Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20250

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,387,184	+		DZA65_RS20245	0.26	-0.6
4,387,184	+		DZA65_RS20245	0.26	-0.9
4,387,185	-		DZA65_RS20245	0.26	+0.6
4,387,185	-		DZA65_RS20245	0.26	+1.0
4,387,197	+		DZA65_RS20245	0.27	-0.5
4,387,197	+		DZA65_RS20245	0.27	-0.6
4,387,197	+		DZA65_RS20245	0.27	+0.6
4,387,197	+		DZA65_RS20245	0.27	-0.0
4,387,197	+		DZA65_RS20245	0.27	-0.5
4,387,198	-		DZA65_RS20245	0.27	-0.1
4,387,198	-		DZA65_RS20245	0.27	-1.6
4,387,198	-		DZA65_RS20245	0.27	-0.8
4,387,198	-		DZA65_RS20245	0.27	-0.4
4,387,198	-		DZA65_RS20245	0.27	+0.6
4,387,198	-		DZA65_RS20245	0.27	-0.4
4,387,250	+		DZA65_RS20245	0.31	-1.3
4,387,250	+		DZA65_RS20245	0.31	+0.2
4,387,250	+		DZA65_RS20245	0.31	+0.1
4,387,250	+		DZA65_RS20245	0.31	+0.4
4,387,250	+		DZA65_RS20245	0.31	-0.3
4,387,250	+		DZA65_RS20245	0.31	-0.6
4,387,250	+		DZA65_RS20245	0.31	-0.7
4,387,250	+		DZA65_RS20245	0.31	-1.3
4,387,251	-		DZA65_RS20245	0.31	+1.6
4,387,251	-		DZA65_RS20245	0.31	+0.1
4,387,251	-		DZA65_RS20245	0.31	+1.0
4,387,251	-		DZA65_RS20245	0.31	+0.8
4,387,251	-		DZA65_RS20245	0.31	-0.3
4,387,251	-		DZA65_RS20245	0.31	+0.2
4,387,251	-		DZA65_RS20245	0.31	-0.1
4,387,251	-		DZA65_RS20245	0.31	-0.6
4,387,304	+		DZA65_RS20245	0.36	-0.0
4,387,304	+		DZA65_RS20245	0.36	-0.3
4,387,305	-		DZA65_RS20245	0.36	+0.6
4,387,368	+		DZA65_RS20245	0.41	-0.3
4,387,368	+		DZA65_RS20245	0.41	-0.4
4,387,369	-		DZA65_RS20245	0.41	-0.8
4,387,372	-		DZA65_RS20245	0.41	+1.1
4,387,379	-		DZA65_RS20245	0.41	-0.0
4,387,394	+		DZA65_RS20245	0.43	+0.7
4,387,395	-		DZA65_RS20245	0.43	+0.2
4,387,461	+		DZA65_RS20245	0.48	+0.5
4,387,461	+		DZA65_RS20245	0.48	+0.2
4,387,553	+		DZA65_RS20245	0.55	+0.4
4,387,553	+		DZA65_RS20245	0.55	-1.2
4,387,553	+		DZA65_RS20245	0.55	-0.8
4,387,553	+		DZA65_RS20245	0.55	-0.3
4,387,553	+		DZA65_RS20245	0.55	+0.1
4,387,554	-		DZA65_RS20245	0.55	-0.8
4,387,554	-		DZA65_RS20245	0.55	-0.1
4,387,554	-		DZA65_RS20245	0.55	-0.4
4,387,554	-		DZA65_RS20245	0.55	+0.2
4,387,554	-		DZA65_RS20245	0.55	+0.9
4,387,554	-		DZA65_RS20245	0.55	-0.6
4,387,598	+		DZA65_RS20245	0.58	+0.3
4,387,599	-		DZA65_RS20245	0.59	-0.3
4,387,599	-		DZA65_RS20245	0.59	-0.1
4,387,617	-		DZA65_RS20245	0.60	-0.6
4,387,678	+		DZA65_RS20245	0.65	-1.0
4,387,678	+		DZA65_RS20245	0.65	-1.6
4,387,678	+		DZA65_RS20245	0.65	+0.2
4,387,678	+		DZA65_RS20245	0.65	+0.6
4,387,678	+		DZA65_RS20245	0.65	+0.0
4,387,678	+		DZA65_RS20245	0.65	-0.6
4,387,678	+		DZA65_RS20245	0.65	-0.4
4,387,678	+		DZA65_RS20245	0.65	-1.0
4,387,678	+		DZA65_RS20245	0.65	+0.3
4,387,678	+		DZA65_RS20245	0.65	-0.5
4,387,679	-		DZA65_RS20245	0.65	+1.6
4,387,679	-		DZA65_RS20245	0.65	-1.4
4,387,679	-		DZA65_RS20245	0.65	-0.7
4,387,679	-		DZA65_RS20245	0.65	-0.7
4,387,679	-		DZA65_RS20245	0.65	+0.5
4,387,679	-		DZA65_RS20245	0.65	+0.4
4,387,679	-		DZA65_RS20245	0.65	+0.7
4,387,679	-		DZA65_RS20245	0.65	-0.6
4,387,679	-		DZA65_RS20245	0.65	+0.4
4,387,726	+		DZA65_RS20245	0.68	+0.7
4,387,727	-		DZA65_RS20245	0.68	-1.8
4,387,727	-		DZA65_RS20245	0.68	+0.6
4,387,727	-		DZA65_RS20245	0.68	-0.2
4,387,727	-		DZA65_RS20245	0.68	-1.1
4,387,727	-		DZA65_RS20245	0.68	-0.0
4,387,727	-		DZA65_RS20245	0.68	+0.4
4,387,727	-		DZA65_RS20245	0.68	+0.6
4,387,727	-		DZA65_RS20245	0.68	-1.1
4,387,727	-		DZA65_RS20245	0.68	+0.4
4,387,730	+		DZA65_RS20245	0.69	-0.6
4,387,730	+		DZA65_RS20245	0.69	-2.4
4,387,730	+		DZA65_RS20245	0.69	+0.4
4,387,731	-		DZA65_RS20245	0.69	+0.1
4,387,775	-		DZA65_RS20245	0.72	-1.3
4,387,775	-		DZA65_RS20245	0.72	+1.0
4,387,775	-		DZA65_RS20245	0.72	+1.1
4,387,775	-		DZA65_RS20245	0.72	-0.2
4,387,775	-		DZA65_RS20245	0.72	+0.7
4,387,840	+		DZA65_RS20245	0.77	-0.0
4,387,840	+		DZA65_RS20245	0.77	-0.0
4,387,840	+		DZA65_RS20245	0.77	-0.4
4,387,840	+		DZA65_RS20245	0.77	-0.2
4,387,840	+		DZA65_RS20245	0.77	-0.0
4,387,840	+		DZA65_RS20245	0.77	+0.7
4,387,840	+		DZA65_RS20245	0.77	+0.1
4,387,840	+		DZA65_RS20245	0.77	+0.1
4,387,840	+		DZA65_RS20245	0.77	+0.9
4,387,841	-		DZA65_RS20245	0.77	-0.3
4,387,841	-		DZA65_RS20245	0.77	-0.3
4,387,841	-		DZA65_RS20245	0.77	+0.1
4,387,841	-		DZA65_RS20245	0.77	+0.2
4,387,841	-		DZA65_RS20245	0.77	-0.8
4,387,841	-		DZA65_RS20245	0.77	+0.8
4,387,841	-		DZA65_RS20245	0.77	-0.4
4,387,844	+		DZA65_RS20245	0.78	-0.4
4,387,844	+		DZA65_RS20245	0.78	-1.1
4,387,844	+		DZA65_RS20245	0.78	-0.4
4,387,845	-		DZA65_RS20245	0.78	-0.3
4,387,845	-		DZA65_RS20245	0.78	-0.2
4,387,845	-		DZA65_RS20245	0.78	-0.3
4,387,852	+		DZA65_RS20245	0.78	-0.6
4,387,964	+		DZA65_RS20245	0.87	-0.9
4,387,964	+		DZA65_RS20245	0.87	+0.1
4,388,009	+				-0.3
4,388,009	+				+0.2
4,388,009	+				+0.1
4,388,009	+				-0.7
4,388,009	+				+1.0
4,388,009	+				+0.4
4,388,009	+				+0.2
4,388,009	+				+0.4
4,388,009	+				-0.1
4,388,009	+				+0.6
4,388,009	+				+0.3
4,388,009	+				+1.0
4,388,009	+				+0.5
4,388,009	+				-0.0
4,388,010	-				+1.4
4,388,010	-				+0.6
4,388,010	-				+0.2
4,388,010	-				-0.2
4,388,010	-				-0.3
4,388,010	-				+0.1
4,388,010	-				+0.5
4,388,010	-				-0.1
4,388,019	+				-0.5
4,388,042	+				-0.7
4,388,117	+				-0.1
4,388,117	+				+0.3
4,388,118	-				-0.0
4,388,143	+				+0.1
4,388,143	+				+0.4
4,388,143	+				+0.1
4,388,143	+				-2.0
4,388,144	-				-1.4
4,388,144	-				-0.0
4,388,155	+				+0.1
4,388,166	+				+0.7
4,388,166	+				-0.5
4,388,166	+				-0.4
4,388,166	+				-2.1
4,388,166	+				+0.6
4,388,166	+				+0.3
4,388,166	+				-0.1
4,388,166	+				-0.4
4,388,166	+				-0.7
4,388,167	-				+0.3
4,388,168	+				-0.7
4,388,169	-				+0.6
4,388,184	-				+1.8
4,388,184	-				-1.1
4,388,247	-				-0.7
4,388,247	-				-0.4
4,388,288	+				+0.4
4,388,288	+				-1.0
4,388,288	+				+0.3
4,388,288	+				-0.4
4,388,288	+				+1.0
4,388,288	+				+0.6
4,388,289	-				-0.3
4,388,289	-				+0.3
4,388,289	-				+1.3
4,388,312	+				+0.9
4,388,312	+				+0.6
4,388,312	+				-1.4
4,388,312	+				-2.5
4,388,313	-				+1.5
4,388,313	-				-1.0
4,388,349	-				-0.7
4,388,404	-				-0.5
4,388,513	+				-0.0
4,388,513	+				+0.8
4,388,522	+				+1.2
4,388,522	+				+0.1
4,388,549	+		DZA65_RS20250	0.10	-1.1
4,388,550	-		DZA65_RS20250	0.10	-1.3
4,388,606	+		DZA65_RS20250	0.12	+0.6
4,388,606	+		DZA65_RS20250	0.12	-1.5
4,388,606	+		DZA65_RS20250	0.12	+1.0
4,388,607	-		DZA65_RS20250	0.12	-2.1
4,388,607	-		DZA65_RS20250	0.12	-1.3
4,388,607	-		DZA65_RS20250	0.12	-0.9
4,388,607	-		DZA65_RS20250	0.12	-1.0
4,388,684	+		DZA65_RS20250	0.14	-0.3
4,388,684	+		DZA65_RS20250	0.14	+1.6
4,388,685	-		DZA65_RS20250	0.14	-2.1
4,388,685	-		DZA65_RS20250	0.14	+1.0
4,388,685	-		DZA65_RS20250	0.14	-1.3
4,388,732	+		DZA65_RS20250	0.15	+1.2
4,388,732	+		DZA65_RS20250	0.15	-0.2
4,388,732	+		DZA65_RS20250	0.15	+0.3
4,388,732	+		DZA65_RS20250	0.15	+1.1
4,388,732	+		DZA65_RS20250	0.15	+1.3
4,388,732	+		DZA65_RS20250	0.15	-0.8
4,388,733	-		DZA65_RS20250	0.15	-0.4
4,388,733	-		DZA65_RS20250	0.15	-0.6
4,388,733	-		DZA65_RS20250	0.15	-0.0
4,388,733	-		DZA65_RS20250	0.15	+0.1
4,388,733	-		DZA65_RS20250	0.15	-1.5
4,388,733	-		DZA65_RS20250	0.15	-0.4
4,388,814	-		DZA65_RS20250	0.17	+0.2
4,388,814	-		DZA65_RS20250	0.17	-1.5
4,388,975	+		DZA65_RS20250	0.22	-0.2
4,388,976	-		DZA65_RS20250	0.22	+0.4
4,388,976	-		DZA65_RS20250	0.22	+0.2
4,388,976	-		DZA65_RS20250	0.22	-0.5
4,389,022	-		DZA65_RS20250	0.23	+0.6
4,389,023	+		DZA65_RS20250	0.23	-1.6
4,389,023	+		DZA65_RS20250	0.23	-0.1
4,389,023	+		DZA65_RS20250	0.23	+0.3
4,389,023	+		DZA65_RS20250	0.23	-0.0
4,389,023	+		DZA65_RS20250	0.23	-1.8
4,389,023	+		DZA65_RS20250	0.23	-0.0
4,389,023	+		DZA65_RS20250	0.23	-0.0
4,389,023	+		DZA65_RS20250	0.23	-0.4
4,389,023	+		DZA65_RS20250	0.23	-1.9
4,389,023	+		DZA65_RS20250	0.23	-0.4
4,389,024	-		DZA65_RS20250	0.23	-0.4
4,389,024	-		DZA65_RS20250	0.23	+0.1
4,389,024	-		DZA65_RS20250	0.23	+2.6
4,389,024	-		DZA65_RS20250	0.23	-0.1
4,389,024	-		DZA65_RS20250	0.23	+0.6
4,389,024	-		DZA65_RS20250	0.23	-0.0
4,389,024	-		DZA65_RS20250	0.23	+0.5
4,389,061	+		DZA65_RS20250	0.24	-0.6
4,389,062	-				+0.6
4,389,090	+		DZA65_RS20250	0.25	-0.1
4,389,091	-		DZA65_RS20250	0.25	+0.1
4,389,091	-		DZA65_RS20250	0.25	-0.1
4,389,092	+		DZA65_RS20250	0.25	+1.4
4,389,092	+		DZA65_RS20250	0.25	+0.4
4,389,092	+		DZA65_RS20250	0.25	+0.9
4,389,093	-		DZA65_RS20250	0.25	-0.1
4,389,093	-		DZA65_RS20250	0.25	-0.7
4,389,093	-		DZA65_RS20250	0.25	+0.2
4,389,194	+		DZA65_RS20250	0.28	+0.6
4,389,195	-		DZA65_RS20250	0.28	+0.3
4,389,195	-		DZA65_RS20250	0.28	-0.7
4,389,287	+		DZA65_RS20250	0.30	-0.6
4,389,287	+		DZA65_RS20250	0.30	-1.4
4,389,287	+		DZA65_RS20250	0.30	+0.5
4,389,287	+				+0.2
4,389,287	+		DZA65_RS20250	0.30	-0.3
4,389,287	+		DZA65_RS20250	0.30	-0.2
4,389,287	+		DZA65_RS20250	0.30	+0.3
4,389,288	-		DZA65_RS20250	0.30	+0.2
4,389,288	-		DZA65_RS20250	0.30	+0.8
4,389,288	-		DZA65_RS20250	0.30	-0.9
4,389,288	-		DZA65_RS20250	0.30	-1.1
4,389,288	-		DZA65_RS20250	0.30	-1.4
4,389,288	-		DZA65_RS20250	0.30	+0.1
4,389,288	-		DZA65_RS20250	0.30	-1.1
4,389,288	-		DZA65_RS20250	0.30	+0.2
4,389,288	-		DZA65_RS20250	0.30	+0.2
4,389,288	-		DZA65_RS20250	0.30	-0.7
4,389,305	+		DZA65_RS20250	0.31	+1.1
4,389,305	+		DZA65_RS20250	0.31	-0.6
4,389,305	+		DZA65_RS20250	0.31	-1.3
4,389,306	-		DZA65_RS20250	0.31	+0.5
4,389,306	-		DZA65_RS20250	0.31	+0.1
4,389,306	-		DZA65_RS20250	0.31	-0.0
4,389,306	-		DZA65_RS20250	0.31	+0.7
4,389,306	-		DZA65_RS20250	0.31	+0.1
4,389,349	-		DZA65_RS20250	0.32	+0.2
4,389,408	+		DZA65_RS20250	0.34	+0.6
4,389,409	-		DZA65_RS20250	0.34	-0.0
4,389,531	-		DZA65_RS20250	0.37	+0.0
4,389,580	+		DZA65_RS20250	0.38	+0.6
4,389,580	+		DZA65_RS20250	0.38	+0.1
4,389,580	+		DZA65_RS20250	0.38	+0.1
4,389,580	+		DZA65_RS20250	0.38	-1.1
4,389,580	+		DZA65_RS20250	0.38	+0.6
4,389,580	+		DZA65_RS20250	0.38	+0.7
4,389,580	+		DZA65_RS20250	0.38	-1.8
4,389,580	+		DZA65_RS20250	0.38	+0.0
4,389,581	-		DZA65_RS20250	0.38	+0.3
4,389,581	-		DZA65_RS20250	0.38	+0.2
4,389,581	-		DZA65_RS20250	0.38	+1.1
4,389,581	-		DZA65_RS20250	0.38	-0.8
4,389,581	-		DZA65_RS20250	0.38	-0.2
4,389,636	+		DZA65_RS20250	0.40	+0.6
4,389,636	+		DZA65_RS20250	0.40	-0.4
4,389,637	-		DZA65_RS20250	0.40	-0.6
4,389,662	+		DZA65_RS20250	0.40	-0.8
4,389,700	+		DZA65_RS20250	0.42	-0.6
4,389,701	-		DZA65_RS20250	0.42	-1.3
4,389,831	+		DZA65_RS20250	0.45	-0.0
4,389,832	-		DZA65_RS20250	0.45	+0.8
4,389,941	+		DZA65_RS20250	0.48	+1.6
4,389,941	+		DZA65_RS20250	0.48	+0.1
4,389,942	-		DZA65_RS20250	0.48	-1.3
4,389,942	-		DZA65_RS20250	0.48	-0.2
4,390,040	+		DZA65_RS20250	0.51	+0.6
4,390,040	+		DZA65_RS20250	0.51	-1.8
4,390,041	-		DZA65_RS20250	0.51	-2.1
4,390,041	-		DZA65_RS20250	0.51	+0.8
4,390,041	-		DZA65_RS20250	0.51	-0.7
4,390,041	-		DZA65_RS20250	0.51	-0.4
4,390,041	-		DZA65_RS20250	0.51	+0.2
4,390,041	-		DZA65_RS20250	0.51	+2.0
4,390,041	-		DZA65_RS20250	0.51	-0.3
4,390,045	-		DZA65_RS20250	0.51	+0.6
4,390,097	+		DZA65_RS20250	0.52	+1.0
4,390,097	+		DZA65_RS20250	0.52	-0.4
4,390,098	-		DZA65_RS20250	0.52	-1.6
4,390,098	-		DZA65_RS20250	0.52	+0.6
4,390,098	-		DZA65_RS20250	0.52	+0.1
4,390,100	+		DZA65_RS20250	0.52	-0.4
4,390,100	+		DZA65_RS20250	0.52	+0.6
4,390,101	-		DZA65_RS20250	0.52	+1.3
4,390,101	-		DZA65_RS20250	0.52	-0.6
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