Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08525

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
1,797,652	+				-0.6
1,797,652	+				-0.5
1,797,652	+				-0.1
1,797,652	+				-1.2
1,797,652	+				-0.1
1,797,652	+				+1.2
1,797,653	-				+0.2
1,797,653	-				-0.3
1,797,653	-				+0.2
1,797,653	-				+1.1
1,797,653	-				-0.6
1,797,656	+				+0.8
1,797,656	+				+0.3
1,797,656	+				-0.4
1,797,656	+				-1.6
1,797,656	+				-0.9
1,797,656	+				+0.6
1,797,656	+				+0.3
1,797,656	+				-0.3
1,797,656	+				-0.2
1,797,656	+				+0.4
1,797,656	+				-0.2
1,797,656	+				+0.8
1,797,657	-				-1.7
1,797,657	-				-0.8
1,797,657	-				-0.2
1,797,657	-				-0.9
1,797,657	-				-0.2
1,797,657	-				+0.5
1,797,657	-				-0.3
1,797,657	-				-1.2
1,797,657	-				-1.8
1,797,675	+				-0.8
1,797,730	+				+0.0
1,797,731	-				+0.4
1,797,768	-				-0.7
1,798,372	-				+0.0
1,798,372	-				+1.3
1,798,376	-				-0.5
1,798,386	+				+0.4
1,798,386	+				-1.2
1,798,386	+				-0.8
1,798,387	-				-0.7
1,798,387	-				+1.2
1,798,387	-				-0.4
1,798,387	-				-0.8
1,798,387	-				-0.2
1,798,390	-				+0.0
1,798,390	-				-0.8
1,798,467	+				+1.0
1,798,467	+				+0.2
1,798,468	-				-1.1
1,798,468	-				-0.1
1,798,468	-				-0.5
1,798,468	-				+0.6
1,798,468	-				-2.0
1,798,468	-				+0.6
1,798,473	+				-1.2
1,798,473	+				-1.4
1,798,473	+				+1.4
1,798,474	-				-0.3
1,798,474	-				-0.3
1,798,485	+				-2.0
1,798,485	+				+0.6
1,798,485	+				+0.1
1,798,485	+				-0.2
1,798,486	-				-0.8
1,798,486	-				-1.0
1,798,486	-				-0.0
1,798,486	-				-0.4
1,798,486	-				-0.1
1,798,486	-				+0.4
1,798,486	-				+0.2
1,798,486	-				+0.8
1,798,487	+				+0.5
1,798,487	+				-0.3
1,798,487	+				+0.8
1,798,487	+				-0.6
1,798,488	-				-0.5
1,798,488	-				+0.2
1,798,488	-				-1.1
1,798,488	-				-0.0
1,798,488	-				-0.6
1,798,488	-				-0.8
1,798,488	-				+0.8
1,798,492	+				+0.0
1,798,492	+				-1.2
1,798,493	-				-2.7
1,798,493	-				-0.6
1,798,493	-				+0.3
1,798,493	-				-0.2
1,798,493	-				-0.2
1,798,496	+				+0.3
1,798,496	+				-0.5
1,798,496	+				-0.8
1,798,496	+				-0.3
1,798,497	-				-0.3
1,798,497	-				+0.2
1,798,497	-				-2.8
1,798,497	-				+0.1
1,798,497	-				-0.1
1,798,497	-				-0.9
1,798,497	-				-1.0
1,798,509	-				+0.4
1,798,531	+				+0.1
1,798,531	+				-0.9
1,798,561	-				-1.8
1,798,574	+				-1.4
1,798,574	+				-0.0
1,798,575	-				-0.2
1,798,593	+				+0.5
1,798,593	+				-0.0
1,798,649	+		DZA65_RS08525	0.11	+1.8
1,798,649	+		DZA65_RS08525	0.11	+0.3
1,798,802	+		DZA65_RS08525	0.21	-0.5
1,798,802	+		DZA65_RS08525	0.21	-1.2
1,798,803	-		DZA65_RS08525	0.21	-0.2
1,798,803	-		DZA65_RS08525	0.21	+0.0
1,798,803	-		DZA65_RS08525	0.21	-0.8
1,798,858	+		DZA65_RS08525	0.25	-1.2
1,798,858	+				+1.2
1,798,858	+		DZA65_RS08525	0.25	+2.2
1,798,859	-		DZA65_RS08525	0.25	-0.8
1,798,859	-		DZA65_RS08525	0.25	-2.6
1,798,900	-		DZA65_RS08525	0.28	-0.1
1,798,900	-		DZA65_RS08525	0.28	+0.9
1,798,900	-		DZA65_RS08525	0.28	+0.1
1,799,046	+		DZA65_RS08525	0.38	+0.8
1,799,046	+		DZA65_RS08525	0.38	+0.1
1,799,046	+		DZA65_RS08525	0.38	-0.6
1,799,046	+		DZA65_RS08525	0.38	+0.8
1,799,046	+		DZA65_RS08525	0.38	+2.1
1,799,046	+		DZA65_RS08525	0.38	+1.4
1,799,046	+		DZA65_RS08525	0.38	-0.2
1,799,046	+		DZA65_RS08525	0.38	+0.8
1,799,046	+		DZA65_RS08525	0.38	-0.1
1,799,046	+		DZA65_RS08525	0.38	+0.8
1,799,047	-		DZA65_RS08525	0.38	-0.4
1,799,047	-		DZA65_RS08525	0.38	-0.6
1,799,047	-		DZA65_RS08525	0.38	+0.8
1,799,047	-		DZA65_RS08525	0.38	-0.2
1,799,139	+		DZA65_RS08525	0.44	-0.3
1,799,140	-		DZA65_RS08525	0.44	+0.3
1,799,140	-		DZA65_RS08525	0.44	-1.0
1,799,140	-		DZA65_RS08525	0.44	+0.6
1,799,171	-		DZA65_RS08525	0.46	-0.8
1,799,222	-		DZA65_RS08525	0.50	+1.4
1,799,222	-		DZA65_RS08525	0.50	+0.4
1,799,222	-		DZA65_RS08525	0.50	-1.0
1,799,296	+		DZA65_RS08525	0.55	-1.6
1,799,423	+		DZA65_RS08525	0.63	-0.8
1,799,423	+		DZA65_RS08525	0.63	-0.3
1,799,424	-		DZA65_RS08525	0.63	-0.8
1,799,424	-		DZA65_RS08525	0.63	+0.1
1,799,445	+		DZA65_RS08525	0.65	-1.1
1,799,445	+		DZA65_RS08525	0.65	-0.2
1,799,445	+		DZA65_RS08525	0.65	-0.3
1,799,445	+		DZA65_RS08525	0.65	+0.5
1,799,445	+		DZA65_RS08525	0.65	+0.7
1,799,446	-		DZA65_RS08525	0.65	-0.8
1,799,446	-		DZA65_RS08525	0.65	-1.0
1,799,446	-		DZA65_RS08525	0.65	-0.6
1,799,635	-		DZA65_RS08525	0.78	-1.0
1,799,635	-		DZA65_RS08525	0.78	-0.3
1,799,636	+		DZA65_RS08525	0.78	+0.2
1,799,636	+		DZA65_RS08525	0.78	+0.6
1,799,637	-		DZA65_RS08525	0.78	-0.5
1,799,637	-		DZA65_RS08525	0.78	-0.2
1,799,647	+		DZA65_RS08525	0.78	-0.4
1,799,650	+		DZA65_RS08525	0.79	-0.4
1,799,694	-		DZA65_RS08525	0.82	-0.3
1,799,797	+		DZA65_RS08525	0.89	+1.5
1,799,797	+		DZA65_RS08525	0.89	-0.8
1,799,822	+				-0.8
1,799,822	+				-1.8
1,799,822	+				-0.7
1,799,823	-				-0.3
1,799,823	-				-0.8
1,799,823	-				+0.1
1,799,823	-				-0.9
1,799,823	-				+0.2
1,799,823	-				+0.0
1,799,955	-				-0.0
1,799,977	+				-0.2
1,799,978	-				-0.8
1,800,007	+				+1.8
1,800,007	+				+1.0
1,800,007	+				-0.6
1,800,008	-				-0.4
1,800,012	+				-0.2
1,800,012	+				+1.4
1,800,013	-				-0.6
1,800,164	+		DZA65_RS08530	0.12	-2.5
1,800,164	+		DZA65_RS08530	0.12	-1.0
1,800,165	-		DZA65_RS08530	0.12	+0.5
1,800,165	-		DZA65_RS08530	0.12	-0.4
1,800,165	-		DZA65_RS08530	0.12	-0.7
1,800,165	-		DZA65_RS08530	0.12	+0.8
1,800,171	+		DZA65_RS08530	0.12	+0.6
1,800,171	+		DZA65_RS08530	0.12	-0.2
1,800,172	-				+1.4
1,800,172	-		DZA65_RS08530	0.12	+0.1
1,800,172	-		DZA65_RS08530	0.12	+0.8
1,800,172	-		DZA65_RS08530	0.12	-0.1
1,800,192	+		DZA65_RS08530	0.14	-1.5
1,800,192	+		DZA65_RS08530	0.14	-0.1
1,800,192	+		DZA65_RS08530	0.14	+0.7
1,800,192	+		DZA65_RS08530	0.14	-0.0
1,800,192	+		DZA65_RS08530	0.14	-1.4
1,800,192	+		DZA65_RS08530	0.14	+1.1
1,800,193	-		DZA65_RS08530	0.14	-1.0
1,800,193	-		DZA65_RS08530	0.14	-0.5
1,800,193	-				+0.2
1,800,193	-		DZA65_RS08530	0.14	+0.8
1,800,193	-		DZA65_RS08530	0.14	+1.4
1,800,193	-		DZA65_RS08530	0.14	-1.5
1,800,193	-		DZA65_RS08530	0.14	+0.2
1,800,193	-		DZA65_RS08530	0.14	-0.5
1,800,193	-		DZA65_RS08530	0.14	-0.8
1,800,213	+		DZA65_RS08530	0.15	+0.8
1,800,213	+		DZA65_RS08530	0.15	-1.0
1,800,214	-		DZA65_RS08530	0.15	+0.1
1,800,214	-		DZA65_RS08530	0.15	+0.0
1,800,214	-		DZA65_RS08530	0.15	-0.2
1,800,271	-		DZA65_RS08530	0.19	-0.2
1,800,357	+		DZA65_RS08530	0.25	-1.0
1,800,358	-		DZA65_RS08530	0.25	-2.0
1,800,407	+		DZA65_RS08530	0.29	+0.2
1,800,414	+		DZA65_RS08530	0.29	-0.1
1,800,414	+		DZA65_RS08530	0.29	+0.4
1,800,414	+		DZA65_RS08530	0.29	-2.1
1,800,415	-		DZA65_RS08530	0.30	+0.2
1,800,415	-		DZA65_RS08530	0.30	-1.2
1,800,456	-		DZA65_RS08530	0.32	-0.5
1,800,658	-		DZA65_RS08530	0.47	+0.2
1,800,658	-		DZA65_RS08530	0.47	-0.9
1,800,665	+		DZA65_RS08530	0.47	+0.6
1,800,665	+		DZA65_RS08530	0.47	+0.4
1,800,665	+		DZA65_RS08530	0.47	-0.5
1,800,665	+		DZA65_RS08530	0.47	+0.1
1,800,666	-		DZA65_RS08530	0.47	+0.1
1,800,666	-		DZA65_RS08530	0.47	-1.0
1,800,666	-		DZA65_RS08530	0.47	-0.2
1,800,666	-		DZA65_RS08530	0.47	-0.2
1,800,666	-		DZA65_RS08530	0.47	+0.0
1,800,666	-		DZA65_RS08530	0.47	+1.0
1,800,666	-		DZA65_RS08530	0.47	-2.0
1,800,666	-		DZA65_RS08530	0.47	-0.2
1,800,668	+		DZA65_RS08530	0.47	+1.2
1,800,668	+		DZA65_RS08530	0.47	+0.1
1,800,668	+		DZA65_RS08530	0.47	-0.1
1,800,669	-		DZA65_RS08530	0.48	-0.4
1,800,669	-		DZA65_RS08530	0.48	-0.3
1,800,669	-		DZA65_RS08530	0.48	-0.5
1,800,669	-		DZA65_RS08530	0.48	-0.8
1,800,669	-		DZA65_RS08530	0.48	+0.2
1,800,684	+		DZA65_RS08530	0.49	-0.5
1,800,684	+		DZA65_RS08530	0.49	-2.6
1,800,684	+		DZA65_RS08530	0.49	+0.8
1,800,685	-		DZA65_RS08530	0.49	-0.2
1,800,685	-		DZA65_RS08530	0.49	-0.2
1,800,687	+		DZA65_RS08530	0.49	-0.5
1,800,687	+		DZA65_RS08530	0.49	-0.3
1,800,688	-		DZA65_RS08530	0.49	+0.4
1,800,700	+		DZA65_RS08530	0.50	+0.1
1,800,700	+		DZA65_RS08530	0.50	-0.2
1,800,700	+		DZA65_RS08530	0.50	+0.4
1,800,700	+		DZA65_RS08530	0.50	-0.5
1,800,700	+		DZA65_RS08530	0.50	-0.9
1,800,700	+				+1.0
1,800,700	+		DZA65_RS08530	0.50	-1.2
1,800,701	-		DZA65_RS08530	0.50	-0.2
1,800,721	+		DZA65_RS08530	0.51	-0.4
1,800,722	-		DZA65_RS08530	0.51	-0.9
1,800,722	-		DZA65_RS08530	0.51	-0.3
1,800,829	-		DZA65_RS08530	0.59	+0.2
1,800,875	+		DZA65_RS08530	0.62	+0.0
1,800,899	+		DZA65_RS08530	0.64	-0.7
1,800,899	+		DZA65_RS08530	0.64	-0.4
1,800,899	+		DZA65_RS08530	0.64	+0.4
1,800,941	-		DZA65_RS08530	0.67	-0.9
1,800,941	-		DZA65_RS08530	0.67	+0.1