Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,540,420	-		DZA65_RS20995	0.51	-0.2
4,540,453	-		DZA65_RS20995	0.56	+0.6
4,540,563	+		DZA65_RS20995	0.71	-0.1
4,540,563	+		DZA65_RS20995	0.71	+0.9
4,540,563	+		DZA65_RS20995	0.71	-0.3
4,540,563	+		DZA65_RS20995	0.71	+1.4
4,540,563	+		DZA65_RS20995	0.71	-0.4
4,540,563	+		DZA65_RS20995	0.71	-0.5
4,540,563	+		DZA65_RS20995	0.71	+1.9
4,540,563	+		DZA65_RS20995	0.71	+1.6
4,540,563	+		DZA65_RS20995	0.71	-0.1
4,540,563	+		DZA65_RS20995	0.71	-0.1
4,540,563	+		DZA65_RS20995	0.71	+0.3
4,540,563	+		DZA65_RS20995	0.71	+1.2
4,540,563	+		DZA65_RS20995	0.71	+0.9
4,540,563	+		DZA65_RS20995	0.71	-0.7
4,540,563	+		DZA65_RS20995	0.71	+0.9
4,540,563	+		DZA65_RS20995	0.71	-0.8
4,540,563	+		DZA65_RS20995	0.71	+0.9
4,540,563	+		DZA65_RS20995	0.71	-1.2
4,540,564	-		DZA65_RS20995	0.72	+0.3
4,540,564	-		DZA65_RS20995	0.72	-1.4
4,540,564	-		DZA65_RS20995	0.72	+0.1
4,540,564	-		DZA65_RS20995	0.72	-0.1
4,540,564	-		DZA65_RS20995	0.72	-0.7
4,540,564	-		DZA65_RS20995	0.72	-0.0
4,540,564	-		DZA65_RS20995	0.72	-0.1
4,540,564	-		DZA65_RS20995	0.72	-0.3
4,540,564	-		DZA65_RS20995	0.72	-0.4
4,540,564	-		DZA65_RS20995	0.72	+0.6
4,540,564	-		DZA65_RS20995	0.72	+0.1
4,540,564	-		DZA65_RS20995	0.72	+0.9
4,540,564	-		DZA65_RS20995	0.72	-1.2
4,540,564	-		DZA65_RS20995	0.72	+0.4
4,540,564	-		DZA65_RS20995	0.72	-0.7
4,540,564	-		DZA65_RS20995	0.72	+0.1
4,540,564	-		DZA65_RS20995	0.72	+0.2
4,540,564	-		DZA65_RS20995	0.72	+0.2
4,540,564	-		DZA65_RS20995	0.72	+0.5
4,540,564	-		DZA65_RS20995	0.72	+0.7
4,540,674	+		DZA65_RS20995	0.87	-0.4
4,540,674	+		DZA65_RS20995	0.87	+1.6
4,540,674	+		DZA65_RS20995	0.87	+1.0
4,540,674	+		DZA65_RS20995	0.87	+0.0
4,540,675	-		DZA65_RS20995	0.87	+0.1
4,540,675	-		DZA65_RS20995	0.87	-0.2
4,540,675	-		DZA65_RS20995	0.87	+0.2
4,540,678	-		DZA65_RS20995	0.88	+0.6
4,540,696	+				-0.8
4,540,697	-				+0.5
4,540,723	+				-0.4
4,540,724	-				+0.0
4,540,724	-				-0.9
4,540,724	-				+1.0
4,540,751	+				+0.0
4,540,751	+				-0.3
4,540,752	-				+0.2
4,540,752	-				-0.0
4,540,755	+				+1.6
4,540,755	+				-1.4
4,540,755	+				-0.8
4,540,756	-				+1.4
4,540,756	-				-0.2
4,540,756	-				+0.7
4,540,793	+				-2.0
4,540,794	-				-0.4
4,540,811	-				+1.2
4,540,838	-				-1.8
4,541,052	+				-1.1
4,541,053	-				+0.4
4,541,056	+				+0.2
4,541,056	+				-1.1
4,541,056	+				+0.1
4,541,056	+				+2.3
4,541,056	+				-1.6
4,541,056	+				+0.6
4,541,056	+				+1.6
4,541,057	-				-0.4
4,541,057	-				-0.2
4,541,057	-				+0.4
4,541,057	-				-0.1
4,541,057	-				-0.9
4,541,057	-				+0.7
4,541,057	-				+1.6
4,541,057	-				-0.3
4,541,057	-				-0.7
4,541,057	-				-0.0
4,541,057	-				-0.1
4,541,057	-				+1.2
4,541,059	+				-0.0
4,541,059	+				+0.8
4,541,059	+				+0.2
4,541,129	+				-0.6
4,541,129	+				+1.1
4,541,129	+				+0.5
4,541,130	-				-1.0
4,541,179	+				+0.2
4,541,262	+				-0.8
4,541,262	+				-0.5
4,541,263	-				-0.5
4,541,307	+				+0.1
4,541,307	+				-0.0
4,541,311	+				+1.3
4,541,311	+				+0.4
4,541,311	+				+0.0
4,541,311	+				-1.8
4,541,312	-				+0.4
4,541,312	-				+0.3
4,541,315	-				+0.0
4,541,315	-				-0.7
4,541,385	+				-1.4
4,541,409	-				-2.2
4,541,413	+				-1.4
4,541,413	+				-0.1
4,541,413	+				-0.1
4,541,413	+				-1.4
4,541,413	+				+0.0
4,541,414	-				+0.5
4,541,414	-				-3.8
4,541,414	-				+0.3
4,541,520	-		DZA65_RS21005	0.11	-0.3
4,541,550	+		DZA65_RS21005	0.14	-0.2
4,541,550	+		DZA65_RS21005	0.14	-1.5
4,541,550	+		DZA65_RS21005	0.14	-0.2
4,541,551	-		DZA65_RS21005	0.14	-0.3
4,541,571	+		DZA65_RS21005	0.16	-0.7
4,541,571	+		DZA65_RS21005	0.16	+0.6
4,541,571	+		DZA65_RS21005	0.16	-1.7
4,541,572	-		DZA65_RS21005	0.16	+2.0
4,541,572	-		DZA65_RS21005	0.16	+1.0
4,541,572	-		DZA65_RS21005	0.16	+1.0
4,541,572	-		DZA65_RS21005	0.16	-0.5
4,541,572	-		DZA65_RS21005	0.16	-0.2
4,541,572	-		DZA65_RS21005	0.16	-0.1
4,541,572	-		DZA65_RS21005	0.16	+0.7
4,541,572	-		DZA65_RS21005	0.16	-1.0
4,541,650	+		DZA65_RS21005	0.22	+0.6
4,541,650	+		DZA65_RS21005	0.22	-0.6
4,541,651	-		DZA65_RS21005	0.22	+1.5
4,541,652	+		DZA65_RS21005	0.22	-0.7
4,541,652	+		DZA65_RS21005	0.22	-0.7
4,541,652	+		DZA65_RS21005	0.22	+0.2
4,541,652	+		DZA65_RS21005	0.22	-0.4
4,541,652	+		DZA65_RS21005	0.22	+0.8
4,541,652	+		DZA65_RS21005	0.22	-0.3
4,541,652	+		DZA65_RS21005	0.22	-0.8
4,541,653	-		DZA65_RS21005	0.22	+1.3
4,541,653	-		DZA65_RS21005	0.22	+0.2
4,541,653	-		DZA65_RS21005	0.22	-0.2
4,541,653	-		DZA65_RS21005	0.22	+0.2
4,541,653	-		DZA65_RS21005	0.22	-0.5
4,541,653	-		DZA65_RS21005	0.22	-0.1
4,541,653	-		DZA65_RS21005	0.22	-0.4
4,541,653	-		DZA65_RS21005	0.22	+1.0
4,541,653	-		DZA65_RS21005	0.22	-0.9
4,541,668	+		DZA65_RS21005	0.24	+0.4
4,541,668	+		DZA65_RS21005	0.24	+1.1
4,541,694	+		DZA65_RS21005	0.26	+0.2
4,541,694	+		DZA65_RS21005	0.26	-1.7
4,541,694	+		DZA65_RS21005	0.26	-0.3
4,541,694	+		DZA65_RS21005	0.26	+0.0
4,541,695	-		DZA65_RS21005	0.26	+1.2
4,541,804	+		DZA65_RS21005	0.35	-0.2
4,541,823	+		DZA65_RS21005	0.36	-0.8
4,541,938	+		DZA65_RS21005	0.46	+0.0
4,541,939	-		DZA65_RS21005	0.46	+0.8
4,541,939	-		DZA65_RS21005	0.46	-0.3
4,541,939	-		DZA65_RS21005	0.46	+0.8
4,542,060	+		DZA65_RS21005	0.56	-0.3
4,542,060	+		DZA65_RS21005	0.56	-0.0
4,542,060	+		DZA65_RS21005	0.56	+1.2
4,542,060	+		DZA65_RS21005	0.56	+0.4
4,542,060	+		DZA65_RS21005	0.56	-1.4
4,542,060	+		DZA65_RS21005	0.56	+0.1
4,542,060	+		DZA65_RS21005	0.56	+0.9
4,542,060	+		DZA65_RS21005	0.56	+0.2
4,542,060	+		DZA65_RS21005	0.56	+0.6
4,542,060	+		DZA65_RS21005	0.56	-1.0
4,542,061	-		DZA65_RS21005	0.56	-0.4
4,542,061	-		DZA65_RS21005	0.56	-1.1
4,542,061	-		DZA65_RS21005	0.56	+0.2
4,542,061	-		DZA65_RS21005	0.56	-2.5
4,542,061	-		DZA65_RS21005	0.56	+0.1
4,542,061	-		DZA65_RS21005	0.56	-2.2
4,542,069	+		DZA65_RS21005	0.57	-1.7
4,542,069	+		DZA65_RS21005	0.57	+0.5
4,542,069	+		DZA65_RS21005	0.57	-0.7
4,542,069	+		DZA65_RS21005	0.57	-1.2
4,542,069	+		DZA65_RS21005	0.57	+0.6
4,542,069	+		DZA65_RS21005	0.57	+0.8
4,542,070	-		DZA65_RS21005	0.57	+0.7
4,542,070	-		DZA65_RS21005	0.57	+0.2
4,542,070	-		DZA65_RS21005	0.57	+0.6
4,542,084	+		DZA65_RS21005	0.58	-1.1
4,542,084	+		DZA65_RS21005	0.58	+0.6
4,542,085	-		DZA65_RS21005	0.58	+0.4
4,542,140	-		DZA65_RS21005	0.63	+0.6
4,542,140	-		DZA65_RS21005	0.63	+0.6
4,542,140	-		DZA65_RS21005	0.63	-0.5
4,542,140	-		DZA65_RS21005	0.63	-0.3
4,542,140	-		DZA65_RS21005	0.63	+0.8
4,542,159	+		DZA65_RS21005	0.64	-1.1
4,542,159	+		DZA65_RS21005	0.64	-0.4
4,542,159	+		DZA65_RS21005	0.64	-1.8
4,542,292	+		DZA65_RS21005	0.75	+1.0
4,542,328	+		DZA65_RS21005	0.78	-0.5
4,542,329	-		DZA65_RS21005	0.79	+1.3
4,542,329	-		DZA65_RS21005	0.79	-2.0
4,542,329	-		DZA65_RS21005	0.79	+0.2
4,542,414	+		DZA65_RS21005	0.86	+0.5
4,542,414	+		DZA65_RS21005	0.86	-2.1
4,542,414	+		DZA65_RS21005	0.86	+0.8
4,542,415	-		DZA65_RS21005	0.86	+0.6
4,542,415	-		DZA65_RS21005	0.86	-0.4
4,542,495	+				-0.1
4,542,495	+				-0.2
4,542,495	+				-0.4
4,542,598	+				-1.2
4,542,599	-				+0.6
4,542,599	-				+0.0
4,542,599	-				-1.8
4,542,599	-				-2.2
4,542,599	-				+0.3
4,542,617	+				-0.5
4,542,618	-				+0.9
4,542,671	+				-0.2
4,542,672	-				-0.4
4,542,672	-				+0.7
4,542,672	-				+0.4
4,542,672	-				-0.0
4,542,770	+		DZA65_RS21010	0.15	-0.9
4,542,770	+		DZA65_RS21010	0.15	+0.8
4,542,771	-		DZA65_RS21010	0.15	-0.2
4,542,771	-		DZA65_RS21010	0.15	-1.4
4,542,910	+		DZA65_RS21010	0.26	+0.7
4,542,910	+		DZA65_RS21010	0.26	+2.6
4,542,910	+		DZA65_RS21010	0.26	-1.0
4,542,911	-		DZA65_RS21010	0.26	-0.9
4,542,956	+		DZA65_RS21010	0.30	+0.2
4,542,956	+		DZA65_RS21010	0.30	-0.2
4,542,957	-		DZA65_RS21010	0.30	+0.7
4,542,957	-		DZA65_RS21010	0.30	+0.7
4,542,957	-		DZA65_RS21010	0.30	-0.2
4,542,957	-		DZA65_RS21010	0.30	-1.1
4,543,097	-		DZA65_RS21010	0.41	-0.4
4,543,345	+		DZA65_RS21010	0.61	+0.6
4,543,345	+		DZA65_RS21010	0.61	+1.5
4,543,346	-		DZA65_RS21010	0.61	-0.1
4,543,346	-		DZA65_RS21010	0.61	-2.0
4,543,346	-		DZA65_RS21010	0.61	+0.4
4,543,346	-		DZA65_RS21010	0.61	+0.6
4,543,346	-		DZA65_RS21010	0.61	-1.4
4,543,346	-		DZA65_RS21010	0.61	+0.9
4,543,346	-		DZA65_RS21010	0.61	+0.3
4,543,380	+		DZA65_RS21010	0.64	+0.7
4,543,381	-		DZA65_RS21010	0.64	-1.2
4,543,583	-		DZA65_RS21010	0.80	-0.4
4,543,583	-		DZA65_RS21010	0.80	-0.2