Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09635

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
2,026,083	+				+0.1
2,026,083	+				-0.7
2,026,083	+				+0.6
2,026,084	-				+0.8
2,026,137	+				+0.5
2,026,137	+				+0.4
2,026,137	+				-1.2
2,026,137	+				-0.2
2,026,138	-				-1.2
2,026,138	-				-0.1
2,026,138	-				+0.6
2,026,138	-				+1.4
2,026,140	+				-0.2
2,026,141	-				-3.4
2,026,250	-		DZA65_RS09630	0.18	-1.1
2,026,251	+		DZA65_RS09630	0.18	-1.5
2,026,251	+		DZA65_RS09630	0.18	+0.8
2,026,251	+		DZA65_RS09630	0.18	-1.0
2,026,251	+		DZA65_RS09630	0.18	-0.3
2,026,251	+		DZA65_RS09630	0.18	+0.1
2,026,252	-		DZA65_RS09630	0.19	+0.2
2,026,252	-		DZA65_RS09630	0.19	+0.3
2,026,252	-		DZA65_RS09630	0.19	-1.4
2,026,278	+		DZA65_RS09630	0.21	-0.1
2,026,365	+		DZA65_RS09630	0.30	-0.4
2,026,366	-		DZA65_RS09630	0.30	-1.0
2,026,437	+		DZA65_RS09630	0.37	+0.5
2,026,437	+		DZA65_RS09630	0.37	-1.5
2,026,437	+		DZA65_RS09630	0.37	+0.5
2,026,437	+		DZA65_RS09630	0.37	+0.2
2,026,437	+		DZA65_RS09630	0.37	-0.2
2,026,437	+		DZA65_RS09630	0.37	-0.2
2,026,437	+		DZA65_RS09630	0.37	-0.4
2,026,438	-		DZA65_RS09630	0.37	-2.4
2,026,468	+		DZA65_RS09630	0.40	+1.9
2,026,468	+		DZA65_RS09630	0.40	+0.8
2,026,468	+		DZA65_RS09630	0.40	+0.2
2,026,468	+		DZA65_RS09630	0.40	-0.2
2,026,468	+		DZA65_RS09630	0.40	-0.4
2,026,468	+		DZA65_RS09630	0.40	+0.0
2,026,468	+		DZA65_RS09630	0.40	+1.3
2,026,468	+		DZA65_RS09630	0.40	+1.6
2,026,469	-		DZA65_RS09630	0.40	-1.6
2,026,469	-		DZA65_RS09630	0.40	+0.5
2,026,469	-		DZA65_RS09630	0.40	+0.1
2,026,469	-		DZA65_RS09630	0.40	+0.4
2,026,469	-		DZA65_RS09630	0.40	-0.5
2,026,469	-		DZA65_RS09630	0.40	-0.2
2,026,469	-		DZA65_RS09630	0.40	+0.8
2,026,470	+		DZA65_RS09630	0.40	-0.3
2,026,470	+		DZA65_RS09630	0.40	-0.2
2,026,470	+		DZA65_RS09630	0.40	-1.5
2,026,470	+		DZA65_RS09630	0.40	-0.3
2,026,470	+		DZA65_RS09630	0.40	-0.8
2,026,470	+		DZA65_RS09630	0.40	+0.8
2,026,470	+		DZA65_RS09630	0.40	+0.3
2,026,470	+		DZA65_RS09630	0.40	-0.1
2,026,470	+		DZA65_RS09630	0.40	-0.3
2,026,470	+		DZA65_RS09630	0.40	-0.7
2,026,470	+		DZA65_RS09630	0.40	-1.0
2,026,470	+		DZA65_RS09630	0.40	-1.0
2,026,470	+		DZA65_RS09630	0.40	+0.2
2,026,470	+		DZA65_RS09630	0.40	+0.3
2,026,471	-		DZA65_RS09630	0.41	-0.6
2,026,471	-		DZA65_RS09630	0.41	-0.4
2,026,471	-		DZA65_RS09630	0.41	-1.1
2,026,471	-		DZA65_RS09630	0.41	-0.2
2,026,471	-		DZA65_RS09630	0.41	+0.8
2,026,471	-		DZA65_RS09630	0.41	+0.2
2,026,471	-		DZA65_RS09630	0.41	-0.5
2,026,471	-		DZA65_RS09630	0.41	+0.1
2,026,471	-		DZA65_RS09630	0.41	+1.0
2,026,471	-		DZA65_RS09630	0.41	-0.4
2,026,471	-		DZA65_RS09630	0.41	-0.1
2,026,471	-		DZA65_RS09630	0.41	+1.0
2,026,471	-		DZA65_RS09630	0.41	-0.6
2,026,471	-		DZA65_RS09630	0.41	-0.1
2,026,471	-		DZA65_RS09630	0.41	+0.4
2,026,588	+		DZA65_RS09630	0.52	+0.1
2,026,588	+		DZA65_RS09630	0.52	-0.7
2,026,588	+		DZA65_RS09630	0.52	-0.9
2,026,588	+		DZA65_RS09630	0.52	-0.6
2,026,589	-		DZA65_RS09630	0.52	+0.5
2,026,589	-		DZA65_RS09630	0.52	-1.1
2,026,589	-		DZA65_RS09630	0.52	+0.5
2,026,589	-		DZA65_RS09630	0.52	-1.3
2,026,611	+		DZA65_RS09630	0.55	-0.6
2,026,611	+		DZA65_RS09630	0.55	-1.2
2,026,611	+		DZA65_RS09630	0.55	-0.3
2,026,612	-		DZA65_RS09630	0.55	+0.5
2,026,617	+		DZA65_RS09630	0.55	+0.9
2,026,617	+		DZA65_RS09630	0.55	-0.5
2,026,617	+		DZA65_RS09630	0.55	-0.6
2,026,617	+		DZA65_RS09630	0.55	-0.7
2,026,617	+		DZA65_RS09630	0.55	-1.5
2,026,618	-		DZA65_RS09630	0.55	-1.0
2,026,618	-		DZA65_RS09630	0.55	+0.3
2,026,618	-		DZA65_RS09630	0.55	-0.3
2,026,618	-		DZA65_RS09630	0.55	-0.7
2,026,618	-		DZA65_RS09630	0.55	+0.1
2,026,688	+				-0.2
2,026,689	-		DZA65_RS09630	0.62	+1.2
2,026,709	+		DZA65_RS09630	0.64	+0.6
2,026,710	-		DZA65_RS09630	0.65	+0.6
2,026,998	+				+0.1
2,026,998	+				+0.3
2,026,998	+				-1.8
2,026,998	+				+0.1
2,026,999	-				+0.4
2,026,999	-				-0.1
2,027,084	+				-0.9
2,027,089	+				-0.0
2,027,089	+				-1.5
2,027,089	+				-0.7
2,027,090	-				-1.7
2,027,090	-				-0.2
2,027,090	-				-1.2
2,027,090	-				-0.1
2,027,137	-				-1.0
2,027,204	+				+1.8
2,027,204	+				-0.0
2,027,204	+				+0.1
2,027,204	+				+0.6
2,027,204	+				+0.3
2,027,204	+				-1.9
2,027,205	-				-0.4
2,027,205	-				+0.2
2,027,205	-				+1.2
2,027,247	+		DZA65_RS09635	0.12	-0.2
2,027,248	-		DZA65_RS09635	0.12	+0.5
2,027,248	-		DZA65_RS09635	0.12	-0.2
2,027,311	+		DZA65_RS09635	0.17	-1.8
2,027,311	+		DZA65_RS09635	0.17	-0.8
2,027,312	-		DZA65_RS09635	0.17	-0.6
2,027,320	-		DZA65_RS09635	0.17	+0.4
2,027,524	-		DZA65_RS09635	0.31	+0.3
2,027,575	+		DZA65_RS09635	0.34	-0.7
2,027,595	+		DZA65_RS09635	0.35	-0.1
2,027,665	-		DZA65_RS09635	0.40	-0.5
2,027,739	+		DZA65_RS09635	0.45	-2.2
2,027,739	+		DZA65_RS09635	0.45	-1.2
2,027,739	+		DZA65_RS09635	0.45	-0.2
2,027,740	-		DZA65_RS09635	0.45	-0.6
2,027,740	-		DZA65_RS09635	0.45	+0.5
2,027,740	-		DZA65_RS09635	0.45	+0.2
2,027,773	+		DZA65_RS09635	0.47	-0.8
2,027,773	+		DZA65_RS09635	0.47	+0.6
2,027,774	-		DZA65_RS09635	0.47	-0.2
2,027,823	+		DZA65_RS09635	0.51	+0.9
2,027,824	-		DZA65_RS09635	0.51	+0.4
2,028,220	+		DZA65_RS09635	0.77	+0.2
2,028,220	+		DZA65_RS09635	0.77	+0.5
2,028,220	+		DZA65_RS09635	0.77	-0.6
2,028,221	-		DZA65_RS09635	0.77	+0.2
2,028,221	-		DZA65_RS09635	0.77	-1.2
2,028,221	-		DZA65_RS09635	0.77	+0.8
2,028,221	-		DZA65_RS09635	0.77	-0.2
2,028,255	+		DZA65_RS09635	0.79	+0.0
2,028,255	+		DZA65_RS09635	0.79	+0.3
2,028,256	-		DZA65_RS09635	0.79	+0.4
2,028,318	+		DZA65_RS09635	0.83	+0.1
2,028,352	+		DZA65_RS09635	0.86	+0.1
2,028,378	+		DZA65_RS09635	0.87	+0.9
2,028,398	+		DZA65_RS09635	0.89	+0.6
2,028,399	-		DZA65_RS09635	0.89	-0.5
2,028,399	-		DZA65_RS09635	0.89	+0.0
2,028,422	-				-0.1
2,028,465	+				+0.8
2,028,465	+				+0.3
2,028,465	+				+0.4
2,028,466	-				+0.2
2,028,562	+				-0.5
2,028,570	+				-0.5
2,028,591	+				-1.4
2,028,592	-				+0.2
2,028,635	+				-0.4
2,028,636	-				+0.2
2,028,697	+				+0.2
2,028,698	-				+0.4
2,028,702	+				+1.0
2,028,718	+				+0.6
2,028,718	+				+0.0
2,028,719	-				-0.6
2,028,719	-				-0.3
2,028,740	+				-0.2
2,028,740	+				+0.8
2,028,740	+				+0.3
2,028,741	-				-0.2
2,028,744	+				+0.8
2,028,744	+				+0.0
2,028,744	+				+0.2
2,028,745	-				-0.3
2,028,745	-				+1.4
2,028,745	-				+0.4
2,028,745	-				+0.2
2,028,745	-				-0.8
2,028,745	-				-0.6
2,028,798	-				-1.2
2,028,802	+				-1.3
2,028,802	+				-0.2
2,028,802	+				+0.2
2,028,802	+				-0.6
2,028,802	+				+0.1
2,028,802	+				-0.9
2,028,802	+				+0.0
2,028,802	+				+0.1
2,028,802	+				+0.8
2,028,802	+				-1.7
2,028,803	-				+0.5
2,028,803	-				-0.3
2,028,803	-				+0.5
2,028,803	-				+0.1
2,028,803	-				-0.0
2,028,803	-				+0.3
2,028,803	-				+1.5
2,028,803	-				-2.2
2,028,803	-				-0.9
2,028,803	-				-0.1
2,028,804	+				+0.4
2,028,804	+				+0.3
2,028,804	+				+1.3
2,028,805	-				-0.6
2,028,805	-				+0.0
2,028,805	-				-0.7
2,028,805	-				-1.3
2,028,805	-				+1.2
2,028,805	-				-0.5
2,028,805	-				-1.8
2,028,806	+				+0.6
2,028,807	-				-0.8
2,028,807	-				+0.3
2,028,807	-				-0.1
2,028,811	+				-0.1
2,028,816	-				+0.3
2,028,816	-				-0.2
2,028,830	+				+0.2
2,028,831	-				-0.7
2,028,831	-				-1.1
2,028,918	+				-0.3
2,028,918	+				-0.3
2,028,919	-				+0.6
2,028,929	+				+0.3
2,028,929	+				+0.1
2,028,930	-				-0.2
2,028,963	+				+0.5
2,028,963	+				-0.8
2,028,963	+				+0.6
2,028,964	-				+0.4
2,028,964	-				-0.1
2,028,964	-				-0.7
2,029,042	+				-1.8
2,029,076	+		DZA65_RS09640	0.11	+0.4
2,029,354	+		DZA65_RS09640	0.36	+0.3
2,029,355	-				+1.8
2,029,355	-		DZA65_RS09640	0.36	+0.4
2,029,428	+		DZA65_RS09640	0.43	-0.5
2,029,428	+		DZA65_RS09640	0.43	+1.5
2,029,428	+		DZA65_RS09640	0.43	-0.2
2,029,429	-		DZA65_RS09640	0.43	-0.4
2,029,453	+		DZA65_RS09640	0.45	-1.1
2,029,454	-		DZA65_RS09640	0.46	-0.6
2,029,454	-		DZA65_RS09640	0.46	-0.1
2,029,454	-		DZA65_RS09640	0.46	-1.8
2,029,454	-				-0.6
2,029,492	+		DZA65_RS09640	0.49	+0.8
2,029,492	+		DZA65_RS09640	0.49	-0.1
2,029,493	-		DZA65_RS09640	0.49	-0.4
2,029,508	+		DZA65_RS09640	0.51	+0.6
2,029,509	-		DZA65_RS09640	0.51	-1.3