				-1.3
4,733,963	-				-0.5
4,733,964	+				-0.3
4,733,964	+				-0.7
4,733,965	-				-1.1
4,733,965	-				-0.7
4,734,010	-				-0.3
4,734,011	+				+0.5
4,734,017	+				+0.1
4,734,018	-				-0.3
4,734,018	-				+0.2
4,734,018	-				-0.4
4,734,038	-				+0.3
4,734,058	+				-0.5
4,734,058	+				+0.5
4,734,070	-				+1.6
4,734,103	+				-0.4
4,734,104	-				+0.2
4,734,131	+				+0.7
4,734,131	+				+0.1
4,734,131	+				+0.7
4,734,132	-				-2.0
4,734,136	-				+0.7
4,734,139	+				-0.2
4,734,140	-				+0.4
4,734,140	-				+0.8
4,734,140	-				-0.3
4,734,140	-				+0.2
4,734,145	-				+0.6
4,734,150	+				+1.1
4,734,174	+				+0.3
4,734,187	+				+0.1
4,734,187	+				+0.2
4,734,187	+				-0.4
4,734,188	-				-0.3
4,734,191	+				-2.0
4,734,191	+				-0.2
4,734,192	-				-0.1
4,734,192	-				+0.6
4,734,192	-				+0.6
4,734,207	+				-1.0
4,734,207	+				-0.1
4,734,207	+				+1.7
4,734,207	+				+0.3
4,734,207	+				-0.1
4,734,207	+				-0.3
4,734,208	-				-1.1
4,734,208	-				+0.7
4,734,208	-				-0.3
4,734,213	-				-1.0
4,734,213	-				+0.4
4,734,237	-				+1.3
4,734,237	-				+0.5
4,734,256	-				+0.7
4,734,265	+				-1.0
4,734,270	-				+0.5
4,734,279	-				-0.4
4,734,297	+				-0.1
4,734,297	+				-0.4
4,734,297	+				-0.1
4,734,297	+				-0.4
4,734,298	-				+0.8
4,734,298	-				+0.6
4,734,298	-				+0.9