Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19295

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,168,877	+		DZA65_RS19285	0.50	-0.4
4,168,912	+		DZA65_RS19285	0.54	+0.3
4,168,912	+		DZA65_RS19285	0.54	-1.7
4,168,912	+		DZA65_RS19285	0.54	+1.5
4,168,912	+		DZA65_RS19285	0.54	-0.1
4,168,913	-		DZA65_RS19285	0.54	-1.0
4,168,913	-		DZA65_RS19285	0.54	-1.3
4,168,913	-		DZA65_RS19285	0.54	+0.1
4,168,913	-		DZA65_RS19285	0.54	-1.0
4,168,913	-		DZA65_RS19285	0.54	+0.7
4,168,913	-		DZA65_RS19285	0.54	+0.5
4,168,916	+		DZA65_RS19285	0.55	-0.4
4,168,916	+		DZA65_RS19285	0.55	-0.2
4,168,916	+		DZA65_RS19285	0.55	+0.5
4,168,917	-		DZA65_RS19285	0.55	+1.7
4,168,917	-		DZA65_RS19285	0.55	-0.8
4,168,937	-		DZA65_RS19285	0.57	-1.3
4,168,954	+		DZA65_RS19285	0.59	+0.5
4,168,955	-		DZA65_RS19285	0.59	-0.1
4,168,961	+		DZA65_RS19285	0.60	+0.0
4,169,072	+		DZA65_RS19285	0.73	+1.1
4,169,072	+		DZA65_RS19285	0.73	-0.3
4,169,073	-		DZA65_RS19285	0.73	+1.5
4,169,073	-		DZA65_RS19285	0.73	+0.7
4,169,073	-		DZA65_RS19285	0.73	+1.2
4,169,073	-		DZA65_RS19285	0.73	+0.5
4,169,075	-		DZA65_RS19285	0.73	-0.8
4,169,075	-		DZA65_RS19285	0.73	+1.3
4,169,126	-		DZA65_RS19285	0.79	+0.2
4,169,153	-		DZA65_RS19285	0.82	+0.3
4,169,225	+				-0.1
4,169,226	-				+0.0
4,169,227	+				-0.1
4,169,227	+				-0.5
4,169,228	-				+0.7
4,169,256	-				-2.0
4,169,304	-				-0.5
4,169,306	+				-0.6
4,169,383	-		DZA65_RS19290	0.13	-0.1
4,169,419	-		DZA65_RS19290	0.19	-0.2
4,169,709	+		DZA65_RS19290	0.71	+0.8
4,169,775	+		DZA65_RS19290	0.82	-0.0
4,169,776	-		DZA65_RS19290	0.82	-1.7
4,169,887	+				-0.3
4,169,923	+				-1.6
4,169,924	-				+1.5
4,169,924	-				+0.6
4,169,966	-		DZA65_RS19295	0.12	-0.9
4,169,966	-		DZA65_RS19295	0.12	-0.4
4,169,968	+		DZA65_RS19295	0.12	-0.4
4,169,969	-		DZA65_RS19295	0.12	-0.1
4,169,971	+		DZA65_RS19295	0.12	-1.0
4,169,972	-		DZA65_RS19295	0.12	+0.0
4,170,005	-		DZA65_RS19295	0.17	-1.1
4,170,060	+		DZA65_RS19295	0.24	-0.4
4,170,073	+		DZA65_RS19295	0.26	+0.1
4,170,094	-		DZA65_RS19295	0.28	-1.5
4,170,168	-		DZA65_RS19295	0.38	+0.0
4,170,262	-		DZA65_RS19295	0.50	-0.2
4,170,292	-		DZA65_RS19295	0.54	-0.9
4,170,303	-		DZA65_RS19295	0.55	-0.5
4,170,359	-		DZA65_RS19295	0.63	-0.7
4,170,435	-		DZA65_RS19295	0.73	-1.9
4,170,465	-		DZA65_RS19295	0.77	-1.0
4,170,692	+				+1.7
4,170,783	-		DZA65_RS19300	0.15	+0.8
4,170,783	-		DZA65_RS19300	0.15	-0.7
4,170,788	+		DZA65_RS19300	0.16	-0.1
4,170,815	-		DZA65_RS19300	0.22	+0.5
4,170,815	-		DZA65_RS19300	0.22	+0.1
4,170,815	-		DZA65_RS19300	0.22	-0.1
4,170,892	+		DZA65_RS19300	0.38	-0.1
4,171,067	-		DZA65_RS19300	0.74	+0.1
4,171,103	+		DZA65_RS19300	0.82	-2.0
4,171,175	-				-0.1
4,171,223	-				+0.2
4,171,244	+				-0.9
4,171,272	+				+0.5
4,171,273	-				+0.4
4,171,273	-				+0.1
4,171,285	+				+0.4
4,171,316	+				-0.0
4,171,317	-				+0.5
4,171,318	+				+0.2
4,171,319	-				+0.5
4,171,321	-				+0.4
4,171,341	+				-1.5
4,171,341	+				+0.1
4,171,342	-				-0.3
4,171,342	-				+1.1
4,171,350	+				-0.0
4,171,350	+				-0.3
4,171,350	+				-0.9
4,171,350	+				+0.1
4,171,350	+				+1.3
4,171,350	+				-0.5
4,171,350	+				-0.1
4,171,351	-				+0.6
4,171,351	-				-0.3
4,171,351	-				+0.2
4,171,351	-				+0.1
4,171,351	-				-0.8
4,171,351	-				+1.5
4,171,401	+				-1.2
4,171,402	-				-0.2
4,171,402	-				-0.5
4,171,515	+				-1.3
4,171,548	+				+0.0
4,171,548	+				-1.1
4,171,548	+				-0.5
4,171,548	+				-1.2
4,171,549	-				-0.1
4,171,626	-		DZA65_RS19305	0.11	-0.3
4,171,637	+		DZA65_RS19305	0.11	-0.3
4,171,637	+		DZA65_RS19305	0.11	-1.1
4,171,638	-		DZA65_RS19305	0.11	+1.1
4,171,638	-		DZA65_RS19305	0.11	-0.5