Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,260,763	+		DZA65_RS19675	0.71	-1.4
4,260,763	+		DZA65_RS19675	0.71	-0.9
4,260,764	-		DZA65_RS19675	0.72	+0.2
4,260,764	-		DZA65_RS19675	0.72	-0.8
4,260,764	-		DZA65_RS19675	0.72	-0.6
4,260,859	-		DZA65_RS19675	0.79	-1.3
4,260,962	+		DZA65_RS19675	0.87	+0.5
4,260,963	-				+1.9
4,261,012	+				-1.1
4,261,083	+				-0.6
4,261,083	+				+0.5
4,261,084	-				-0.8
4,261,084	-				-0.6
4,261,090	+				+0.3
4,261,090	+				-1.1
4,261,090	+				-1.3
4,261,090	+				+0.5
4,261,090	+				-0.5
4,261,091	-				-0.4
4,261,091	-				+0.7
4,261,091	-				-0.8
4,261,091	-				-0.0
4,261,091	-				-0.4
4,261,091	-				-0.5
4,261,091	-				+0.0
4,261,091	-				-0.8
4,261,094	-				-1.2
4,261,116	-				-0.3
4,261,165	-				+0.4
4,261,165	-				-1.0
4,261,220	-				-0.5
4,261,280	-		DZA65_RS19680	0.21	-0.7
4,261,280	-		DZA65_RS19680	0.21	+0.1
4,261,280	-		DZA65_RS19680	0.21	-0.5
4,261,280	-		DZA65_RS19680	0.21	-0.2
4,261,280	-		DZA65_RS19680	0.21	-0.4
4,261,284	-		DZA65_RS19680	0.22	+0.5
4,261,284	-		DZA65_RS19680	0.22	-2.2
4,261,284	-		DZA65_RS19680	0.22	+0.4
4,261,284	-		DZA65_RS19680	0.22	-0.6
4,261,284	-		DZA65_RS19680	0.22	+0.5
4,261,284	-		DZA65_RS19680	0.22	+0.1
4,261,299	-		DZA65_RS19680	0.27	+0.0
4,261,299	-		DZA65_RS19680	0.27	-0.1
4,261,299	-		DZA65_RS19680	0.27	-0.0
4,261,299	-		DZA65_RS19680	0.27	+0.1
4,261,301	+		DZA65_RS19680	0.28	-0.2
4,261,302	-		DZA65_RS19680	0.28	+1.1
4,261,302	-		DZA65_RS19680	0.28	+0.8
4,261,302	-		DZA65_RS19680	0.28	-0.3
4,261,302	-		DZA65_RS19680	0.28	-0.6
4,261,305	-		DZA65_RS19680	0.29	-0.1
4,261,305	-		DZA65_RS19680	0.29	-0.6
4,261,305	-		DZA65_RS19680	0.29	+0.2
4,261,305	-		DZA65_RS19680	0.29	+1.6
4,261,305	-		DZA65_RS19680	0.29	+0.1
4,261,305	-		DZA65_RS19680	0.29	+0.2
4,261,305	-		DZA65_RS19680	0.29	+0.3
4,261,581	-				-0.4
4,261,630	-				-0.1
4,261,630	-				-0.4
4,261,630	-				-0.3
4,261,630	-				+0.6
4,261,642	-				+0.8
4,261,663	+				-1.6
4,261,664	-				-0.1
4,261,664	-				-1.1
4,261,664	-				-1.1
4,261,664	-				+0.5
4,261,664	-				-1.3
4,261,664	-				-0.3
4,261,664	-				-0.8
4,261,664	-				+1.5
4,261,671	-				-0.9
4,261,799	-		DZA65_RS19685	0.15	-0.4
4,262,272	+		DZA65_RS19685	0.65	-1.1
4,262,338	-				+0.9
4,262,338	-		DZA65_RS19685	0.72	-0.1
4,262,368	+		DZA65_RS19685	0.75	+1.5
4,262,632	-				+0.3
4,262,642	+				-0.1
4,262,642	+				-2.0
4,262,642	+				+0.5
4,262,642	+				+0.2
4,262,642	+				+1.5
4,262,642	+				+0.2
4,262,642	+				-0.5
4,262,642	+				-1.1
4,262,642	+				+0.2
4,262,642	+				-0.1
4,262,642	+				-0.8
4,262,642	+				-0.6
4,262,642	+				-0.2
4,262,642	+				-0.6
4,262,643	-				+0.5
4,262,643	-				-0.5
4,262,643	-				+0.5
4,262,643	-				-0.3
4,262,643	-				+0.2
4,262,643	-				+0.3
4,262,643	-				+0.8
4,262,643	-				+1.5
4,262,643	-				+1.2
4,262,643	-				-0.5
4,262,643	-				-0.3
4,262,643	-				-0.3
4,262,643	-				-0.1
4,262,643	-				+0.4
4,262,643	-				+0.2
4,262,643	-				-0.2
4,262,643	-				+0.6
4,262,643	-				-0.6
4,262,643	-				-0.5
4,262,643	-				-0.2
4,262,643	-				-0.4
4,262,643	-				+1.7
4,262,643	-				+0.3
4,262,643	-				-1.7
4,262,644	+				-1.5
4,262,644	+				+2.5
4,262,644	+				+0.4
4,262,644	+				+0.5
4,262,644	+				-0.6
4,262,644	+				-0.6
4,262,645	-				-1.0
4,262,645	-				-0.9
4,262,692	+				+0.6
4,262,692	+				+0.2
4,262,693	-				-1.5
4,262,693	-				-0.5
4,262,710	+				-1.0
4,262,710	+				+0.5
4,262,711	-				-2.0
4,262,810	+		DZA65_RS19690	0.11	-0.7
4,262,810	+		DZA65_RS19690	0.11	-0.7
4,262,816	-		DZA65_RS19690	0.11	-0.1
4,262,816	-		DZA65_RS19690	0.11	-0.8
4,262,816	-		DZA65_RS19690	0.11	-0.5
4,262,816	-		DZA65_RS19690	0.11	-0.3
4,262,816	-		DZA65_RS19690	0.11	-1.5
4,262,860	+		DZA65_RS19690	0.14	-0.7
4,262,861	-		DZA65_RS19690	0.14	+0.4
4,262,880	+		DZA65_RS19690	0.15	-1.3
4,262,881	-		DZA65_RS19690	0.15	+0.2
4,262,908	+		DZA65_RS19690	0.16	-0.3
4,262,909	-		DZA65_RS19690	0.16	-0.4
4,262,909	-		DZA65_RS19690	0.16	-1.5
4,262,909	-		DZA65_RS19690	0.16	-1.8
4,263,053	+		DZA65_RS19690	0.24	-0.5
4,263,098	+		DZA65_RS19690	0.26	-1.0
4,263,098	+		DZA65_RS19690	0.26	-0.2
4,263,113	+		DZA65_RS19690	0.27	-0.2
4,263,113	+		DZA65_RS19690	0.27	-0.0
4,263,113	+		DZA65_RS19690	0.27	+0.8
4,263,113	+		DZA65_RS19690	0.27	-1.0
4,263,114	-		DZA65_RS19690	0.27	-1.2
4,263,114	-		DZA65_RS19690	0.27	+0.7
4,263,114	-		DZA65_RS19690	0.27	+0.4
4,263,125	+		DZA65_RS19690	0.27	+0.1
4,263,125	+		DZA65_RS19690	0.27	-1.6
4,263,226	-		DZA65_RS19690	0.33	-0.5
4,263,226	-		DZA65_RS19690	0.33	-1.2
4,263,286	+		DZA65_RS19690	0.36	+1.9
4,263,286	+		DZA65_RS19690	0.36	-2.1
4,263,287	-		DZA65_RS19690	0.36	-1.1
4,263,287	-		DZA65_RS19690	0.36	+1.3
4,263,287	-		DZA65_RS19690	0.36	-1.2
4,263,336	+		DZA65_RS19690	0.38	-0.5
4,263,336	+		DZA65_RS19690	0.38	-1.1
4,263,336	+		DZA65_RS19690	0.38	-0.8
4,263,336	+		DZA65_RS19690	0.38	-0.5
4,263,336	+		DZA65_RS19690	0.38	-0.9
4,263,337	-		DZA65_RS19690	0.38	-0.4
4,263,337	-		DZA65_RS19690	0.38	-1.7
4,263,337	-		DZA65_RS19690	0.38	+1.6
4,263,337	-		DZA65_RS19690	0.38	+0.9
4,263,337	-		DZA65_RS19690	0.38	-0.7
4,263,337	-		DZA65_RS19690	0.38	+0.5
4,263,338	+		DZA65_RS19690	0.38	+1.2
4,263,338	+		DZA65_RS19690	0.38	-0.4
4,263,338	+		DZA65_RS19690	0.38	+0.3
4,263,339	-		DZA65_RS19690	0.39	-0.7
4,263,339	-		DZA65_RS19690	0.39	-0.8
4,263,339	-		DZA65_RS19690	0.39	+0.3
4,263,339	-		DZA65_RS19690	0.39	-0.1
4,263,339	-		DZA65_RS19690	0.39	+0.5
4,263,560	+		DZA65_RS19690	0.50	+0.6
4,263,561	-		DZA65_RS19690	0.50	-0.5
4,263,561	-		DZA65_RS19690	0.50	-0.6
4,263,561	-		DZA65_RS19690	0.50	+0.5
4,263,561	-		DZA65_RS19690	0.50	+2.1
4,263,564	+		DZA65_RS19690	0.50	-0.8
4,263,565	-		DZA65_RS19690	0.50	-0.1
4,263,565	-		DZA65_RS19690	0.50	-1.4