Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20670

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,457,592	+				+1.6
4,457,592	+		DZA65_RS20665	0.71	-0.4
4,457,593	-		DZA65_RS20665	0.71	-0.0
4,457,593	-		DZA65_RS20665	0.71	+0.1
4,457,593	-		DZA65_RS20665	0.71	+0.2
4,457,593	-		DZA65_RS20665	0.71	+0.4
4,457,607	+		DZA65_RS20665	0.72	+1.3
4,457,607	+		DZA65_RS20665	0.72	+0.4
4,457,607	+		DZA65_RS20665	0.72	+0.0
4,457,608	-		DZA65_RS20665	0.72	-0.0
4,457,686	+		DZA65_RS20665	0.79	-0.7
4,457,686	+		DZA65_RS20665	0.79	+2.3
4,457,686	+		DZA65_RS20665	0.79	-1.0
4,457,686	+		DZA65_RS20665	0.79	+0.9
4,457,686	+		DZA65_RS20665	0.79	+0.4
4,457,687	-		DZA65_RS20665	0.79	+0.6
4,457,687	-		DZA65_RS20665	0.79	-1.4
4,457,687	-		DZA65_RS20665	0.79	+1.0
4,457,696	+		DZA65_RS20665	0.80	-1.0
4,457,696	+		DZA65_RS20665	0.80	+0.4
4,457,696	+		DZA65_RS20665	0.80	-0.7
4,457,697	-		DZA65_RS20665	0.80	-0.3
4,457,697	-		DZA65_RS20665	0.80	+0.8
4,457,697	-		DZA65_RS20665	0.80	-0.2
4,457,697	-		DZA65_RS20665	0.80	-0.8
4,457,697	-		DZA65_RS20665	0.80	+0.5
4,457,697	-		DZA65_RS20665	0.80	+0.6
4,457,731	-		DZA65_RS20665	0.83	+0.4
4,457,732	+		DZA65_RS20665	0.83	+1.8
4,457,732	+		DZA65_RS20665	0.83	-1.1
4,457,732	+		DZA65_RS20665	0.83	-1.1
4,457,733	-		DZA65_RS20665	0.83	+0.0
4,457,733	-		DZA65_RS20665	0.83	-0.7
4,457,853	+				-0.4
4,457,853	+				-0.1
4,457,901	+				+0.9
4,457,902	-				-0.4
4,457,921	-				+0.1
4,457,921	-				+0.7
4,457,921	-				-1.3
4,457,925	+				-0.3
4,457,970	+				+0.8
4,457,995	+				-0.0
4,458,435	+		DZA65_RS20670	0.12	+0.1
4,458,449	+		DZA65_RS20670	0.17	-0.7
4,458,493	-		DZA65_RS20670	0.31	-1.6
4,458,496	+		DZA65_RS20670	0.31	-0.5
4,458,554	+		DZA65_RS20670	0.50	-1.2
4,458,663	+		DZA65_RS20670	0.84	-0.5
4,458,727	+				-2.5
4,458,727	+				-0.7
4,458,727	+				-0.7
4,458,727	+				+0.6
4,458,728	-				+1.3
4,458,728	-				+0.4
4,458,728	-				+1.2
4,458,777	+				-1.5
4,458,810	-				-1.5
4,458,814	-				+0.3
4,458,852	+				-1.6
4,458,860	-				-0.1
4,458,864	-				-0.8
4,458,864	-				+0.8
4,458,870	+				+0.4
4,458,871	-				-0.3
4,458,888	+				-0.6
4,458,916	+				+1.3
4,458,927	-				-0.1
4,458,938	+				-1.6
4,458,939	-				-1.1
4,458,950	-				-0.4
4,458,994	-				+0.3
4,459,145	+				-0.2
4,459,145	+				+0.7
4,459,146	-				-0.2
4,459,161	+				+0.3
4,459,161	+				-0.6
4,459,161	+				-0.0
4,459,161	+				+0.4
4,459,161	+				-1.2
4,459,161	+				-0.0
4,459,161	+				+0.8
4,459,162	-				+0.4
4,459,162	-				+0.2
4,459,162	-				-1.1
4,459,162	-				+0.8
4,459,162	-				+0.6
4,459,167	+				-0.9
4,459,167	+				-0.0
4,459,167	+				-0.9
4,459,167	+				+0.2
4,459,168	-				-1.1
4,459,168	-				-0.0
4,459,170	+				-0.1
4,459,170	+				+0.5
4,459,171	-				+0.6
4,459,171	-				-0.3
4,459,194	+				+1.4
4,459,194	+				-0.3
4,459,250	+				-0.2
4,459,250	+				-0.7
4,459,250	+				-0.6
4,459,250	+				+0.5
4,459,251	-				-0.3
4,459,251	-				-0.7
4,459,251	-				-0.0
4,459,251	-				-0.9
4,459,253	+				-0.0
4,459,253	+				+0.7
4,459,253	+				-0.0
4,459,253	+				-0.4
4,459,253	+				+0.8
4,459,253	+				-0.9
4,459,253	+				+0.3
4,459,253	+				-0.9
4,459,253	+				+0.7
4,459,254	-				-0.4
4,459,316	+				-1.2
4,459,317	-				-0.1
4,459,323	-				-2.3
4,459,329	+				-0.4
4,459,329	+				+1.0
4,459,330	-				-1.4
4,459,330	-				-0.0
4,459,330	-				+0.8
4,459,330	-				-0.1
4,459,330	-				+1.1
4,459,442	-				-1.2
4,459,484	+		DZA65_RS20675	0.12	+0.1
4,459,484	+		DZA65_RS20675	0.12	+0.4
4,459,502	+		DZA65_RS20675	0.13	-0.3
4,459,502	+		DZA65_RS20675	0.13	-1.2
4,459,502	+		DZA65_RS20675	0.13	-0.6
4,459,502	+		DZA65_RS20675	0.13	+1.0
4,459,502	+		DZA65_RS20675	0.13	-0.9
4,459,502	+		DZA65_RS20675	0.13	-0.6
4,459,503	-		DZA65_RS20675	0.13	-0.9
4,459,503	-		DZA65_RS20675	0.13	-0.0
4,459,503	-		DZA65_RS20675	0.13	-0.5
4,459,503	-		DZA65_RS20675	0.13	-1.1
4,459,503	-		DZA65_RS20675	0.13	-0.3
4,459,506	+		DZA65_RS20675	0.13	-0.6
4,459,506	+		DZA65_RS20675	0.13	-1.2
4,459,506	+		DZA65_RS20675	0.13	+0.2
4,459,507	-		DZA65_RS20675	0.13	+0.6
4,459,553	+		DZA65_RS20675	0.15	+0.2
4,459,553	+		DZA65_RS20675	0.15	-0.2
4,459,553	+		DZA65_RS20675	0.15	+0.4
4,459,554	-		DZA65_RS20675	0.16	-1.3
4,459,554	-		DZA65_RS20675	0.16	+1.0
4,459,554	-		DZA65_RS20675	0.16	+0.3
4,459,554	-		DZA65_RS20675	0.16	-1.4
4,459,554	-		DZA65_RS20675	0.16	+0.3
4,459,566	+		DZA65_RS20675	0.16	-0.9
4,459,566	+		DZA65_RS20675	0.16	-0.0
4,459,567	-		DZA65_RS20675	0.16	+0.1
4,459,567	-		DZA65_RS20675	0.16	-0.7
4,459,632	+		DZA65_RS20675	0.19	-0.0
4,459,632	+		DZA65_RS20675	0.19	-0.4
4,459,632	+		DZA65_RS20675	0.19	-1.2
4,459,633	-		DZA65_RS20675	0.20	+1.1
4,459,633	-		DZA65_RS20675	0.20	-0.7
4,459,633	-		DZA65_RS20675	0.20	-0.3
4,459,680	+		DZA65_RS20675	0.22	+0.2
4,459,680	+		DZA65_RS20675	0.22	+1.6