Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,330,129	+		DZA65_RS20020	0.48	+0.3
4,330,129	+		DZA65_RS20020	0.48	+0.3
4,330,129	+		DZA65_RS20020	0.48	+0.2
4,330,130	-		DZA65_RS20020	0.48	-0.8
4,330,130	-		DZA65_RS20020	0.48	-1.2
4,330,130	-		DZA65_RS20020	0.48	-0.0
4,330,130	-		DZA65_RS20020	0.48	+0.2
4,330,130	-		DZA65_RS20020	0.48	-1.4
4,330,130	-		DZA65_RS20020	0.48	+0.7
4,330,133	+		DZA65_RS20020	0.49	-0.8
4,330,133	+		DZA65_RS20020	0.49	+0.5
4,330,133	+		DZA65_RS20020	0.49	+0.1
4,330,133	+		DZA65_RS20020	0.49	-2.3
4,330,133	+		DZA65_RS20020	0.49	+0.6
4,330,133	+				+1.0
4,330,133	+		DZA65_RS20020	0.49	-1.3
4,330,133	+		DZA65_RS20020	0.49	-1.5
4,330,133	+		DZA65_RS20020	0.49	-0.3
4,330,133	+		DZA65_RS20020	0.49	-0.2
4,330,133	+		DZA65_RS20020	0.49	-0.0
4,330,133	+		DZA65_RS20020	0.49	+0.9
4,330,134	-		DZA65_RS20020	0.49	-0.0
4,330,134	-		DZA65_RS20020	0.49	-0.2
4,330,134	-		DZA65_RS20020	0.49	-0.2
4,330,134	-		DZA65_RS20020	0.49	-2.0
4,330,134	-		DZA65_RS20020	0.49	-0.0
4,330,134	-		DZA65_RS20020	0.49	+0.1
4,330,134	-		DZA65_RS20020	0.49	+0.2
4,330,134	-		DZA65_RS20020	0.49	-0.5
4,330,134	-				-0.5
4,330,134	-		DZA65_RS20020	0.49	+0.1
4,330,139	-		DZA65_RS20020	0.49	+0.3
4,330,234	+		DZA65_RS20020	0.55	-1.2
4,330,234	+		DZA65_RS20020	0.55	-0.3
4,330,246	+		DZA65_RS20020	0.56	-0.5
4,330,246	+		DZA65_RS20020	0.56	+1.3
4,330,247	-		DZA65_RS20020	0.56	-0.7
4,330,247	-		DZA65_RS20020	0.56	+0.2
4,330,247	-		DZA65_RS20020	0.56	-1.5
4,330,247	-		DZA65_RS20020	0.56	-0.7
4,330,297	+		DZA65_RS20020	0.59	+0.2
4,330,298	-		DZA65_RS20020	0.59	+0.4
4,330,319	+		DZA65_RS20020	0.60	-0.2
4,330,396	+		DZA65_RS20020	0.65	+0.7
4,330,397	-		DZA65_RS20020	0.65	-1.9
4,330,397	-		DZA65_RS20020	0.65	-1.1
4,330,403	+		DZA65_RS20020	0.66	-0.2
4,330,493	+		DZA65_RS20020	0.71	+2.1
4,330,494	-		DZA65_RS20020	0.72	-2.2
4,330,553	+		DZA65_RS20020	0.75	-0.5
4,330,553	+		DZA65_RS20020	0.75	-1.5
4,330,554	-		DZA65_RS20020	0.75	+0.2
4,330,554	-		DZA65_RS20020	0.75	-0.3
4,330,554	-		DZA65_RS20020	0.75	+0.7
4,330,554	-		DZA65_RS20020	0.75	-0.2
4,330,554	-		DZA65_RS20020	0.75	-0.2
4,330,554	-		DZA65_RS20020	0.75	-2.0
4,330,559	+		DZA65_RS20020	0.76	-0.5
4,330,622	+		DZA65_RS20020	0.80	-0.2
4,330,623	-		DZA65_RS20020	0.80	-0.3
4,330,635	-		DZA65_RS20020	0.80	+0.2
4,330,635	-		DZA65_RS20020	0.80	-1.8
4,330,635	-		DZA65_RS20020	0.80	+0.1
4,330,639	+		DZA65_RS20020	0.81	-0.6
4,330,640	-		DZA65_RS20020	0.81	+1.0
4,330,640	-		DZA65_RS20020	0.81	-0.3
4,330,640	-		DZA65_RS20020	0.81	-0.4
4,330,640	-		DZA65_RS20020	0.81	+0.5
4,330,643	+		DZA65_RS20020	0.81	+0.0
4,330,677	+		DZA65_RS20020	0.83	-0.3
4,330,677	+		DZA65_RS20020	0.83	-0.0
4,330,677	+		DZA65_RS20020	0.83	-1.1
4,330,677	+		DZA65_RS20020	0.83	+0.5
4,330,677	+		DZA65_RS20020	0.83	+0.0
4,330,677	+		DZA65_RS20020	0.83	-0.5
4,330,677	+		DZA65_RS20020	0.83	-0.0
4,330,677	+		DZA65_RS20020	0.83	-0.6
4,330,677	+		DZA65_RS20020	0.83	+0.8
4,330,678	-		DZA65_RS20020	0.83	-1.4
4,330,678	-		DZA65_RS20020	0.83	-0.2
4,330,678	-		DZA65_RS20020	0.83	-0.4
4,330,678	-		DZA65_RS20020	0.83	+1.0
4,330,678	-		DZA65_RS20020	0.83	+0.5
4,330,678	-		DZA65_RS20020	0.83	+1.5
4,330,678	-		DZA65_RS20020	0.83	+1.0
4,330,678	-		DZA65_RS20020	0.83	+1.0
4,330,681	+		DZA65_RS20020	0.83	-0.2
4,330,681	+		DZA65_RS20020	0.83	+0.1
4,330,681	+		DZA65_RS20020	0.83	-1.3
4,330,681	+		DZA65_RS20020	0.83	+1.2
4,330,681	+		DZA65_RS20020	0.83	-0.0
4,330,682	-		DZA65_RS20020	0.83	-1.9
4,330,691	+		DZA65_RS20020	0.84	-0.8
4,330,691	+		DZA65_RS20020	0.84	+0.1
4,330,691	+		DZA65_RS20020	0.84	-1.3
4,330,692	-		DZA65_RS20020	0.84	-0.3
4,330,996	+				-0.6
4,330,996	+				-0.3
4,330,998	+				+0.2
4,330,998	+				-1.5
4,331,002	+				-0.8
4,331,002	+				-0.1
4,331,002	+				-0.6
4,331,002	+				+0.3
4,331,003	-				+1.1
4,331,003	-				-0.9
4,331,003	-				-1.0
4,331,015	+				-0.0
4,331,015	+				+0.3
4,331,015	+				-0.0
4,331,015	+				+0.3
4,331,019	+				+1.2
4,331,019	+				+0.5
4,331,019	+				+0.2
4,331,019	+				+0.2
4,331,019	+				-1.2
4,331,019	+				-1.5
4,331,019	+				-0.3
4,331,019	+				-0.3
4,331,020	-				-0.9
4,331,020	-				-0.3
4,331,020	-				+0.1
4,331,020	-				-1.5
4,331,020	-				-1.0
4,331,020	-				+0.7
4,331,020	-				-0.6
4,331,020	-				-1.4
4,331,020	-				-0.0
4,331,020	-				+0.3
4,331,020	-				-0.8
4,331,122	+				+0.3
4,331,123	-				+0.1
4,331,123	-				-1.8
4,331,132	-				+0.7
4,331,143	+				-0.4
4,331,144	-				+1.5
4,331,144	-				+0.1
4,331,194	+		DZA65_RS20025	0.11	+0.1
4,331,194	+		DZA65_RS20025	0.11	+0.2
4,331,195	-		DZA65_RS20025	0.12	-2.7
4,331,261	-		DZA65_RS20025	0.16	-0.7
4,331,321	-		DZA65_RS20025	0.20	+0.0
4,331,321	-		DZA65_RS20025	0.20	+0.3
4,331,321	-		DZA65_RS20025	0.20	+2.5
4,331,321	-		DZA65_RS20025	0.20	-1.3
4,331,330	+		DZA65_RS20025	0.21	-0.6
4,331,419	+		DZA65_RS20025	0.27	-0.5
4,331,420	-				+0.5
4,331,455	+		DZA65_RS20025	0.29	+0.8
4,331,488	+		DZA65_RS20025	0.32	-0.0
4,331,590	+		DZA65_RS20025	0.39	+0.5
4,331,590	+		DZA65_RS20025	0.39	+0.2
4,331,590	+		DZA65_RS20025	0.39	+0.5
4,331,590	+		DZA65_RS20025	0.39	-1.0
4,331,590	+		DZA65_RS20025	0.39	-1.5
4,331,590	+		DZA65_RS20025	0.39	-0.2
4,331,590	+		DZA65_RS20025	0.39	-0.7
4,331,590	+		DZA65_RS20025	0.39	-1.0
4,331,591	-		DZA65_RS20025	0.39	+0.3
4,331,591	-		DZA65_RS20025	0.39	-0.0
4,331,638	+		DZA65_RS20025	0.42	+0.5
4,331,638	+		DZA65_RS20025	0.42	+0.4
4,331,638	+		DZA65_RS20025	0.42	-0.5
4,331,638	+		DZA65_RS20025	0.42	+0.1
4,331,638	+		DZA65_RS20025	0.42	-0.3
4,331,638	+		DZA65_RS20025	0.42	-0.4
4,331,638	+		DZA65_RS20025	0.42	-0.3
4,331,638	+		DZA65_RS20025	0.42	-1.5
4,331,638	+		DZA65_RS20025	0.42	-0.2
4,331,638	+		DZA65_RS20025	0.42	-1.3
4,331,638	+		DZA65_RS20025	0.42	+1.3
4,331,638	+		DZA65_RS20025	0.42	+0.3
4,331,638	+		DZA65_RS20025	0.42	-0.0
4,331,639	-		DZA65_RS20025	0.42	-0.4
4,331,639	-		DZA65_RS20025	0.42	-0.8
4,331,639	-		DZA65_RS20025	0.42	-0.3
4,331,639	-		DZA65_RS20025	0.42	-0.7
4,331,639	-		DZA65_RS20025	0.42	+0.4
4,331,639	-		DZA65_RS20025	0.42	-0.0
4,331,794	+		DZA65_RS20025	0.53	-0.9
4,331,794	+		DZA65_RS20025	0.53	-0.9
4,331,794	+		DZA65_RS20025	0.53	-0.1
4,331,794	+		DZA65_RS20025	0.53	-0.4
4,331,795	-		DZA65_RS20025	0.53	-1.3
4,331,795	-		DZA65_RS20025	0.53	+0.4
4,331,819	-		DZA65_RS20025	0.55	-0.8
4,331,819	-		DZA65_RS20025	0.55	+0.1
4,331,819	-		DZA65_RS20025	0.55	-0.3
4,332,093	-				+1.1
4,332,093	-		DZA65_RS20025	0.73	+0.5
4,332,178	+		DZA65_RS20025	0.79	-2.8
4,332,178	+		DZA65_RS20025	0.79	-0.3
4,332,178	+		DZA65_RS20025	0.79	-0.1
4,332,178	+		DZA65_RS20025	0.79	-1.6
4,332,179	-		DZA65_RS20025	0.79	-0.4
4,332,179	-		DZA65_RS20025	0.79	-1.5
4,332,179	-		DZA65_RS20025	0.79	+0.1
4,332,181	+		DZA65_RS20025	0.80	-0.1
4,332,181	+		DZA65_RS20025	0.80	-0.3
4,332,181	+		DZA65_RS20025	0.80	-0.2
4,332,181	+		DZA65_RS20025	0.80	-0.3
4,332,181	+		DZA65_RS20025	0.80	-0.5
4,332,181	+		DZA65_RS20025	0.80	+0.7
4,332,181	+		DZA65_RS20025	0.80	-0.4
4,332,181	+		DZA65_RS20025	0.80	+0.4
4,332,181	+		DZA65_RS20025	0.80	+0.2
4,332,181	+		DZA65_RS20025	0.80	-0.6
4,332,182	-		DZA65_RS20025	0.80	-0.8
4,332,182	-		DZA65_RS20025	0.80	+1.3
4,332,182	-		DZA65_RS20025	0.80	-0.0
4,332,182	-		DZA65_RS20025	0.80	-1.4
4,332,182	-		DZA65_RS20025	0.80	+0.4
4,332,182	-		DZA65_RS20025	0.80	-0.3
4,332,182	-		DZA65_RS20025	0.80	+0.4
4,332,205	+		DZA65_RS20025	0.81	+1.0
4,332,205	+		DZA65_RS20025	0.81	+1.0
4,332,206	-		DZA65_RS20025	0.81	-0.3
4,332,254	+				+1.1
4,332,255	-		DZA65_RS20025	0.85	+2.1
4,332,255	-		DZA65_RS20025	0.85	-0.8
4,332,265	-		DZA65_RS20025	0.85	-1.1
4,332,265	-		DZA65_RS20025	0.85	-0.8
4,332,441	+				-0.2
4,332,441	+				-0.2
4,332,441	+				-0.4
4,332,442	-				+1.2
4,332,442	-				-0.8
4,332,452	+				-0.8
4,332,452	+				+1.5
4,332,453	-				-0.0
4,332,453	-				-2.2
4,332,490	+				-0.5
4,332,491	-				-1.0
4,332,491	-				+0.2
4,332,615	+				+0.5
4,332,616	-				-0.5
4,332,616	-				-0.1
4,332,676	-		DZA65_RS20030	0.16	+0.3
4,332,676	-		DZA65_RS20030	0.16	-0.4
4,332,698	-		DZA65_RS20030	0.18	-0.1
4,332,728	-		DZA65_RS20030	0.22	-0.4
4,332,863	+		DZA65_RS20030	0.37	+0.1
4,332,863	+		DZA65_RS20030	0.37	-1.9
4,332,863	+		DZA65_RS20030	0.37	-0.3
4,332,864	-		DZA65_RS20030	0.37	+0.4
4,332,864	-		DZA65_RS20030	0.37	+0.1
4,332,905	-		DZA65_RS20030	0.42	-0.1
4,332,905	-		DZA65_RS20030	0.42	+0.5
4,332,926	+		DZA65_RS20030	0.44	-0.3
4,332,926	+		DZA65_RS20030	0.44	-0.6
4,332,927	-		DZA65_RS20030	0.44	-1.5
4,332,927	-		DZA65_RS20030	0.44	-0.0
4,332,927	-		DZA65_RS20030	0.44	+0.0
4,332,927	-		DZA65_RS20030	0.44	-0.0
4,332,927	-		DZA65_RS20030	0.44	+1.0
4,332,940	+		DZA65_RS20030	0.46	-1.3
4,332,941	-		DZA65_RS20030	0.46	+1.4
4,332,941	-		DZA65_RS20030	0.46	-0.3
4,332,941	-		DZA65_RS20030	0.46	+0.4
4,332,941	-				+1.1
4,332,941	-		DZA65_RS20030	0.46	-0.6
4,332,973	+		DZA65_RS20030	0.49	+0.1
4,332,973	+		DZA65_RS20030	0.49	+0.0
4,332,974	-		DZA65_RS20030	0.50	+0.4
4,332,974	-		DZA65_RS20030	0.50	-0.0
4,332,974	-		DZA65_RS20030	0.50	-1.2
4,332,974	-		DZA65_RS20030	0.50	-1.3
4,332,974	-		DZA65_RS20030	0.50	-0.3
4,333,023	+		DZA65_RS20030	0.55	+0.2
4,333,024	-		DZA65_RS20030	0.55	-0.6
4,333,045	+		DZA65_RS20030	0.58	-2.5
4,333,045	+		DZA65_RS20030	0.58	-0.0
4,333,045	+		DZA65_RS20030	0.58	-0.0
4,333,046	-		DZA65_RS20030	0.58	+0.7
4,333,046	-		DZA65_RS20030	0.58	+1.5
4,333,046	-		DZA65_RS20030	0.58	+0.7
4,333,046	-		DZA65_RS20030	0.58	-0.0
4,333,072	+		DZA65_RS20030	0.61	-0.1
4,333,072	+		DZA65_RS20030	0.61	+0.3
4,333,072	+		DZA65_RS20030	0.61	-0.0
4,333,373	+				+0.0
4,333,393	+				-2.0
4,333,393	+				+0.3
4,333,393	+				-0.9
4,333,393	+				-0.0
4,333,393	+				+1.3
4,333,393	+				+0.2
4,333,393	+				+0.5
4,333,393	+				+0.3
4,333,394	-				+0.8
4,333,394	-				-0.4
4,333,394	-				-0.3
4,333,394	-				+0.8
4,333,394	-				-0.0
4,333,394	-				+0.1
4,333,394	-				+1.0
4,333,394	-				-1.6
4,333,394	-				-0.2
4,333,394	-				+1.8