Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,291,641	-				-1.2
4,291,684	-				+1.1
4,291,689	+				-1.8
4,291,708	+				+0.5
4,291,708	+				-1.1
4,291,715	-				-0.9
4,291,717	-				+1.5
4,291,752	+				-0.4
4,291,753	-				+0.7
4,291,762	+				-2.3
4,291,762	+				+0.0
4,291,763	-				+0.4
4,291,763	-				-0.9
4,291,783	-				-0.1
4,291,794	+				-0.2
4,291,803	-				-0.6
4,291,850	+				-1.0
4,291,850	+				+1.5
4,291,861	+				-0.2
4,291,861	+				-0.5
4,291,862	-				+1.0
4,291,862	-				-0.1
4,291,862	-				-0.9
4,291,865	-				-0.1
4,291,865	-				-1.3
4,291,886	+				-0.4
4,291,887	-				+0.8
4,291,887	-				-0.8
4,291,953	+				+0.0
4,291,954	-				-1.3
4,291,962	+				-1.4
4,291,962	+				-0.2
4,291,963	-				-1.0
4,291,963	-				-0.3
4,291,968	+				-0.3
4,291,968	+				+0.7
4,291,968	+				-0.3
4,291,968	+				-0.2
4,291,969	-				-0.2
4,291,969	-				+1.9
4,291,969	-				+0.3
4,291,969	-				-0.4
4,291,970	+				-1.0
4,291,970	+				+0.3
4,291,970	+				-0.1
4,291,970	+				+0.7
4,291,970	+				-0.7
4,291,970	+				-0.6
4,291,970	+				-1.1
4,291,971	-				-0.8
4,291,971	-				-1.0
4,291,971	-				+0.7
4,291,971	-				+0.3
4,291,971	-				-0.8
4,291,971	-				-0.8
4,292,000	+				-0.0
4,292,000	+				-0.3
4,292,001	-				+0.0
4,292,025	+		DZA65_RS19835	0.11	+0.7
4,292,099	+		DZA65_RS19835	0.21	+0.2
4,292,100	-		DZA65_RS19835	0.22	-0.9
4,292,113	+		DZA65_RS19835	0.24	-0.3
4,292,114	-		DZA65_RS19835	0.24	-1.1
4,292,150	+		DZA65_RS19835	0.29	-1.3
4,292,151	-		DZA65_RS19835	0.29	+0.5
4,292,185	+		DZA65_RS19835	0.34	-1.3
4,292,186	-		DZA65_RS19835	0.34	-1.8
4,292,186	-		DZA65_RS19835	0.34	+0.7
4,292,186	-		DZA65_RS19835	0.34	-1.3
4,292,230	+		DZA65_RS19835	0.41	-1.2
4,292,230	+		DZA65_RS19835	0.41	+0.3
4,292,230	+		DZA65_RS19835	0.41	+0.3
4,292,231	-		DZA65_RS19835	0.41	-0.0
4,292,231	-		DZA65_RS19835	0.41	-0.6
4,292,231	-		DZA65_RS19835	0.41	+1.0
4,292,255	-		DZA65_RS19835	0.45	+0.1
4,292,255	-		DZA65_RS19835	0.45	-0.4
4,292,274	+		DZA65_RS19835	0.47	-0.5
4,292,274	+		DZA65_RS19835	0.47	-1.3
4,292,275	-		DZA65_RS19835	0.48	-0.4
4,292,312	-		DZA65_RS19835	0.53	-0.3
4,292,312	-		DZA65_RS19835	0.53	+0.2
4,292,387	+		DZA65_RS19835	0.64	-1.8
4,292,387	+		DZA65_RS19835	0.64	+0.0
4,292,405	+		DZA65_RS19835	0.67	-1.2
4,292,405	+		DZA65_RS19835	0.67	+0.3
4,292,450	-		DZA65_RS19835	0.73	+0.4
4,292,462	-		DZA65_RS19835	0.75	+1.0
4,292,598	-				+0.2
4,292,607	+				-0.5
4,292,687	-				-0.2
4,292,687	-				-0.5
4,292,692	+				-0.8
4,292,692	+				+0.1
4,292,692	+				+0.5
4,292,692	+				+1.0
4,292,692	+				-0.5
4,292,693	-				+1.1
4,292,724	+		DZA65_RS19840	0.12	-0.5
4,292,724	+		DZA65_RS19840	0.12	+0.8
4,292,725	-		DZA65_RS19840	0.12	-0.5
4,292,764	-		DZA65_RS19840	0.16	-0.1
4,292,849	+		DZA65_RS19840	0.24	-0.8
4,292,849	+		DZA65_RS19840	0.24	-0.6
4,292,849	+		DZA65_RS19840	0.24	+0.8
4,292,849	+		DZA65_RS19840	0.24	+0.1
4,292,849	+		DZA65_RS19840	0.24	+0.5
4,292,849	+		DZA65_RS19840	0.24	-0.4
4,292,849	+		DZA65_RS19840	0.24	+0.4
4,292,850	-		DZA65_RS19840	0.24	-1.5
4,292,850	-		DZA65_RS19840	0.24	-0.5
4,292,850	-		DZA65_RS19840	0.24	+0.7
4,292,850	-		DZA65_RS19840	0.24	+0.2
4,292,877	+		DZA65_RS19840	0.27	-0.9
4,292,877	+		DZA65_RS19840	0.27	-0.8
4,292,877	+		DZA65_RS19840	0.27	+0.5
4,292,877	+		DZA65_RS19840	0.27	-0.8
4,292,877	+		DZA65_RS19840	0.27	-0.2
4,292,877	+		DZA65_RS19840	0.27	+0.3
4,292,877	+		DZA65_RS19840	0.27	+0.3
4,292,877	+		DZA65_RS19840	0.27	+0.8
4,292,877	+		DZA65_RS19840	0.27	-1.3
4,292,877	+		DZA65_RS19840	0.27	-0.8
4,292,877	+		DZA65_RS19840	0.27	+1.8
4,292,877	+		DZA65_RS19840	0.27	+0.7
4,292,877	+		DZA65_RS19840	0.27	-0.1
4,292,878	-		DZA65_RS19840	0.27	+1.5
4,292,878	-		DZA65_RS19840	0.27	-0.9
4,292,878	-		DZA65_RS19840	0.27	+0.7
4,292,878	-		DZA65_RS19840	0.27	-0.3
4,292,878	-		DZA65_RS19840	0.27	+1.5
4,292,878	-		DZA65_RS19840	0.27	+0.0
4,292,878	-		DZA65_RS19840	0.27	-0.3
4,292,878	-		DZA65_RS19840	0.27	-0.6
4,292,878	-		DZA65_RS19840	0.27	-1.1
4,292,878	-		DZA65_RS19840	0.27	-1.5
4,292,878	-		DZA65_RS19840	0.27	-0.9
4,292,886	+		DZA65_RS19840	0.28	-0.9
4,292,886	+		DZA65_RS19840	0.28	-0.1
4,292,886	+		DZA65_RS19840	0.28	-0.7
4,292,886	+		DZA65_RS19840	0.28	+1.9
4,292,886	+		DZA65_RS19840	0.28	+0.7
4,292,886	+		DZA65_RS19840	0.28	+1.6
4,292,886	+		DZA65_RS19840	0.28	-0.7
4,292,886	+		DZA65_RS19840	0.28	+0.8
4,292,886	+		DZA65_RS19840	0.28	+0.6
4,292,886	+		DZA65_RS19840	0.28	+0.7
4,292,887	-		DZA65_RS19840	0.28	+0.1
4,292,887	-		DZA65_RS19840	0.28	+0.5
4,292,887	-		DZA65_RS19840	0.28	-1.8
4,292,887	-		DZA65_RS19840	0.28	-0.4
4,292,887	-		DZA65_RS19840	0.28	-0.1
4,292,887	-		DZA65_RS19840	0.28	+0.1
4,292,887	-		DZA65_RS19840	0.28	+0.9
4,292,887	-		DZA65_RS19840	0.28	-1.5
4,292,887	-		DZA65_RS19840	0.28	-0.5
4,292,887	-		DZA65_RS19840	0.28	-0.4
4,292,887	-		DZA65_RS19840	0.28	+0.0
4,292,887	-		DZA65_RS19840	0.28	+0.5
4,292,887	-		DZA65_RS19840	0.28	-0.1
4,292,887	-		DZA65_RS19840	0.28	-0.1
4,292,890	+		DZA65_RS19840	0.28	-1.1
4,292,890	+		DZA65_RS19840	0.28	-0.5
4,292,890	+		DZA65_RS19840	0.28	+0.1
4,292,890	+		DZA65_RS19840	0.28	+0.1
4,292,890	+		DZA65_RS19840	0.28	-1.9
4,292,890	+		DZA65_RS19840	0.28	+1.4
4,292,890	+		DZA65_RS19840	0.28	+0.7
4,292,890	+		DZA65_RS19840	0.28	+0.1
4,292,891	-		DZA65_RS19840	0.28	+1.3
4,292,891	-		DZA65_RS19840	0.28	-0.1
4,292,891	-		DZA65_RS19840	0.28	-0.5
4,292,891	-		DZA65_RS19840	0.28	-0.1
4,292,891	-		DZA65_RS19840	0.28	+0.5
4,292,892	+		DZA65_RS19840	0.29	-0.5
4,292,892	+		DZA65_RS19840	0.29	+0.3
4,292,893	-		DZA65_RS19840	0.29	+0.6
4,292,893	-		DZA65_RS19840	0.29	+1.5
4,292,893	-		DZA65_RS19840	0.29	-2.6
4,292,893	-		DZA65_RS19840	0.29	-0.3
4,293,155	-		DZA65_RS19840	0.55	+0.8
4,293,155	-		DZA65_RS19840	0.55	+1.3
4,293,198	-		DZA65_RS19840	0.59	-0.1
4,293,198	-		DZA65_RS19840	0.59	-0.5
4,293,198	-		DZA65_RS19840	0.59	+0.8
4,293,198	-		DZA65_RS19840	0.59	-0.9
4,293,198	-		DZA65_RS19840	0.59	-0.8
4,293,202	+		DZA65_RS19840	0.59	-0.3
4,293,203	-		DZA65_RS19840	0.60	-1.1
4,293,203	-		DZA65_RS19840	0.60	+0.2
4,293,323	+		DZA65_RS19840	0.72	-0.8
4,293,323	+		DZA65_RS19840	0.72	-1.4
4,293,323	+		DZA65_RS19840	0.72	-0.7
4,293,323	+		DZA65_RS19840	0.72	-0.2
4,293,324	-		DZA65_RS19840	0.72	-1.1
4,293,326	+		DZA65_RS19840	0.72	-0.3
4,293,326	+		DZA65_RS19840	0.72	-0.2
4,293,326	+		DZA65_RS19840	0.72	-0.3
4,293,326	+		DZA65_RS19840	0.72	+1.1
4,293,326	+		DZA65_RS19840	0.72	-0.5
4,293,326	+		DZA65_RS19840	0.72	+0.1
4,293,326	+		DZA65_RS19840	0.72	+0.2
4,293,326	+		DZA65_RS19840	0.72	-0.5
4,293,326	+		DZA65_RS19840	0.72	-0.1
4,293,326	+		DZA65_RS19840	0.72	+0.3
4,293,326	+		DZA65_RS19840	0.72	-0.2
4,293,327	-		DZA65_RS19840	0.72	-1.5
4,293,327	-		DZA65_RS19840	0.72	-0.6
4,293,327	-		DZA65_RS19840	0.72	+0.9
4,293,327	-		DZA65_RS19840	0.72	-1.1
4,293,327	-		DZA65_RS19840	0.72	-0.1
4,293,327	-		DZA65_RS19840	0.72	+0.4
4,293,327	-		DZA65_RS19840	0.72	+0.3
4,293,327	-		DZA65_RS19840	0.72	-1.2
4,293,327	-		DZA65_RS19840	0.72	+0.0
4,293,327	-		DZA65_RS19840	0.72	-0.5
4,293,349	+		DZA65_RS19840	0.74	-0.0
4,293,349	+		DZA65_RS19840	0.74	-1.8
4,293,349	+		DZA65_RS19840	0.74	+0.2
4,293,349	+		DZA65_RS19840	0.74	-0.2
4,293,349	+		DZA65_RS19840	0.74	+0.6
4,293,349	+		DZA65_RS19840	0.74	-0.5
4,293,349	+		DZA65_RS19840	0.74	+1.1
4,293,349	+		DZA65_RS19840	0.74	-0.8
4,293,349	+		DZA65_RS19840	0.74	+0.0
4,293,349	+		DZA65_RS19840	0.74	+0.4
4,293,350	-		DZA65_RS19840	0.74	+0.2
4,293,350	-		DZA65_RS19840	0.74	-0.6
4,293,350	-		DZA65_RS19840	0.74	-0.5
4,293,351	+		DZA65_RS19840	0.74	+1.0
4,293,351	+		DZA65_RS19840	0.74	+1.4
4,293,351	+		DZA65_RS19840	0.74	-1.7
4,293,352	-		DZA65_RS19840	0.74	+1.2
4,293,352	-		DZA65_RS19840	0.74	-0.2
4,293,352	-		DZA65_RS19840	0.74	+0.1
4,293,352	-		DZA65_RS19840	0.74	-0.3
4,293,360	+		DZA65_RS19840	0.75	+0.1
4,293,361	-		DZA65_RS19840	0.75	+0.2
4,293,368	+		DZA65_RS19840	0.76	+0.5
4,293,368	+		DZA65_RS19840	0.76	-1.1
4,293,368	+		DZA65_RS19840	0.76	-0.9
4,293,368	+		DZA65_RS19840	0.76	+0.8
4,293,368	+		DZA65_RS19840	0.76	+0.6
4,293,368	+				-0.1
4,293,368	+		DZA65_RS19840	0.76	-0.1
4,293,369	-		DZA65_RS19840	0.76	-0.5
4,293,369	-		DZA65_RS19840	0.76	-2.6
4,293,369	-		DZA65_RS19840	0.76	-0.2
4,293,495	+		DZA65_RS19840	0.89	-0.4
4,293,495	+		DZA65_RS19840	0.89	-0.2
4,293,496	-		DZA65_RS19840	0.89	+0.0
4,293,496	-		DZA65_RS19840	0.89	+0.7
4,293,601	-				+0.7
4,293,607	+				-0.4
4,293,607	+				-0.2
4,293,608	-				-1.4
4,293,609	+				+1.5
4,293,610	-				-0.3
4,293,610	-				-1.5
4,293,645	+				+0.7
4,293,646	-				+0.1
4,293,653	+				-0.9
4,293,690	+				-0.4
4,293,690	+				-0.9
4,293,694	-				-0.1
4,293,745	+				-0.6
4,293,750	-				+0.1
4,293,753	+				-0.1
4,293,754	-				-0.8
4,293,766	+				-0.2
4,293,795	-				-1.7
4,293,801	-				+0.3
4,293,876	-				-1.2
4,293,893	+				-0.5
4,293,893	+				-0.1
4,293,902	+				-0.3
4,293,917	-				+0.1
4,294,021	+				+0.6
4,294,022	-				-0.9
4,294,248	+		DZA65_RS19845	0.15	+0.1
4,294,248	+		DZA65_RS19845	0.15	-0.9
4,294,248	+		DZA65_RS19845	0.15	-1.7
4,294,248	+		DZA65_RS19845	0.15	+0.3
4,294,248	+		DZA65_RS19845	0.15	+0.1
4,294,248	+		DZA65_RS19845	0.15	-0.2
4,294,248	+		DZA65_RS19845	0.15	-0.6
4,294,248	+		DZA65_RS19845	0.15	-0.1
4,294,248	+		DZA65_RS19845	0.15	-0.4
4,294,248	+		DZA65_RS19845	0.15	-0.3
4,294,248	+		DZA65_RS19845	0.15	+0.2
4,294,248	+		DZA65_RS19845	0.15	+0.1
4,294,248	+		DZA65_RS19845	0.15	-0.7
4,294,249	-		DZA65_RS19845	0.16	-0.0
4,294,249	-		DZA65_RS19845	0.16	+0.0
4,294,249	-		DZA65_RS19845	0.16	-0.1
4,294,249	-		DZA65_RS19845	0.16	-0.7
4,294,249	-		DZA65_RS19845	0.16	-1.7
4,294,365	+		DZA65_RS19845	0.24	-0.2
4,294,365	+		DZA65_RS19845	0.24	-1.1
4,294,365	+		DZA65_RS19845	0.24	+0.7
4,294,365	+		DZA65_RS19845	0.24	+0.7
4,294,366	-		DZA65_RS19845	0.24	+0.5
4,294,366	-		DZA65_RS19845	0.24	-1.2
4,294,366	-		DZA65_RS19845	0.24	-0.1
4,294,366	-		DZA65_RS19845	0.24	+1.2