Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18920

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,085,119	+				-0.1
4,085,119	+				+1.2
4,085,119	+				+0.5
4,085,120	-				+0.2
4,085,120	-				-0.1
4,085,120	-				+0.4
4,085,120	-				+1.1
4,085,136	-				+0.4
4,085,236	+				-0.7
4,085,236	+				+0.2
4,085,236	+				+0.2
4,085,236	+				+0.6
4,085,236	+				+0.1
4,085,237	-				+0.7
4,085,237	-				-0.3
4,085,402	-		DZA65_RS18915	0.17	+0.4
4,085,405	+		DZA65_RS18915	0.18	-0.4
4,085,405	+		DZA65_RS18915	0.18	+0.0
4,085,405	+		DZA65_RS18915	0.18	-0.6
4,085,406	-		DZA65_RS18915	0.18	-0.4
4,085,406	-		DZA65_RS18915	0.18	+0.5
4,085,406	-		DZA65_RS18915	0.18	-0.4
4,085,406	-		DZA65_RS18915	0.18	-0.3
4,085,406	-		DZA65_RS18915	0.18	-0.3
4,085,406	-		DZA65_RS18915	0.18	-0.9
4,085,525	+		DZA65_RS18915	0.32	-0.9
4,085,628	+		DZA65_RS18915	0.44	+1.0
4,085,628	+		DZA65_RS18915	0.44	-1.0
4,085,629	-		DZA65_RS18915	0.45	+0.1
4,085,629	-		DZA65_RS18915	0.45	-0.5
4,085,727	-		DZA65_RS18915	0.56	-0.4
4,085,789	+				-0.6
4,085,996	-		DZA65_RS18915	0.89	+0.2
4,086,039	+				-0.6
4,086,045	+				+0.2
4,086,046	-				-0.2
4,086,046	-				-0.6
4,086,056	+				-0.3
4,086,056	+				+0.2
4,086,056	+				-0.1
4,086,057	-				+1.9
4,086,057	-				+0.4
4,086,057	-				+0.0
4,086,057	-				-1.4
4,086,083	+				-0.8
4,086,083	+				-0.9
4,086,084	-				-0.5
4,086,084	-				-0.1
4,086,100	-				+0.1
4,086,112	+				-1.8
4,086,113	-				+0.3
4,086,113	-				-0.2
4,086,146	+				+1.0
4,086,147	-				-1.5
4,086,255	+		DZA65_RS18920	0.14	-0.1
4,086,256	+		DZA65_RS18920	0.14	+0.9
4,086,257	-		DZA65_RS18920	0.15	-0.9
4,086,257	-		DZA65_RS18920	0.15	+2.0
4,086,299	-		DZA65_RS18920	0.19	-1.1
4,086,332	-		DZA65_RS18920	0.22	-0.2
4,086,343	+		DZA65_RS18920	0.23	-0.6
4,086,590	+		DZA65_RS18920	0.49	+0.4
4,086,597	-		DZA65_RS18920	0.49	-1.7
4,086,599	+		DZA65_RS18920	0.49	+0.0
4,086,600	-		DZA65_RS18920	0.50	-1.7
4,086,626	+		DZA65_RS18920	0.52	+0.6
4,086,628	+		DZA65_RS18920	0.52	-1.6
4,086,628	+		DZA65_RS18920	0.52	-1.7
4,086,628	+		DZA65_RS18920	0.52	-1.1
4,086,629	-		DZA65_RS18920	0.52	-0.6
4,086,629	-		DZA65_RS18920	0.52	+0.1
4,086,629	-		DZA65_RS18920	0.52	+0.1
4,086,629	-				+1.0
4,086,750	+		DZA65_RS18920	0.65	-0.9
4,086,751	-		DZA65_RS18920	0.65	+0.4
4,087,071	-				+0.4
4,087,083	-				-0.6
4,087,121	-				-0.9
4,087,301	+		DZA65_RS18925	0.17	+0.6
4,087,301	+		DZA65_RS18925	0.17	+1.2
4,087,301	+		DZA65_RS18925	0.17	+0.1
4,087,302	-		DZA65_RS18925	0.17	-0.1
4,087,302	-		DZA65_RS18925	0.17	-1.6
4,087,302	-		DZA65_RS18925	0.17	-0.7
4,087,302	-		DZA65_RS18925	0.17	-0.7
4,087,435	-		DZA65_RS18925	0.27	-0.2
4,087,515	+		DZA65_RS18925	0.33	+0.4
4,087,743	+		DZA65_RS18925	0.51	-2.0
4,087,744	-		DZA65_RS18925	0.51	-0.2
4,087,744	-		DZA65_RS18925	0.51	-0.6
4,087,746	+		DZA65_RS18925	0.51	+1.7
4,087,746	+		DZA65_RS18925	0.51	+0.4
4,087,746	+		DZA65_RS18925	0.51	+0.2
4,087,746	+		DZA65_RS18925	0.51	-1.5
4,087,746	+		DZA65_RS18925	0.51	-1.0
4,087,746	+				-0.6
4,087,746	+		DZA65_RS18925	0.51	+0.4
4,087,746	+		DZA65_RS18925	0.51	+0.3
4,087,746	+		DZA65_RS18925	0.51	+1.4
4,087,746	+		DZA65_RS18925	0.51	+0.3
4,087,746	+		DZA65_RS18925	0.51	-0.6
4,087,747	-		DZA65_RS18925	0.51	-0.6
4,087,747	-		DZA65_RS18925	0.51	-1.3
4,087,747	-		DZA65_RS18925	0.51	-0.6
4,087,747	-		DZA65_RS18925	0.51	-0.7
4,087,780	+				+0.9
4,087,792	+		DZA65_RS18925	0.55	-1.7
4,087,852	+		DZA65_RS18925	0.59	+0.7
4,087,852	+		DZA65_RS18925	0.59	+1.1
4,087,852	+		DZA65_RS18925	0.59	-0.2
4,087,853	-		DZA65_RS18925	0.60	-2.0
4,087,853	-		DZA65_RS18925	0.60	-0.7
4,087,918	+		DZA65_RS18925	0.65	-0.9
4,087,918	+		DZA65_RS18925	0.65	-1.3
4,087,965	+		DZA65_RS18925	0.68	-0.9