Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18155

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
3,909,862	-		DZA65_RS18150	0.41	-0.1
3,909,890	+		DZA65_RS18150	0.43	+0.6
3,909,964	+		DZA65_RS18150	0.48	+1.1
3,910,204	+		DZA65_RS18150	0.66	+0.4
3,910,226	+		DZA65_RS18150	0.68	-0.7
3,910,226	+		DZA65_RS18150	0.68	-1.7
3,910,226	+		DZA65_RS18150	0.68	-0.4
3,910,226	+		DZA65_RS18150	0.68	+0.6
3,910,226	+		DZA65_RS18150	0.68	-0.2
3,910,226	+		DZA65_RS18150	0.68	+0.2
3,910,226	+		DZA65_RS18150	0.68	+1.6
3,910,226	+		DZA65_RS18150	0.68	-0.1
3,910,227	-		DZA65_RS18150	0.68	+0.7
3,910,227	-		DZA65_RS18150	0.68	+0.3
3,910,229	+		DZA65_RS18150	0.68	+0.7
3,910,229	+		DZA65_RS18150	0.68	+0.9
3,910,229	+		DZA65_RS18150	0.68	-1.3
3,910,229	+		DZA65_RS18150	0.68	-0.9
3,910,229	+		DZA65_RS18150	0.68	-0.2
3,910,229	+		DZA65_RS18150	0.68	-1.4
3,910,229	+		DZA65_RS18150	0.68	-0.1
3,910,229	+		DZA65_RS18150	0.68	-1.4
3,910,229	+		DZA65_RS18150	0.68	+0.9
3,910,229	+		DZA65_RS18150	0.68	-0.7
3,910,229	+		DZA65_RS18150	0.68	-1.0
3,910,230	-		DZA65_RS18150	0.68	+1.1
3,910,231	+		DZA65_RS18150	0.68	-0.6
3,910,231	+		DZA65_RS18150	0.68	-0.3
3,910,231	+		DZA65_RS18150	0.68	+0.2
3,910,231	+		DZA65_RS18150	0.68	+0.6
3,910,232	-		DZA65_RS18150	0.68	+0.4
3,910,232	-		DZA65_RS18150	0.68	-0.1
3,910,232	-		DZA65_RS18150	0.68	+0.3
3,910,232	-		DZA65_RS18150	0.68	+0.1
3,910,262	+		DZA65_RS18150	0.71	-2.2
3,910,262	+		DZA65_RS18150	0.71	-0.9
3,910,262	+		DZA65_RS18150	0.71	-1.6
3,910,263	-		DZA65_RS18150	0.71	-1.6
3,910,534	-				+0.8
3,910,640	+				-0.2
3,910,640	+				+0.1
3,910,641	-				-0.6
3,910,641	-				+1.1
3,910,653	+				-0.4
3,910,653	+				-0.4
3,910,653	+				-0.7
3,910,653	+				-0.1
3,910,653	+				-0.2
3,910,673	+				-0.6
3,910,673	+				-0.7
3,910,673	+				-1.2
3,910,673	+				-1.2
3,910,673	+				-0.9
3,910,674	-				+0.6
3,910,674	-				-0.6
3,910,681	+				-1.4
3,910,691	+				-1.9
3,910,691	+				-1.7
3,910,691	+				-1.4
3,910,691	+				+0.3
3,910,691	+				-0.4
3,910,691	+				+0.3
3,910,692	-				+1.9
3,910,692	-				+0.1
3,910,723	+				+1.2
3,910,723	+				-0.3
3,910,723	+				+0.3
3,910,723	+				-1.7
3,910,724	-				-0.2
3,910,724	-				+0.4
3,910,724	-				-1.2
3,910,740	+				-0.3
3,910,740	+				+0.3
3,910,740	+				-0.8
3,910,740	+				+0.8
3,910,740	+				+0.9
3,910,740	+				+0.8
3,910,740	+				-0.4
3,910,740	+				-0.1
3,910,740	+				+0.3
3,910,740	+				+0.4
3,910,740	+				+0.6
3,910,740	+				+0.7
3,910,740	+				+1.8
3,910,740	+				+0.3
3,910,740	+				-0.9
3,910,741	-				+0.2
3,910,741	-				+0.6
3,910,741	-				+0.5
3,910,741	-				+1.1
3,910,741	-				+1.0
3,910,792	-				+1.1
3,910,813	+				+1.3
3,910,813	+				-0.4
3,910,815	+				-0.9
3,910,815	+				-0.0
3,910,816	-				-0.9
3,910,854	+				+0.2
3,910,854	+				-1.6
3,910,855	-				-0.1
3,910,885	+				+0.7
3,910,885	+				+0.5
3,910,885	+				-0.2
3,910,886	-				+0.7
3,910,886	-				+1.1
3,910,932	+				-0.1
3,910,932	+				+0.4
3,910,932	+				-0.2
3,910,932	+				-0.4
3,910,932	+				+0.4
3,910,932	+				+1.3
3,910,932	+				+1.0
3,910,932	+				-0.9
3,910,932	+				+1.5
3,910,932	+				-0.6
3,910,932	+				+0.1
3,910,932	+				-0.7
3,910,932	+				+0.1
3,910,933	-				+0.2
3,910,933	-				+1.0
3,911,148	+		DZA65_RS18155	0.16	-0.3
3,911,149	-		DZA65_RS18155	0.16	+0.7
3,911,179	+		DZA65_RS18155	0.17	+0.3
3,911,179	+		DZA65_RS18155	0.17	+0.7
3,911,180	-		DZA65_RS18155	0.17	+0.8
3,911,180	-		DZA65_RS18155	0.17	+0.6
3,911,180	-		DZA65_RS18155	0.17	+0.4
3,911,491	+		DZA65_RS18155	0.28	-0.9
3,911,491	+		DZA65_RS18155	0.28	+1.3
3,911,491	+		DZA65_RS18155	0.28	+1.9
3,911,491	+		DZA65_RS18155	0.28	-1.4
3,911,491	+		DZA65_RS18155	0.28	-0.2
3,911,492	-		DZA65_RS18155	0.28	+1.0
3,911,492	-		DZA65_RS18155	0.28	+0.7
3,911,492	-		DZA65_RS18155	0.28	+0.5
3,911,492	-		DZA65_RS18155	0.28	+0.4
3,911,492	-		DZA65_RS18155	0.28	-0.2
3,911,492	-		DZA65_RS18155	0.28	+0.1
3,911,492	-		DZA65_RS18155	0.28	+0.8
3,911,492	-		DZA65_RS18155	0.28	-1.4
3,911,492	-		DZA65_RS18155	0.28	+0.6
3,911,492	-		DZA65_RS18155	0.28	+0.9
3,911,492	-		DZA65_RS18155	0.28	+0.1
3,911,492	-		DZA65_RS18155	0.28	-0.0
3,911,492	-		DZA65_RS18155	0.28	+0.2
3,911,692	+		DZA65_RS18155	0.35	+0.3
3,911,692	+		DZA65_RS18155	0.35	-0.9
3,911,693	-		DZA65_RS18155	0.35	+0.6
3,911,693	-		DZA65_RS18155	0.35	+1.0
3,911,733	+		DZA65_RS18155	0.37	+0.3
3,911,733	+		DZA65_RS18155	0.37	-0.7
3,911,832	+		DZA65_RS18155	0.40	+1.1
3,911,832	+		DZA65_RS18155	0.40	-0.3
3,911,832	+		DZA65_RS18155	0.40	+0.6
3,911,832	+		DZA65_RS18155	0.40	-0.6
3,911,833	-		DZA65_RS18155	0.40	-0.2
3,911,833	-		DZA65_RS18155	0.40	+0.3
3,911,848	-		DZA65_RS18155	0.41	-0.1
3,912,246	+		DZA65_RS18155	0.55	-1.0
3,912,290	-		DZA65_RS18155	0.57	+0.7
3,912,305	+		DZA65_RS18155	0.58	-0.1
3,912,305	+		DZA65_RS18155	0.58	+0.3
3,912,306	-		DZA65_RS18155	0.58	+0.3
3,912,325	+		DZA65_RS18155	0.58	+0.1
3,912,325	+		DZA65_RS18155	0.58	+0.0
3,912,325	+		DZA65_RS18155	0.58	+0.3
3,912,326	-		DZA65_RS18155	0.58	+1.0
3,912,326	-		DZA65_RS18155	0.58	-0.6
3,912,326	-		DZA65_RS18155	0.58	+1.4
3,912,378	+		DZA65_RS18155	0.60	+2.8
3,912,379	-		DZA65_RS18155	0.60	-1.3
3,912,379	-		DZA65_RS18155	0.60	+0.1
3,912,397	+		DZA65_RS18155	0.61	+0.2
3,912,398	-		DZA65_RS18155	0.61	+0.9
3,912,456	-		DZA65_RS18155	0.63	-1.2
3,912,466	+		DZA65_RS18155	0.63	+0.5
3,912,474	+		DZA65_RS18155	0.64	-0.1
3,912,474	+		DZA65_RS18155	0.64	-0.2
3,912,475	-		DZA65_RS18155	0.64	-0.4
3,912,648	+		DZA65_RS18155	0.70	+1.3
3,912,859	-		DZA65_RS18155	0.78	+0.3
3,912,915	+		DZA65_RS18155	0.80	+0.9
3,912,942	+		DZA65_RS18155	0.81	+1.1
3,912,942	+		DZA65_RS18155	0.81	+0.8
3,912,942	+		DZA65_RS18155	0.81	+1.4
3,912,943	-		DZA65_RS18155	0.81	-0.1
3,912,943	-		DZA65_RS18155	0.81	-2.8
3,913,018	+		DZA65_RS18155	0.83	+1.9
3,913,018	+		DZA65_RS18155	0.83	-0.6
3,913,018	+		DZA65_RS18155	0.83	+0.6
3,913,018	+		DZA65_RS18155	0.83	+0.9
3,913,018	+		DZA65_RS18155	0.83	-0.2
3,913,018	+		DZA65_RS18155	0.83	-0.8
3,913,019	-		DZA65_RS18155	0.83	+0.6
3,913,019	-		DZA65_RS18155	0.83	+0.9
3,913,019	-		DZA65_RS18155	0.83	-1.2
3,913,019	-		DZA65_RS18155	0.83	-0.2
3,913,019	-		DZA65_RS18155	0.83	+0.2
3,913,077	+		DZA65_RS18155	0.85	-0.0
3,913,077	+		DZA65_RS18155	0.85	+0.2
3,913,077	+		DZA65_RS18155	0.85	+0.7
3,913,077	+		DZA65_RS18155	0.85	+1.2
3,913,077	+		DZA65_RS18155	0.85	+0.4
3,913,077	+		DZA65_RS18155	0.85	+1.3
3,913,078	-		DZA65_RS18155	0.85	+0.3
3,913,078	-		DZA65_RS18155	0.85	+0.9
3,913,078	-		DZA65_RS18155	0.85	-2.0
3,913,177	-		DZA65_RS18155	0.89	+1.6
3,913,206	+				+1.0
3,913,206	+				-1.0
3,913,207	-				-0.5
3,913,207	-				+0.4
3,913,207	-				+0.4
3,913,207	-				+0.4
3,913,244	+				-0.1
3,913,245	-				-0.8
3,913,278	+				-2.3
3,913,279	-				+0.9
3,913,279	-				-0.8
3,913,318	+				-0.9
3,913,318	+				+0.3
3,913,318	+				+1.0
3,913,318	+				+0.4
3,913,318	+				-0.1
3,913,318	+				-1.7
3,913,318	+				-0.3
3,913,319	-				+0.6
3,913,319	-				-0.9
3,913,319	-				-1.0
3,913,319	-				+0.3
3,913,319	-				+1.1
3,913,319	-				+0.1
3,913,320	+				+0.3
3,913,355	-				+0.1
3,913,374	+				-0.7
3,913,439	+				-0.6
3,913,439	+				-0.0
3,913,439	+				+0.7
3,913,439	+				+0.0
3,913,439	+				+0.7
3,913,440	-				-1.0
3,913,440	-				-0.2
3,913,552	+				-0.7
3,914,342	+		DZA65_RS18160	0.66	-1.4
3,914,343	-		DZA65_RS18160	0.66	-1.1
3,914,396	-		DZA65_RS18160	0.71	-1.2